Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1020 and B158DRAFT_1021 are separated by 89 nucleotides B158DRAFT_1021 and B158DRAFT_1022 are separated by 168 nucleotides B158DRAFT_1022 and B158DRAFT_1023 are separated by 78 nucleotides B158DRAFT_1023 and B158DRAFT_1024 are separated by 118 nucleotides
B158DRAFT_1020: B158DRAFT_1020 - UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54), at 1,061,372 to 1,062,088
_1020
B158DRAFT_1021: B158DRAFT_1021 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,062,178 to 1,062,693
_1021
B158DRAFT_1022: B158DRAFT_1022 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 1,062,862 to 1,064,259
_1022
B158DRAFT_1023: B158DRAFT_1023 - Helix-turn-helix., at 1,064,338 to 1,065,081
_1023
B158DRAFT_1024: B158DRAFT_1024 - Phosphatidylglycerophosphate synthase, at 1,065,200 to 1,065,790
_1024
Position (kb)
1062
1063
1064
1065 Strain fitness (log2 ratio)
-2
-1
0
1 at 1062.165 kb on - strand at 1062.169 kb on + strand at 1062.177 kb on - strand at 1062.177 kb on - strand at 1062.177 kb on - strand at 1062.182 kb on - strand at 1062.183 kb on - strand at 1062.237 kb on - strand, within B158DRAFT_1021 at 1062.248 kb on - strand, within B158DRAFT_1021 at 1062.291 kb on - strand, within B158DRAFT_1021 at 1062.291 kb on - strand, within B158DRAFT_1021 at 1062.326 kb on - strand, within B158DRAFT_1021 at 1062.327 kb on - strand, within B158DRAFT_1021 at 1062.327 kb on - strand, within B158DRAFT_1021 at 1062.413 kb on - strand, within B158DRAFT_1021 at 1062.415 kb on - strand, within B158DRAFT_1021 at 1062.426 kb on + strand, within B158DRAFT_1021 at 1062.474 kb on - strand, within B158DRAFT_1021 at 1062.528 kb on - strand, within B158DRAFT_1021 at 1062.560 kb on - strand, within B158DRAFT_1021 at 1062.582 kb on - strand, within B158DRAFT_1021 at 1062.606 kb on - strand, within B158DRAFT_1021 at 1062.606 kb on - strand, within B158DRAFT_1021 at 1062.615 kb on - strand, within B158DRAFT_1021 at 1062.616 kb on - strand, within B158DRAFT_1021 at 1062.616 kb on - strand, within B158DRAFT_1021 at 1062.616 kb on - strand, within B158DRAFT_1021 at 1062.616 kb on - strand, within B158DRAFT_1021 at 1062.616 kb on - strand, within B158DRAFT_1021 at 1062.746 kb on - strand at 1062.761 kb on - strand at 1062.761 kb on - strand at 1062.761 kb on - strand at 1062.761 kb on - strand at 1062.761 kb on - strand at 1064.376 kb on + strand at 1064.397 kb on + strand at 1064.397 kb on + strand at 1064.476 kb on - strand, within B158DRAFT_1023 at 1064.476 kb on - strand, within B158DRAFT_1023 at 1064.613 kb on - strand, within B158DRAFT_1023 at 1064.619 kb on - strand, within B158DRAFT_1023 at 1064.767 kb on + strand, within B158DRAFT_1023 at 1064.915 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.996 kb on + strand, within B158DRAFT_1023 at 1064.997 kb on - strand, within B158DRAFT_1023 at 1064.997 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.004 kb on - strand, within B158DRAFT_1023 at 1065.006 kb on + strand, within B158DRAFT_1023 at 1065.029 kb on + strand at 1065.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,062,165 - +0.2 1,062,169 + -2.1 1,062,177 - -0.7 1,062,177 - -0.1 1,062,177 - +0.8 1,062,182 - -1.1 1,062,183 - -0.0 1,062,237 - B158DRAFT_1021 0.11 -0.7 1,062,248 - B158DRAFT_1021 0.14 -0.9 1,062,291 - B158DRAFT_1021 0.22 -0.4 1,062,291 - B158DRAFT_1021 0.22 -0.3 1,062,326 - B158DRAFT_1021 0.29 +0.1 1,062,327 - B158DRAFT_1021 0.29 +0.3 1,062,327 - B158DRAFT_1021 0.29 -0.6 1,062,413 - B158DRAFT_1021 0.46 -0.2 1,062,415 - B158DRAFT_1021 0.46 -0.3 1,062,426 + B158DRAFT_1021 0.48 +0.6 1,062,474 - B158DRAFT_1021 0.57 -0.8 1,062,528 - B158DRAFT_1021 0.68 +0.0 1,062,560 - B158DRAFT_1021 0.74 -2.7 1,062,582 - B158DRAFT_1021 0.78 -0.0 1,062,606 - B158DRAFT_1021 0.83 -1.3 1,062,606 - B158DRAFT_1021 0.83 -0.4 1,062,615 - B158DRAFT_1021 0.85 -0.1 1,062,616 - B158DRAFT_1021 0.85 -0.9 1,062,616 - B158DRAFT_1021 0.85 -1.0 1,062,616 - B158DRAFT_1021 0.85 -0.7 1,062,616 - B158DRAFT_1021 0.85 -0.8 1,062,616 - B158DRAFT_1021 0.85 -0.6 1,062,746 - +0.9 1,062,761 - -0.9 1,062,761 - -1.3 1,062,761 - +0.2 1,062,761 - -0.4 1,062,761 - -0.6 1,064,376 + +0.0 1,064,397 + -0.3 1,064,397 + -0.1 1,064,476 - B158DRAFT_1023 0.19 -0.6 1,064,476 - B158DRAFT_1023 0.19 +0.2 1,064,613 - B158DRAFT_1023 0.37 -0.7 1,064,619 - B158DRAFT_1023 0.38 +0.3 1,064,767 + B158DRAFT_1023 0.58 +0.1 1,064,915 + B158DRAFT_1023 0.78 -0.4 1,064,996 + B158DRAFT_1023 0.88 -0.2 1,064,996 + B158DRAFT_1023 0.88 -0.6 1,064,996 + B158DRAFT_1023 0.88 -0.0 1,064,996 + B158DRAFT_1023 0.88 -0.6 1,064,997 - B158DRAFT_1023 0.89 -0.3 1,064,997 - B158DRAFT_1023 0.89 +0.3 1,065,004 - B158DRAFT_1023 0.90 +0.1 1,065,004 - B158DRAFT_1023 0.90 +0.1 1,065,004 - B158DRAFT_1023 0.90 +0.2 1,065,004 - B158DRAFT_1023 0.90 +0.1 1,065,006 + B158DRAFT_1023 0.90 +0.0 1,065,029 + +0.0 1,065,037 - -0.2
Or see this region's nucleotide sequence