Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1269

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1268 and B158DRAFT_1269 are separated by 11 nucleotidesB158DRAFT_1269 and B158DRAFT_1270 are separated by 371 nucleotides B158DRAFT_1268: B158DRAFT_1268 - Adenine specific DNA methylase Mod, at 1,304,958 to 1,308,023 _1268 B158DRAFT_1269: B158DRAFT_1269 - Type III restriction enzyme, res subunit., at 1,308,035 to 1,311,379 _1269 B158DRAFT_1270: B158DRAFT_1270 - Outer membrane receptor proteins, mostly Fe transport, at 1,311,751 to 1,313,817 _1270 Position (kb) 1308 1309 1310 1311 1312Strain fitness (log2 ratio) -2 -1 0 1at 1307.175 kb on + strand, within B158DRAFT_1268at 1307.183 kb on - strand, within B158DRAFT_1268at 1307.254 kb on + strand, within B158DRAFT_1268at 1307.368 kb on - strand, within B158DRAFT_1268at 1307.368 kb on - strand, within B158DRAFT_1268at 1307.375 kb on - strand, within B158DRAFT_1268at 1307.539 kb on - strand, within B158DRAFT_1268at 1307.544 kb on - strand, within B158DRAFT_1268at 1307.554 kb on + strand, within B158DRAFT_1268at 1307.581 kb on - strand, within B158DRAFT_1268at 1307.756 kb on + strandat 1307.878 kb on + strandat 1308.006 kb on + strandat 1308.164 kb on + strandat 1308.555 kb on + strand, within B158DRAFT_1269at 1308.673 kb on - strand, within B158DRAFT_1269at 1308.858 kb on - strand, within B158DRAFT_1269at 1308.860 kb on + strand, within B158DRAFT_1269at 1308.868 kb on - strand, within B158DRAFT_1269at 1308.868 kb on - strand, within B158DRAFT_1269at 1309.662 kb on + strand, within B158DRAFT_1269at 1309.945 kb on + strand, within B158DRAFT_1269at 1309.948 kb on - strand, within B158DRAFT_1269at 1309.948 kb on - strand, within B158DRAFT_1269at 1309.953 kb on - strand, within B158DRAFT_1269at 1309.968 kb on + strand, within B158DRAFT_1269at 1310.087 kb on - strand, within B158DRAFT_1269at 1310.501 kb on + strand, within B158DRAFT_1269at 1310.807 kb on + strand, within B158DRAFT_1269at 1310.970 kb on - strand, within B158DRAFT_1269at 1310.970 kb on - strand, within B158DRAFT_1269at 1310.973 kb on + strand, within B158DRAFT_1269at 1310.987 kb on + strand, within B158DRAFT_1269at 1311.043 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.111 kb on - strandat 1311.113 kb on + strandat 1311.121 kb on - strandat 1311.121 kb on - strandat 1311.121 kb on - strandat 1311.232 kb on - strandat 1311.507 kb on + strandat 1311.552 kb on + strandat 1311.804 kb on + strandat 1311.812 kb on - strandat 1311.834 kb on + strandat 1311.857 kb on - strandat 1311.864 kb on + strandat 1311.931 kb on - strandat 1311.959 kb on + strand, within B158DRAFT_1270at 1311.992 kb on + strand, within B158DRAFT_1270at 1312.045 kb on - strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.112 kb on + strand, within B158DRAFT_1270at 1312.120 kb on - strand, within B158DRAFT_1270at 1312.200 kb on - strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.219 kb on - strand, within B158DRAFT_1270at 1312.219 kb on - strand, within B158DRAFT_1270at 1312.237 kb on + strand, within B158DRAFT_1270at 1312.245 kb on - strand, within B158DRAFT_1270at 1312.275 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,307,175 + B158DRAFT_1268 0.72 -0.2
1,307,183 - B158DRAFT_1268 0.73 +0.6
1,307,254 + B158DRAFT_1268 0.75 -0.2
1,307,368 - B158DRAFT_1268 0.79 +0.1
1,307,368 - B158DRAFT_1268 0.79 +0.5
1,307,375 - B158DRAFT_1268 0.79 +0.9
