Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1300 and B158DRAFT_1301 overlap by 1 nucleotides B158DRAFT_1301 and B158DRAFT_1302 are separated by 2 nucleotides B158DRAFT_1302 and B158DRAFT_1303 are separated by 93 nucleotides
B158DRAFT_1300: B158DRAFT_1300 - Kef-type potassium/proton antiporter accessory protein, CPA2 family (TC 2.A.37.1), at 1,346,407 to 1,346,970
_1300
B158DRAFT_1301: B158DRAFT_1301 - Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1), at 1,346,970 to 1,348,859
_1301
B158DRAFT_1302: B158DRAFT_1302 - ABC-type uncharacterized transport system, permease component, at 1,348,862 to 1,349,578
_1302
B158DRAFT_1303: B158DRAFT_1303 - Pirin-related protein, at 1,349,672 to 1,350,544
_1303
Position (kb)
1346
1347
1348
1349 Strain fitness (log2 ratio)
-2
-1
0
1 at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.980 kb on - strand at 1346.170 kb on + strand at 1346.246 kb on + strand at 1346.246 kb on + strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.419 kb on + strand at 1346.496 kb on + strand, within B158DRAFT_1300 at 1346.560 kb on + strand, within B158DRAFT_1300 at 1346.621 kb on + strand, within B158DRAFT_1300 at 1346.629 kb on - strand, within B158DRAFT_1300 at 1346.629 kb on - strand, within B158DRAFT_1300 at 1346.632 kb on - strand, within B158DRAFT_1300 at 1346.642 kb on - strand, within B158DRAFT_1300 at 1346.731 kb on + strand, within B158DRAFT_1300 at 1346.793 kb on + strand, within B158DRAFT_1300 at 1346.801 kb on - strand, within B158DRAFT_1300 at 1346.801 kb on - strand, within B158DRAFT_1300 at 1346.837 kb on + strand, within B158DRAFT_1300 at 1346.837 kb on + strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.876 kb on - strand, within B158DRAFT_1300 at 1346.879 kb on + strand, within B158DRAFT_1300 at 1346.906 kb on + strand, within B158DRAFT_1300 at 1346.906 kb on + strand, within B158DRAFT_1300 at 1346.912 kb on - strand, within B158DRAFT_1300 at 1346.912 kb on - strand, within B158DRAFT_1300 at 1346.914 kb on + strand at 1346.914 kb on + strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.927 kb on + strand at 1347.018 kb on + strand at 1347.026 kb on - strand at 1347.036 kb on - strand at 1347.036 kb on - strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.066 kb on - strand at 1347.066 kb on - strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.138 kb on + strand at 1347.146 kb on - strand at 1347.187 kb on + strand, within B158DRAFT_1301 at 1347.187 kb on + strand, within B158DRAFT_1301 at 1347.195 kb on - strand, within B158DRAFT_1301 at 1347.195 kb on - strand, within B158DRAFT_1301 at 1347.240 kb on - strand, within B158DRAFT_1301 at 1347.276 kb on - strand, within B158DRAFT_1301 at 1347.317 kb on - strand, within B158DRAFT_1301 at 1347.326 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.482 