Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0981

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0980 and B158DRAFT_0981 are separated by 255 nucleotidesB158DRAFT_0981 and B158DRAFT_0982 are separated by 6 nucleotides B158DRAFT_0980: B158DRAFT_0980 - hypothetical protein, at 1,012,379 to 1,013,335 _0980 B158DRAFT_0981: B158DRAFT_0981 - phosphoserine phosphatase SerB, at 1,013,591 to 1,014,493 _0981 B158DRAFT_0982: B158DRAFT_0982 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 1,014,500 to 1,016,569 _0982 Position (kb) 1013 1014 1015Strain fitness (log2 ratio) -1 0 1 2at 1012.627 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.791 kb on + strand, within B158DRAFT_0980at 1012.801 kb on + strand, within B158DRAFT_0980at 1012.801 kb on + strand, within B158DRAFT_0980at 1012.809 kb on - strand, within B158DRAFT_0980at 1012.809 kb on - strand, within B158DRAFT_0980at 1012.838 kb on + strand, within B158DRAFT_0980at 1012.838 kb on + strand, within B158DRAFT_0980at 1012.877 kb on + strand, within B158DRAFT_0980at 1012.909 kb on + strand, within B158DRAFT_0980at 1013.008 kb on + strand, within B158DRAFT_0980at 1013.069 kb on + strand, within B158DRAFT_0980at 1013.083 kb on + strand, within B158DRAFT_0980at 1013.093 kb on + strand, within B158DRAFT_0980at 1013.153 kb on + strand, within B158DRAFT_0980at 1013.158 kb on + strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.178 kb on - strand, within B158DRAFT_0980at 1013.202 kb on - strand, within B158DRAFT_0980at 1013.221 kb on - strand, within B158DRAFT_0980at 1013.277 kb on + strandat 1013.285 kb on - strandat 1013.290 kb on - strandat 1013.290 kb on - strandat 1013.346 kb on - strandat 1013.346 kb on - strandat 1013.363 kb on + strandat 1013.423 kb on + strandat 1013.431 kb on - strandat 1013.433 kb on + strandat 1013.433 kb on + strandat 1013.433 kb on + strandat 1013.441 kb on - strandat 1013.441 kb on - strandat 1013.441 kb on - strandat 1013.441 kb on - strandat 1013.441 kb on - strandat 1013.452 kb on + strandat 1013.647 kb on + strandat 1013.657 kb on + strandat 1013.689 kb on + strand, within B158DRAFT_0981at 1013.689 kb on + strand, within B158DRAFT_0981at 1013.697 kb on - strand, within B158DRAFT_0981at 1013.697 kb on - strand, within B158DRAFT_0981at 1013.737 kb on + strand, within B158DRAFT_0981at 1013.744 kb on - strand, within B158DRAFT_0981at 1013.772 kb on + strand, within B158DRAFT_0981at 1013.777 kb on + strand, within B158DRAFT_0981at 1013.784 kb on + strand, within B158DRAFT_0981at 1013.784 kb on + strand, within B158DRAFT_0981at 1013.792 kb on - strand, within B158DRAFT_0981at 1013.825 kb on - strand, within B158DRAFT_0981at 1013.894 kb on + strand, within B158DRAFT_0981at 1013.909 kb on + strand, within B158DRAFT_0981at 1013.909 kb on + strand, within B158DRAFT_0981at 1013.909 kb on + strand, within B158DRAFT_0981at 1013.909 kb on + strand, within B158DRAFT_0981at 1013.917 kb on - strand, within B158DRAFT_0981at 1013.917 kb on - strand, within B158DRAFT_0981at 1013.917 kb on - strand, within B158DRAFT_0981at 1013.917 kb on - strand, within B158DRAFT_0981at 1013.958 kb on + strand, within B158DRAFT_0981at 1013.978 kb on - strand, within B158DRAFT_0981at 1013.982 kb on + strand, within B158DRAFT_0981at 1013.982 kb on + strand, within B158DRAFT_0981at 1013.990 kb on - strand, within B158DRAFT_0981at 1013.990 kb on - strand, within B158DRAFT_0981at 1013.990 kb on - strand, within B158DRAFT_0981at 1014.011 kb on - strand, within B158DRAFT_0981at 1014.015 kb on + strand, within B158DRAFT_0981at 1014.015 kb on + strand, within B158DRAFT_0981at 1014.015 kb on + strand, within B158DRAFT_0981at 1014.023 kb on - strand, within B158DRAFT_0981at 1014.023 kb on - strand, within B158DRAFT_0981at 1014.118 kb on + strand, within B158DRAFT_0981at 1014.118 kb on + strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.126 kb on - strand, within B158DRAFT_0981at 1014.166 kb on + strand, within B158DRAFT_0981at 1014.166 kb on + strand, within B158DRAFT_0981at 1014.166 kb on + strand, within B158DRAFT_0981at 1014.174 kb on - strand, within B158DRAFT_0981at 1014.174 kb on - strand, within B158DRAFT_0981at 1014.174 kb on - strand, within B158DRAFT_0981at 1014.174 kb on - strand, within B158DRAFT_0981at 1014.192 kb on + strand, within B158DRAFT_0981at 1014.207 kb on - strand, within B158DRAFT_0981at 1014.207 kb on - strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.241 kb on + strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.249 kb on - strand, within B158DRAFT_0981at 1014.276 kb on + strand, within B158DRAFT_0981at 1014.281 kb on + strand, within B158DRAFT_0981at 1014.284 kb on - strand, within B158DRAFT_0981at 1014.298 kb on + strand, within B158DRAFT_0981at 1014.306 kb on - strand, within B158DRAFT_0981at 1014.353 kb on - strand, within B158DRAFT_0981at 1014.404 kb on + strandat 1014.412 kb on - strandat 1014.450 kb on + strandat 1014.476 kb on - strandat 1014.476 kb on - strandat 1014.487 kb on + strandat 1014.490 kb on - strandat 1014.495 kb on - strandat 1014.498 kb on + strandat 1014.620 kb on - strandat 1014.641 kb on - strandat 1014.662 kb on + strandat 1014.665 kb on - strandat 1014.684 kb on + strandat 1014.877 kb on + strand, within B158DRAFT_0982at 1014.885 kb on + strand, within B158DRAFT_0982at 1014.885 kb on - strand, within B158DRAFT_0982at 1014.893 kb on + strand, within B158DRAFT_0982at 1014.893 kb on + strand, within B158DRAFT_0982at 1014.893 kb on - strand, within B158DRAFT_0982at 1014.901 kb on - strand, within B158DRAFT_0982at 1014.901 kb on - strand, within B158DRAFT_0982at 1014.905 kb on - strand, within B158DRAFT_0982at 1014.954 kb on + strand, within B158DRAFT_0982at 1014.954 kb on + strand, within B158DRAFT_0982at 1014.954 kb on + strand, within B158DRAFT_0982at 1014.962 kb on - strand, within B158DRAFT_0982at 1014.962 kb on - strand, within B158DRAFT_0982at 1014.962 kb on - strand, within B158DRAFT_0982at 1014.977 kb on - strand, within B158DRAFT_0982at 1015.018 kb on + strand, within B158DRAFT_0982at 1015.140 kb on - strand, within B158DRAFT_0982at 1015.165 kb on + strand, within B158DRAFT_0982at 1015.194 kb on - strand, within B158DRAFT_0982at 1015.195 kb on - strand, within B158DRAFT_0982at 1015.195 kb on - strand, within B158DRAFT_0982at 1015.196 kb on + strand, within B158DRAFT_0982at 1015.199 kb on + strand, within B158DRAFT_0982at 1015.212 kb on + strand, within B158DRAFT_0982at 1015.212 kb on + strand, within B158DRAFT_0982at 1015.220 kb on - strand, within B158DRAFT_0982at 1015.278 kb on + strand, within B158DRAFT_0982at 1015.286 kb on - strand, within B158DRAFT_0982at 1015.286 kb on - strand, within B158DRAFT_0982at 1015.288 kb on + strand, within B158DRAFT_0982at 1015.310 kb on + strand, within B158DRAFT_0982at 1015.318 kb on - strand, within B158DRAFT_0982at 1015.389 kb on - strand, within B158DRAFT_0982at 1015.408 kb on + strand, within B158DRAFT_0982at 1015.437 kb on - strand, within B158DRAFT_0982at 1015.483 kb on + strand, within B158DRAFT_0982at 1015.491 kb on - strand, within B158DRAFT_0982

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,012,627 + B158DRAFT_0980 0.26 -0.6
1,012,644 + B158DRAFT_0980 0.28 +0.2
1,012,644 + B158DRAFT_0980 0.28 -0.0
1,012,644 + B158DRAFT_0980 0.28 -0.3
1,012,644 + B158DRAFT_0980 0.28 +0.1
1,012,644 + B158DRAFT_0980 0.28 +0.9
1,012,652 - B158DRAFT_0980 0.29 -0.3
1,012,652 - B158DRAFT_0980 0.29 +0.4
1,012,652 - B158DRAFT_0980 0.29 +0.7
1,012,652 - B158DRAFT_0980 0.29 -0.0
1,012,791 + B158DRAFT_0980 0.43 +0.1
1,012,801 + B158DRAFT_0980 0.44 +0.2
1,012,801 + B158DRAFT_0980 0.44 +0.7
1,012,809 - B158DRAFT_0980 0.45 -0.1
1,012,809 - B158DRAFT_0980 0.45 +0.6
1,012,838 + B158DRAFT_0980 0.48 +0.6
1,012,838 + B158DRAFT_0980 0.48 -0.4
1,012,877 + B158DRAFT_0980 0.52 +0.0
1,012,909 + B158DRAFT_0980 0.55 +1.1
1,013,008 + B158DRAFT_0980 0.66 +0.8
1,013,069 + B158DRAFT_0980 0.72 +0.5