1,307,539 - B158DRAFT_1268 0.84 -0.3
1,307,544 - B158DRAFT_1268 0.84 +0.3
1,307,554 + B158DRAFT_1268 0.85 +0.3
1,307,581 - B158DRAFT_1268 0.86 -0.5
1,307,756 + +0.1
1,307,878 + +0.2
1,308,006 + +0.4
1,308,164 + +0.4
1,308,555 + B158DRAFT_1269 0.16 -0.3
1,308,673 - B158DRAFT_1269 0.19 -0.2
1,308,858 - B158DRAFT_1269 0.25 -0.2
1,308,860 + B158DRAFT_1269 0.25 -0.2
1,308,868 - B158DRAFT_1269 0.25 +0.3
1,308,868 - B158DRAFT_1269 0.25 +0.4
1,309,662 + B158DRAFT_1269 0.49 -0.2
1,309,945 + B158DRAFT_1269 0.57 +0.4
1,309,948 - B158DRAFT_1269 0.57 +0.3
1,309,948 - B158DRAFT_1269 0.57 -0.6
1,309,953 - B158DRAFT_1269 0.57 +0.4
1,309,968 + B158DRAFT_1269 0.58 +0.5
1,310,087 - B158DRAFT_1269 0.61 +0.3
1,310,501 + B158DRAFT_1269 0.74 +0.1
1,310,807 + B158DRAFT_1269 0.83 -0.0
1,310,970 - B158DRAFT_1269 0.88 -0.4
1,310,970 - B158DRAFT_1269 0.88 -0.0
1,310,973 + B158DRAFT_1269 0.88 -0.2
1,310,987 + B158DRAFT_1269 0.88 -0.2
1,311,043 + B158DRAFT_1269 0.90 -0.2
1,311,044 + B158DRAFT_1269 0.90 -1.1
1,311,044 + B158DRAFT_1269 0.90 -0.0
1,311,044 + B158DRAFT_1269 0.90 -0.5
1,311,052 - -0.4
1,311,052 - +0.3
1,311,052 - -0.1
1,311,052 - -0.2
1,311,111 - +0.2
1,311,113 + +0.0
1,311,121 - -0.3
1,311,121 - +0.1
1,311,121 - -0.4
1,311,232 - -0.6
1,311,507 + +0.4
1,311,552 + +0.0
1,311,804 + -1.2
1,311,812 - -0.8
1,311,834 + -0.8
1,311,857 - -1.5
1,311,864 + -0.5
1,311,931 - -1.1
1,311,959 + B158DRAFT_1270 0.10 -2.2
1,311,992 + B158DRAFT_1270 0.12 -1.5
1,312,045 - B158DRAFT_1270 0.14 -2.6
1,312,087 + B158DRAFT_1270 0.16 -0.7
1,312,087 + B158DRAFT_1270 0.16 -1.4
1,312,087 + B158DRAFT_1270 0.16 -0.8
1,312,087 + B158DRAFT_1270 0.16 -1.0
1,312,087 + B158DRAFT_1270 0.16 -1.0
1,312,087 + B158DRAFT_1270 0.16 -1.5
1,312,087 + B158DRAFT_1270 0.16 -1.5
1,312,087 + B158DRAFT_1270 0.16 -1.0
1,312,087 + B158DRAFT_1270 0.16 -2.1
1,312,095 - B158DRAFT_1270 0.17 -1.3
1,312,095 - B158DRAFT_1270 0.17 -1.0
1,312,095 - B158DRAFT_1270 0.17 -0.9
1,312,095 - B158DRAFT_1270 0.17 -1.9
1,312,095 - B158DRAFT_1270 0.17 -1.4
1,312,095 - B158DRAFT_1270 0.17 -1.9
1,312,095 - B158DRAFT_1270 0.17 -1.5
1,312,095 - B158DRAFT_1270 0.17 -0.6
1,312,095 - B158DRAFT_1270 0.17 -1.2
1,312,095 - B158DRAFT_1270 0.17 -0.9
1,312,095 - B158DRAFT_1270 0.17 -1.6
1,312,112 + B158DRAFT_1270 0.17 -2.0
1,312,120 - B158DRAFT_1270 0.18 -1.0
1,312,200 - B158DRAFT_1270 0.22 -1.6
1,312,211 + B158DRAFT_1270 0.22 -0.9
1,312,211 + B158DRAFT_1270 0.22 -1.0
1,312,211 + B158DRAFT_1270 0.22 -1.3
1,312,211 + B158DRAFT_1270 0.22 -2.0
1,312,211 + B158DRAFT_1270 0.22 -0.8
1,312,211 + B158DRAFT_1270 0.22 -1.7
1,312,211 + B158DRAFT_1270 0.22 -0.6
1,312,211 + B158DRAFT_1270 0.22 -0.4
1,312,211 + B158DRAFT_1270 0.22 -1.0
1,312,219 - B158DRAFT_1270 0.23 -0.6
1,312,219 - B158DRAFT_1270 0.23 -2.6
1,312,237 + B158DRAFT_1270 0.24 -0.2
1,312,245 - B158DRAFT_1270 0.24 -0.3
1,312,275 + B158DRAFT_1270 0.25 -1.3
1,312,363 + B158DRAFT_1270 0.30 -1.2
1,312,363 + B158DRAFT_1270 0.30 -2.0
1,312,363 + B158DRAFT_1270 0.30 -2.1
1,312,363 + B158DRAFT_1270 0.30 -1.4
1,312,363 + B158DRAFT_1270 0.30 -0.9
1,312,371 - B158DRAFT_1270 0.30 -1.5
1,312,371 - B158DRAFT_1270 0.30 -2.0
1,312,371 - B158DRAFT_1270 0.30 -1.2
1,312,371 - B158DRAFT_1270 0.30 -0.0
1,312,371 - B158DRAFT_1270 0.30 -1.2
1,312,371 - B158DRAFT_1270 0.30 -0.6
1,312,371 - B158DRAFT_1270 0.30 -1.5
1,312,371 - B158DRAFT_1270 0.30 -1.7

Or see this region's nucleotide sequence