kb on + strand, within B158DRAFT_1301 at 1347.490 kb on - strand, within B158DRAFT_1301 at 1347.531 kb on + strand, within B158DRAFT_1301 at 1347.571 kb on - strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.690 kb on - strand, within B158DRAFT_1301 at 1347.695 kb on - strand, within B158DRAFT_1301 at 1347.742 kb on + strand, within B158DRAFT_1301 at 1347.776 kb on + strand, within B158DRAFT_1301 at 1347.777 kb on - strand, within B158DRAFT_1301 at 1347.996 kb on - strand, within B158DRAFT_1301 at 1348.030 kb on + strand, within B158DRAFT_1301 at 1348.030 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.038 kb on - strand, within B158DRAFT_1301 at 1348.038 kb on - strand, within B158DRAFT_1301 at 1348.043 kb on - strand, within B158DRAFT_1301 at 1348.084 kb on + strand, within B158DRAFT_1301 at 1348.097 kb on - strand, within B158DRAFT_1301 at 1348.221 kb on + strand, within B158DRAFT_1301 at 1348.254 kb on - strand, within B158DRAFT_1301 at 1348.262 kb on + strand, within B158DRAFT_1301 at 1348.291 kb on + strand, within B158DRAFT_1301 at 1348.314 kb on - strand, within B158DRAFT_1301 at 1348.401 kb on - strand, within B158DRAFT_1301 at 1348.427 kb on + strand, within B158DRAFT_1301 at 1348.435 kb on + strand, within B158DRAFT_1301 at 1348.442 kb on + strand, within B158DRAFT_1301 at 1348.443 kb on - strand, within B158DRAFT_1301 at 1348.443 kb on - strand, within B158DRAFT_1301 at 1348.450 kb on - strand, within B158DRAFT_1301 at 1348.482 kb on + strand, within B158DRAFT_1301 at 1348.490 kb on - strand, within B158DRAFT_1301 at 1348.490 kb on - strand, within B158DRAFT_1301 at 1348.500 kb on - strand, within B158DRAFT_1301 at 1348.508 kb on - strand, within B158DRAFT_1301 at 1348.512 kb on + strand, within B158DRAFT_1301 at 1348.558 kb on + strand, within B158DRAFT_1301 at 1348.577 kb on - strand, within B158DRAFT_1301 at 1348.747 kb on - strand at 1348.756 kb on + strand at 1348.761 kb on + strand at 1348.769 kb on - strand at 1348.777 kb on + strand at 1348.793 kb on + strand at 1348.894 kb on + strand at 1348.944 kb on + strand, within B158DRAFT_1302 at 1348.947 kb on + strand, within B158DRAFT_1302 at 1348.961 kb on + strand, within B158DRAFT_1302 at 1349.020 kb on + strand, within B158DRAFT_1302 at 1349.023 kb on - strand, within B158DRAFT_1302 at 1349.068 kb on - strand, within B158DRAFT_1302 at 1349.108 kb on + strand, within B158DRAFT_1302 at 1349.151 kb on - strand, within B158DRAFT_1302 at 1349.161 kb on + strand, within B158DRAFT_1302 at 1349.161 kb on - strand, within B158DRAFT_1302 at 1349.169 kb on - strand, within B158DRAFT_1302 at 1349.288 kb on - strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.308 kb on - strand, within B158DRAFT_1302 at 1349.308 kb on - strand, within B158DRAFT_1302 at 1349.347 kb on + strand, within B158DRAFT_1302 