1,013,083 + B158DRAFT_0980 0.74 -0.3
1,013,093 + B158DRAFT_0980 0.75 +1.0
1,013,153 + B158DRAFT_0980 0.81 -0.4
1,013,158 + B158DRAFT_0980 0.81 +0.9
1,013,166 - B158DRAFT_0980 0.82 +0.5
1,013,166 - B158DRAFT_0980 0.82 +0.2
1,013,166 - B158DRAFT_0980 0.82 +0.6
1,013,166 - B158DRAFT_0980 0.82 +0.9
1,013,166 - B158DRAFT_0980 0.82 +0.2
1,013,178 - B158DRAFT_0980 0.83 +0.9
1,013,202 - B158DRAFT_0980 0.86 +0.8
1,013,221 - B158DRAFT_0980 0.88 +0.9
1,013,277 + +0.3
1,013,285 - +0.8
1,013,290 - +0.6
1,013,290 - +0.8
1,013,346 - +1.2
1,013,346 - +0.5
1,013,363 + +0.7
1,013,423 + +0.6
1,013,431 - +0.4
1,013,433 + +1.4
1,013,433 + +1.6
1,013,433 + +0.7
1,013,441 - +0.5
1,013,441 - +1.1
1,013,441 - +0.6
1,013,441 - +1.2
1,013,441 - +0.2
1,013,452 + +0.7
1,013,647 + -0.5
1,013,657 + +0.4
1,013,689 + B158DRAFT_0981 0.11 -0.6
1,013,689 + B158DRAFT_0981 0.11 -0.6
1,013,697 - B158DRAFT_0981 0.12 -0.3
1,013,697 - B158DRAFT_0981 0.12 -0.7
1,013,737 + B158DRAFT_0981 0.16 -0.0
1,013,744 - B158DRAFT_0981 0.17 -0.3
1,013,772 + B158DRAFT_0981 0.20 -0.2
1,013,777 + B158DRAFT_0981 0.21 -0.4
1,013,784 + B158DRAFT_0981 0.21 -0.5
1,013,784 + B158DRAFT_0981 0.21 -0.1
1,013,792 - B158DRAFT_0981 0.22 +0.2
1,013,825 - B158DRAFT_0981 0.26 -0.6
1,013,894 + B158DRAFT_0981 0.34 -0.4
1,013,909 + B158DRAFT_0981 0.35 -0.1
1,013,909 + B158DRAFT_0981 0.35 +0.9
1,013,909 + B158DRAFT_0981 0.35 -0.6
1,013,909 + B158DRAFT_0981 0.35 -1.0
1,013,917 - B158DRAFT_0981 0.36 -0.2
1,013,917 - B158DRAFT_0981 0.36 -0.9
1,013,917 - B158DRAFT_0981 0.36 +0.5
1,013,917 - B158DRAFT_0981 0.36 -0.5
1,013,958 + B158DRAFT_0981 0.41 -0.0
1,013,978 - B158DRAFT_0981 0.43 -0.5
1,013,982 + B158DRAFT_0981 0.43 -0.6
1,013,982 + B158DRAFT_0981 0.43 +0.2
1,013,990 - B158DRAFT_0981 0.44 -0.5
1,013,990 - B158DRAFT_0981 0.44 -1.6
1,013,990 - B158DRAFT_0981 0.44 -0.7
1,014,011 - B158DRAFT_0981 0.47 -0.9
1,014,015 + B158DRAFT_0981 0.47 -0.8
1,014,015 + B158DRAFT_0981 0.47 -0.5
1,014,015 + B158DRAFT_0981 0.47 -0.9
1,014,023 - B158DRAFT_0981 0.48 -0.9
1,014,023 - B158DRAFT_0981 0.48 -0.8
1,014,118 + B158DRAFT_0981 0.58 -0.0
1,014,118 + B158DRAFT_0981 0.58 -0.6
1,014,126 - B158DRAFT_0981 0.59 -0.5
1,014,126 - B158DRAFT_0981 0.59 -0.4
1,014,126 - B158DRAFT_0981 0.59 +0.4
1,014,126 - B158DRAFT_0981 0.59 +0.7
1,014,126 - B158DRAFT_0981 0.59 -1.0
1,014,126 - B158DRAFT_0981 0.59 -0.4
1,014,166 + B158DRAFT_0981 0.64 -1.6
1,014,166 + B158DRAFT_0981 0.64 -0.2
1,014,166 + B158DRAFT_0981 0.64 -0.6
1,014,174 - B158DRAFT_0981 0.65 -0.9
1,014,174 - B158DRAFT_0981 0.65 +1.2
1,014,174 - B158DRAFT_0981 0.65 -0.2
1,014,174 - B158DRAFT_0981 0.65 -0.2
1,014,192 + B158DRAFT_0981 0.67 -0.7
