Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1141 and B158DRAFT_1142 are separated by 36 nucleotides B158DRAFT_1142 and B158DRAFT_1143 overlap by 1 nucleotides B158DRAFT_1143 and B158DRAFT_1144 are separated by 104 nucleotides B158DRAFT_1144 and B158DRAFT_1145 are separated by 56 nucleotides
B158DRAFT_1141: B158DRAFT_1141 - tol-pal system beta propeller repeat protein TolB, at 1,178,947 to 1,180,311
_1141
B158DRAFT_1142: B158DRAFT_1142 - peptidoglycan-associated lipoprotein, at 1,180,348 to 1,180,866
_1142
B158DRAFT_1143: B158DRAFT_1143 - tol-pal system protein YbgF, at 1,180,866 to 1,181,600
_1143
B158DRAFT_1144: B158DRAFT_1144 - Organic radical activating enzymes, at 1,181,705 to 1,182,346
_1144
B158DRAFT_1145: B158DRAFT_1145 - hypothetical protein, at 1,182,403 to 1,182,510
_1145
Position (kb)
1180
1181
1182 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1181.233 kb on + strand, within B158DRAFT_1143 at 1181.291 kb on + strand, within B158DRAFT_1143 at 1181.490 kb on - strand, within B158DRAFT_1143 at 1181.623 kb on - strand at 1181.697 kb on - strand at 1181.697 kb on - strand at 1181.697 kb on - strand at 1181.709 kb on - strand at 1181.711 kb on - strand at 1181.746 kb on + strand at 1181.755 kb on - strand at 1181.756 kb on - strand at 1181.756 kb on - strand at 1181.777 kb on + strand, within B158DRAFT_1144 at 1181.777 kb on + strand, within B158DRAFT_1144 at 1181.785 kb on - strand, within B158DRAFT_1144 at 1181.802 kb on - strand, within B158DRAFT_1144 at 1181.809 kb on - strand, within B158DRAFT_1144 at 1181.895 kb on + strand, within B158DRAFT_1144 at 1181.970 kb on + strand, within B158DRAFT_1144 at 1181.972 kb on + strand, within B158DRAFT_1144 at 1181.978 kb on - strand, within B158DRAFT_1144 at 1182.030 kb on + strand, within B158DRAFT_1144 at 1182.102 kb on + strand, within B158DRAFT_1144 at 1182.112 kb on + strand, within B158DRAFT_1144 at 1182.231 kb on + strand, within B158DRAFT_1144 at 1182.231 kb on + strand, within B158DRAFT_1144 at 1182.231 kb on + strand, within B158DRAFT_1144 at 1182.231 kb on + strand, within B158DRAFT_1144 at 1182.231 kb on + strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.239 kb on - strand, within B158DRAFT_1144 at 1182.241 kb on + strand, within B158DRAFT_1144 at 1182.249 kb on + strand, within B158DRAFT_1144 at 1182.345 kb on + strand at 1182.372 kb on - strand at 1182.467 kb on + strand, within B158DRAFT_1145 at 1182.469 kb on + strand, within B158DRAFT_1145 at 1182.475 kb on - strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on + strand, within B158DRAFT_1145 at 1182.477 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.485 kb on - strand, within B158DRAFT_1145 at 1182.530 kb on + strand at 1182.530 kb on + strand at 1182.530 kb on + strand at 1182.530 kb on + strand at 1182.556 kb on + strand at 1182.556 kb on + strand at 1182.563 kb on + strand at 1182.564 kb on - strand at 1182.