at 1349.356 kb on + strand, within B158DRAFT_1302 at 1349.388 kb on - strand, within B158DRAFT_1302 at 1349.558 kb on - strand at 1349.565 kb on - strand at 1349.567 kb on + strand at 1349.572 kb on + strand at 1349.580 kb on - strand at 1349.590 kb on - strand at 1349.646 kb on + strand at 1349.653 kb on + strand at 1349.654 kb on - strand at 1349.654 kb on - strand at 1349.661 kb on - strand at 1349.661 kb on - strand at 1349.730 kb on + strand at 1349.738 kb on + strand at 1349.842 kb on - strand, within B158DRAFT_1303
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,345,976 - -1.3 1,345,976 - -0.7 1,345,976 - -1.7 1,345,976 - -2.4 1,345,980 - -1.4 1,346,170 + -1.8 1,346,246 + -2.7 1,346,246 + -2.0 1,346,371 - -0.4 1,346,371 - -1.3 1,346,371 - -0.6 1,346,371 - -0.5 1,346,419 + -0.6 1,346,496 + B158DRAFT_1300 0.16 -0.4 1,346,560 + B158DRAFT_1300 0.27 -0.1 1,346,621 + B158DRAFT_1300 0.38 -0.7 1,346,629 - B158DRAFT_1300 0.39 +0.3 1,346,629 - B158DRAFT_1300 0.39 -1.4 1,346,632 - B158DRAFT_1300 0.40 -0.1 1,346,642 - B158DRAFT_1300 0.42 -0.2 1,346,731 + B158DRAFT_1300 0.57 +0.1 1,346,793 + B158DRAFT_1300 0.68 +0.5 1,346,801 - B158DRAFT_1300 0.70 +0.4 1,346,801 - B158DRAFT_1300 0.70 -0.3 1,346,837 + B158DRAFT_1300 0.76 +0.1 1,346,837 + B158DRAFT_1300 0.76 -0.1 1,346,845 - B158DRAFT_1300 0.78 -0.4 1,346,845 - B158DRAFT_1300 0.78 -0.1 1,346,845 - B158DRAFT_1300 0.78 -0.2 1,346,845 - B158DRAFT_1300 0.78 -0.6 1,346,876 - B158DRAFT_1300 0.83 -0.6 1,346,879 + B158DRAFT_1300 0.84 -1.5 1,346,906 + B158DRAFT_1300 0.88 -0.3 1,346,906 + B158DRAFT_1300 0.88 -0.2 1,346,912 - B158DRAFT_1300 0.90 +0.2 1,346,912 - B158DRAFT_1300 0.90 -0.1 1,346,914 + -0.1 1,346,914 + -1.0 1,346,914 - -0.3 1,346,914 - -0.4 1,346,914 - +0.2 1,346,914 - -0.1 1,346,914 - +0.3 1,346,922 - -0.3 1,346,922 - -0.6 1,346,922 - +0.6 1,346,922 - +0.9 1,346,927 + -2.5 1,347,018 + +0.0 1,347,026 - +0.4 1,347,036 - -1.1 1,347,036 - -0.1 1,347,051 + -0.7 1,347,051 + -0.1 1,347,051 + -0.4 1,347,051 + -0.1 1,347,051 + -0.5 1,347,051 + +0.7 1,347,059 - +0.0 1,347,059 - -0.7 1,347,059 - -0.8 1,347,059 - -0.8 1,347,059 - +0.6 1,347,059 - -1.0 1,347,066 - +0.3 1,347,066 - -0.0 1,347,121 + -0.1 1,347,121 + -0.1 1,347,121 + -0.7 1,347,121 + -0.4 1,347,121 + -0.0 1,347,138 + +0.7 1,347,146 - -1.0 1,347,187 + B158DRAFT_1301 0.11 +0.1 1,347,187 + B158DRAFT_1301 0.11 +0.2 1,347,195 - B158DRAFT_1301 0.12 -0.8 1,347,195 - B158DRAFT_1301 0.12 +0.4 1,347,240 - B158DRAFT_1301 0.14 +0.1 1,347,276 - B158DRAFT_1301 0.16 -0.5 1,347,317 - B158DRAFT_1301 0.18 -0.3 1,347,326 + B158DRAFT_1301 0.19 -0.2 1,347,395 + B158DRAFT_1301 0.22 -0.3 1,347,395 + B158DRAFT_1301 0.22 +0.1 1,347,395 + B158DRAFT_1301 0.22 -0.1 1,347,403 - B158DRAFT_1301 0.23 -0.5 1,347,403 - B158DRAFT_1301 0.23 -0.3 1,347,403 - B158DRAFT_1301 0.23 -0.7 1,347,482 + B158DRAFT_1301 0.27 +0.2 1,347,490 - B158DRAFT_1301 0.28 -0.8 1,347,531 + B158DRAFT_1301 0.30 +0.1 1,347,571 - B158DRAFT_1301 0.32 -0.7 1,347,682 + B158DRAFT_1301 0.38 -0.5 1,347,682 + B158DRAFT_1301 0.38 -0.1 1,347,682 + B158DRAFT_1301 0.38 +0.3 1,347,682 + B158DRAFT_1301 0.38 +0.2 1,347,690 - B158DRAFT_1301 0.38 -0.4 1,347,695 - B158DRAFT_1301 0.38 -0.1 1,347,742 + B158DRAFT_1301 0.41 -1.7 1,347,776 + B158DRAFT_1301 0.43 -0.6 1,347,777 - B158DRAFT_1301 0.43 -0.8 1,347,996 - B158DRAFT_1301 0.54 -0.7 1,348,030 + B158DRAFT_1301 0.56 -1.2 1,348,030 + B158DRAFT_1301 0.56 -0.0 1,348,035 + B158DRAFT_1301 0.56 +0.1 1,348,035 + B158DRAFT_1301 0.56 +0.1 1,348,035 + B158DRAFT_1301 0.56 -0.1 1,348,038 - B158DRAFT_1301 0.57 -0.4 1,348,038 - B158DRAFT_1301 0.57 +0.1 1,348,043 - B158DRAFT_1301 0.57 -0.4 1,348,084 + B158DRAFT_1301 0.59 -0.7 1,348,097 - B158DRAFT_1301 0.60 -0.9 1,348,221 + B158DRAFT_1301 0.66 -1.5 1,348,254 - B158DRAFT_1301 0.68 -0.0 1,348,262 + B158DRAFT_1301 0.68 -0.3 1,348,291 + B158DRAFT_1301 0.70 -0.2 1,348,314 - B158DRAFT_1301 0.71 -0.0 1,348,401 - B158DRAFT_1301 0.76 -0.8 1,348,427 + B158DRAFT_1301 0.77 -0.1 1,348,435 + B158DRAFT_1301 0.78 +0.1 1,348,442 + B158DRAFT_1301 0.78 -0.2 1,348,443 - B158DRAFT_1301 0.78 +0.2 1,348,443 - B158DRAFT_1301 0.78 -0.5 1,348,450 - B158DRAFT_1301 0.78 -0.4 1,348,482 + B158DRAFT_1301 0.80 -0.0 1,348,490 - B158DRAFT_1301 0.80 -0.1 1,348,490 - B158DRAFT_1301 0.80 -1.2 1,348,500 - B158DRAFT_1301 0.81 +0.3 1,348,508 - B158DRAFT_1301 0.81 +0.4 1,348,512 + B158DRAFT_1301 0.82 -0.3 1,348,558 + B158DRAFT_1301 0.84 -0.2 1,348,577 - B158DRAFT_1301 0.85 +0.3 1,348,747 - -0.4 1,348,756 + -0.1 1,348,761 + -0.3 1,348,769 - +0.1 1,348,777 + -0.1 1,348,793 + +0.3 1,348,894 + -1.1 1,348,944 + B158DRAFT_1302 0.11 -0.4 1,348,947 + B158DRAFT_1302 0.12 -0.7 1,348,961 + B158DRAFT_1302 0.14 -0.3 1,349,020 + B158DRAFT_1302 0.22 +0.2 1,349,023 - B158DRAFT_1302 0.22 -0.1 1,349,068 - B158DRAFT_1302 0.29 -1.4 1,349,108 + B158DRAFT_1302 0.34 -0.8 1,349,151 - B158DRAFT_1302 0.40 +0.5 1,349,161 + B158DRAFT_1302 0.42 +0.1 1,349,161 - B158DRAFT_1302 0.42 -1.5 1,349,169 - B158DRAFT_1302 0.43 -0.6 1,349,288 - B158DRAFT_1302 0.59 -0.3 1,349,300 + B158DRAFT_1302 0.61 -0.4 1,349,300 + B158DRAFT_1302 0.61 -0.3 1,349,300 + B158DRAFT_1302 0.61 +0.2 1,349,300 + B158DRAFT_1302 0.61 +0.9 1,349,308 - B158DRAFT_1302 0.62 +0.4 1,349,308 - B158DRAFT_1302 0.62 -0.7 1,349,347 + B158DRAFT_1302 0.68 -0.9 1,349,356 + B158DRAFT_1302 0.69 +0.4 1,349,388 - B158DRAFT_1302 0.73 -0.3 1,349,558 - +0.5 1,349,565 - +0.1 1,349,567 + -0.0 1,349,572 + -0.6 1,349,580 - +0.0 1,349,590 - +0.3 1,349,646 + +0.1 1,349,653 + +0.3 1,349,654 - -0.4 1,349,654 - +0.1 1,349,661 - +0.0 1,349,661 - +0.9 1,349,730 + +0.1 1,349,738 + -0.4 1,349,842 - B158DRAFT_1303 0.19 -0.3
Or see this region's nucleotide sequence