1,014,207 - B158DRAFT_0981 0.68 -0.5
1,014,207 - B158DRAFT_0981 0.68 -0.9
1,014,241 + B158DRAFT_0981 0.72 -0.1
1,014,241 + B158DRAFT_0981 0.72 -0.3
1,014,241 + B158DRAFT_0981 0.72 -0.3
1,014,241 + B158DRAFT_0981 0.72 -0.2
1,014,241 + B158DRAFT_0981 0.72 -1.0
1,014,241 + B158DRAFT_0981 0.72 +0.5
1,014,241 + B158DRAFT_0981 0.72 -0.5
1,014,241 + B158DRAFT_0981 0.72 -0.5
1,014,241 + B158DRAFT_0981 0.72 -0.3
1,014,241 + B158DRAFT_0981 0.72 +0.9
1,014,241 + B158DRAFT_0981 0.72 -1.0
1,014,241 + B158DRAFT_0981 0.72 -0.3
1,014,249 - B158DRAFT_0981 0.73 -0.9
1,014,249 - B158DRAFT_0981 0.73 -0.5
1,014,249 - B158DRAFT_0981 0.73 -0.1
1,014,249 - B158DRAFT_0981 0.73 -0.2
1,014,249 - B158DRAFT_0981 0.73 -0.1
1,014,249 - B158DRAFT_0981 0.73 -0.2
1,014,276 + B158DRAFT_0981 0.76 -0.1
1,014,281 + B158DRAFT_0981 0.76 -0.8
1,014,284 - B158DRAFT_0981 0.77 -0.4
1,014,298 + B158DRAFT_0981 0.78 -0.4
1,014,306 - B158DRAFT_0981 0.79 -0.2
1,014,353 - B158DRAFT_0981 0.84 -0.2
1,014,404 + -0.6
1,014,412 - -1.0
1,014,450 + +0.2
1,014,476 - -0.7
1,014,476 - +0.0
1,014,487 + -0.0
1,014,490 - -0.9
1,014,495 - -0.2
1,014,498 + -0.2
1,014,620 - +0.3
1,014,641 - +0.3
1,014,662 + +0.4
1,014,665 - +0.6
1,014,684 + +0.1
1,014,877 + B158DRAFT_0982 0.18 +1.8
1,014,885 + B158DRAFT_0982 0.19 +0.6
1,014,885 - B158DRAFT_0982 0.19 +0.6
1,014,893 + B158DRAFT_0982 0.19 +0.5
1,014,893 + B158DRAFT_0982 0.19 +0.3
1,014,893 - B158DRAFT_0982 0.19 +0.4
1,014,901 - B158DRAFT_0982 0.19 +0.1
1,014,901 - B158DRAFT_0982 0.19 +0.8
1,014,905 - B158DRAFT_0982 0.20 -0.8
1,014,954 + B158DRAFT_0982 0.22 +0.2
1,014,954 + B158DRAFT_0982 0.22 +2.3
1,014,954 + B158DRAFT_0982 0.22 +1.4
1,014,962 - B158DRAFT_0982 0.22 +0.5
1,014,962 - B158DRAFT_0982 0.22 +0.2
1,014,962 - B158DRAFT_0982 0.22 +1.1
1,014,977 - B158DRAFT_0982 0.23 +0.9
1,015,018 + B158DRAFT_0982 0.25 +0.6
1,015,140 - B158DRAFT_0982 0.31 +0.2
1,015,165 + B158DRAFT_0982 0.32 +0.7
1,015,194 - B158DRAFT_0982 0.34 +0.5
1,015,195 - B158DRAFT_0982 0.34 +0.3
1,015,195 - B158DRAFT_0982 0.34 +0.3
1,015,196 + B158DRAFT_0982 0.34 +0.3
1,015,199 + B158DRAFT_0982 0.34 +0.1
1,015,212 + B158DRAFT_0982 0.34 +0.3
1,015,212 + B158DRAFT_0982 0.34 +0.5
1,015,220 - B158DRAFT_0982 0.35 -0.1
1,015,278 + B158DRAFT_0982 0.38 +0.5
1,015,286 - B158DRAFT_0982 0.38 +0.0
1,015,286 - B158DRAFT_0982 0.38 -0.1
1,015,288 + B158DRAFT_0982 0.38 +0.6
1,015,310 + B158DRAFT_0982 0.39 +0.2
1,015,318 - B158DRAFT_0982 0.40 +0.0
1,015,389 - B158DRAFT_0982 0.43 +0.9
1,015,408 + B158DRAFT_0982 0.44 +0.1
1,015,437 - B158DRAFT_0982 0.45 +0.4
1,015,483 + B158DRAFT_0982 0.47 +0.4
1,015,491 - B158DRAFT_0982 0.48 +2.5

Or see this region's nucleotide sequence