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,181,233 + B158DRAFT_1143 0.50 -3.3 1,181,291 + B158DRAFT_1143 0.58 -3.7 1,181,490 - B158DRAFT_1143 0.85 -1.3 1,181,623 - -0.3 1,181,697 - -0.4 1,181,697 - -0.2 1,181,697 - -0.4 1,181,709 - -0.6 1,181,711 - -0.3 1,181,746 + -0.1 1,181,755 - -0.7 1,181,756 - -0.9 1,181,756 - -0.8 1,181,777 + B158DRAFT_1144 0.11 -0.2 1,181,777 + B158DRAFT_1144 0.11 -0.4 1,181,785 - B158DRAFT_1144 0.12 -1.1 1,181,802 - B158DRAFT_1144 0.15 -0.3 1,181,809 - B158DRAFT_1144 0.16 -0.2 1,181,895 + B158DRAFT_1144 0.30 -0.9 1,181,970 + B158DRAFT_1144 0.41 -0.4 1,181,972 + B158DRAFT_1144 0.42 -0.5 1,181,978 - B158DRAFT_1144 0.43 -1.6 1,182,030 + B158DRAFT_1144 0.51 -1.5 1,182,102 + B158DRAFT_1144 0.62 -0.5 1,182,112 + B158DRAFT_1144 0.63 -0.5 1,182,231 + B158DRAFT_1144 0.82 -0.3 1,182,231 + B158DRAFT_1144 0.82 -0.4 1,182,231 + B158DRAFT_1144 0.82 -0.5 1,182,231 + B158DRAFT_1144 0.82 -0.4 1,182,231 + B158DRAFT_1144 0.82 -1.0 1,182,239 - B158DRAFT_1144 0.83 -0.3 1,182,239 - B158DRAFT_1144 0.83 -1.4 1,182,239 - B158DRAFT_1144 0.83 -0.2 1,182,239 - B158DRAFT_1144 0.83 +0.3 1,182,239 - B158DRAFT_1144 0.83 -0.2 1,182,239 - B158DRAFT_1144 0.83 -0.4 1,182,241 + B158DRAFT_1144 0.83 +0.1 1,182,249 + B158DRAFT_1144 0.85 +0.2 1,182,345 + -0.2 1,182,372 - -0.1 1,182,467 + B158DRAFT_1145 0.59 -0.6 1,182,469 + B158DRAFT_1145 0.61 +0.3 1,182,475 - B158DRAFT_1145 0.67 +0.0 1,182,477 + B158DRAFT_1145 0.69 -0.2 1,182,477 + B158DRAFT_1145 0.69 -0.9 1,182,477 + B158DRAFT_1145 0.69 -0.1 1,182,477 + B158DRAFT_1145 0.69 +0.0 1,182,477 + B158DRAFT_1145 0.69 +0.1 1,182,477 + B158DRAFT_1145 0.69 -1.1 1,182,477 + B158DRAFT_1145 0.69 -0.2 1,182,477 + B158DRAFT_1145 0.69 +0.6 1,182,477 + B158DRAFT_1145 0.69 -0.3 1,182,477 + B158DRAFT_1145 0.69 +0.2 1,182,477 + B158DRAFT_1145 0.69 -0.1 1,182,477 + B158DRAFT_1145 0.69 +0.3 1,182,477 - B158DRAFT_1145 0.69 -0.4 1,182,485 - B158DRAFT_1145 0.76 -0.0 1,182,485 - B158DRAFT_1145 0.76 -0.5 1,182,485 - B158DRAFT_1145 0.76 +0.3 1,182,485 - B158DRAFT_1145 0.76 +0.0 1,182,485 - B158DRAFT_1145 0.76 -0.2 1,182,485 - B158DRAFT_1145 0.76 +0.0 1,182,485 - B158DRAFT_1145 0.76 +0.2 1,182,485 - B158DRAFT_1145 0.76 -0.5 1,182,485 - B158DRAFT_1145 0.76 -0.8 1,182,530 + -0.9 1,182,530 + -0.6 1,182,530 + +0.5 1,182,530 + -0.2 1,182,556 + +0.4 1,182,556 + +0.3 1,182,563 + -0.4 1,182,564 - +0.1 1,182,571 - -1.2
Or see this region's nucleotide sequence