Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0980 and B158DRAFT_0981 are separated by 255 nucleotides B158DRAFT_0981 and B158DRAFT_0982 are separated by 6 nucleotides
B158DRAFT_0980: B158DRAFT_0980 - hypothetical protein, at 1,012,379 to 1,013,335
_0980
B158DRAFT_0981: B158DRAFT_0981 - phosphoserine phosphatase SerB, at 1,013,591 to 1,014,493
_0981
B158DRAFT_0982: B158DRAFT_0982 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 1,014,500 to 1,016,569
_0982
Position (kb)
1013
1014
1015 Strain fitness (log2 ratio)
-1
0
1
2 at 1012.627 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.791 kb on + strand, within B158DRAFT_0980 at 1012.801 kb on + strand, within B158DRAFT_0980 at 1012.801 kb on + strand, within B158DRAFT_0980 at 1012.809 kb on - strand, within B158DRAFT_0980 at 1012.809 kb on - strand, within B158DRAFT_0980 at 1012.838 kb on + strand, within B158DRAFT_0980 at 1012.838 kb on + strand, within B158DRAFT_0980 at 1012.877 kb on + strand, within B158DRAFT_0980 at 1012.909 kb on + strand, within B158DRAFT_0980 at 1013.008 kb on + strand, within B158DRAFT_0980 at 1013.069 kb on + strand, within B158DRAFT_0980 at 1013.083 kb on + strand, within B158DRAFT_0980 at 1013.093 kb on + strand, within B158DRAFT_0980 at 1013.153 kb on + strand, within B158DRAFT_0980 at 1013.158 kb on + strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.178 kb on - strand, within B158DRAFT_0980 at 1013.202 kb on - strand, within B158DRAFT_0980 at 1013.221 kb on - strand, within B158DRAFT_0980 at 1013.277 kb on + strand at 1013.285 kb on - strand at 1013.290 kb on - strand at 1013.290 kb on - strand at 1013.346 kb on - strand at 1013.346 kb on - strand at 1013.363 kb on + strand at 1013.423 kb on + strand at 1013.431 kb on - strand at 1013.433 kb on + strand at 1013.433 kb on + strand at 1013.433 kb on + strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.452 kb on + strand at 1013.647 kb on + strand at 1013.657 kb on + strand at 1013.689 kb on + strand, within B158DRAFT_0981 at 1013.689 kb on + strand, within B158DRAFT_0981 at 1013.697 kb on - strand, within B158DRAFT_0981 at 1013.697 kb on - strand, within B158DRAFT_0981 at 1013.737 kb on + strand, within B158DRAFT_0981 at 1013.744 kb on - strand, within B158DRAFT_0981 at 1013.772 kb on + strand, within B158DRAFT_0981 at 1013.777 kb on + strand, within B158DRAFT_0981 at 1013.784 kb on + strand, within B158DRAFT_0981 at 1013.784 kb on + strand, within B158DRAFT_0981 at 1013.792 kb on - strand, within B158DRAFT_0981 at 1013.825 kb on - strand, within B158DRAFT_0981 at 1013.894 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.958 kb on + strand, within B158DRAFT_0981 at 1013.978 kb on - strand, within B158DRAFT_0981 at 1013.982 kb on + strand, within B158DRAFT_0981 at 1013.982 kb on + strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1014.011 kb on - strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.023 kb on - strand, within B158DRAFT_0981 at 1014.023 kb on - strand, within B158DRAFT_0981 at 1014.118 kb on + strand, within B158DRAFT_0981 at 1014.118 kb on + strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.192 kb on + strand, within B158DRAFT_0981 at 1014.207 kb on - strand, within B158DRAFT_0981 at 1014.207 kb on - strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.276 kb on + strand, within B158DRAFT_0981 at 1014.281 kb on + strand, within B158DRAFT_0981 at 1014.284 kb on - strand, within B158DRAFT_0981 at 1014.298 kb on + strand, within B158DRAFT_0981 at 1014.306 kb on - strand, within B158DRAFT_0981 at 1014.353 kb on - strand, within B158DRAFT_0981 at 1014.404 kb on + strand at 1014.412 kb on - strand at 1014.450 kb on + strand at 1014.476 kb on - strand at 1014.476 kb on - strand at 1014.487 kb on + strand at 1014.490 kb on - strand at 1014.495 kb on - strand at 1014.498 kb on + strand at 1014.620 kb on - strand at 1014.641 kb on - strand at 1014.662 kb on + strand at 1014.665 kb on - strand at 1014.684 kb on + strand at 1014.877 kb on + strand, within B158DRAFT_0982 at 1014.885 kb on + strand, within B158DRAFT_0982 at 1014.885 kb on - strand, within B158DRAFT_0982 at 1014.893 kb on + strand, within B158DRAFT_0982 at 1014.893 kb on + strand, within B158DRAFT_0982 at 1014.893 kb on - strand, within B158DRAFT_0982 at 1014.901 kb on - strand, within B158DRAFT_0982 at 1014.901 kb on - strand, within B158DRAFT_0982 at 1014.905 kb on - strand, within B158DRAFT_0982 at 1014.954 kb on + strand, within B158DRAFT_0982 at 1014.954 kb on + strand, within B158DRAFT_0982 at 1014.954 kb on + strand, within B158DRAFT_0982 at 1014.962 kb on - strand, within B158DRAFT_0982 at 1014.962 kb on - strand, within B158DRAFT_0982 at 1014.962 kb on - strand, within B158DRAFT_0982 at 1014.977 kb on - strand, within B158DRAFT_0982 at 1015.018 kb on + strand, within B158DRAFT_0982 at 1015.140 kb on - strand, within B158DRAFT_0982 at 1015.165 kb on + strand, within B158DRAFT_0982 at 1015.194 kb on - strand, within B158DRAFT_0982 at 1015.195 kb on - strand, within B158DRAFT_0982 at 1015.195 kb on - strand, within B158DRAFT_0982 at 1015.196 kb on + strand, within B158DRAFT_0982 at 1015.199 kb on + strand, within B158DRAFT_0982 at 1015.212 kb on + strand, within B158DRAFT_0982 at 1015.212 kb on + strand, within B158DRAFT_0982 at 1015.220 kb on - strand, within B158DRAFT_0982 at 1015.278 kb on + strand, within B158DRAFT_0982 at 1015.286 kb on - strand, within B158DRAFT_0982 at 1015.286 kb on - strand, within B158DRAFT_0982 at 1015.288 kb on + strand, within B158DRAFT_0982 at 1015.310 kb on + strand, within B158DRAFT_0982 at 1015.318 kb on - strand, within B158DRAFT_0982 at 1015.389 kb on - strand, within B158DRAFT_0982 at 1015.408 kb on + strand, within B158DRAFT_0982 at 1015.437 kb on - strand, within B158DRAFT_0982 at 1015.483 kb on + strand, within B158DRAFT_0982 at 1015.491 kb on - strand, within B158DRAFT_0982
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,012,627 + B158DRAFT_0980 0.26 -0.6 1,012,644 + B158DRAFT_0980 0.28 +0.2 1,012,644 + B158DRAFT_0980 0.28 -0.0 1,012,644 + B158DRAFT_0980 0.28 -0.3 1,012,644 + B158DRAFT_0980 0.28 +0.1 1,012,644 + B158DRAFT_0980 0.28 +0.9 1,012,652 - B158DRAFT_0980 0.29 -0.3 1,012,652 - B158DRAFT_0980 0.29 +0.4 1,012,652 - B158DRAFT_0980 0.29 +0.7 1,012,652 - B158DRAFT_0980 0.29 -0.0 1,012,791 + B158DRAFT_0980 0.43 +0.1 1,012,801 + B158DRAFT_0980 0.44 +0.2 1,012,801 + B158DRAFT_0980 0.44 +0.7 1,012,809 - B158DRAFT_0980 0.45 -0.1 1,012,809 - B158DRAFT_0980 0.45 +0.6 1,012,838 + B158DRAFT_0980 0.48 +0.6 1,012,838 + B158DRAFT_0980 0.48 -0.4 1,012,877 + B158DRAFT_0980 0.52 +0.0 1,012,909 + B158DRAFT_0980 0.55 +1.1 1,013,008 + B158DRAFT_0980 0.66 +0.8 1,013,069 + B158DRAFT_0980 0.72 +0.5 1,013,083 + B158DRAFT_0980 0.74 -0.3 1,013,093 + B158DRAFT_0980 0.75 +1.0 1,013,153 + B158DRAFT_0980 0.81 -0.4 1,013,158 + B158DRAFT_0980 0.81 +0.9 1,013,166 - B158DRAFT_0980 0.82 +0.5 1,013,166 - B158DRAFT_0980 0.82 +0.2 1,013,166 - B158DRAFT_0980 0.82 +0.6 1,013,166 - B158DRAFT_0980 0.82 +0.9 1,013,166 - B158DRAFT_0980 0.82 +0.2 1,013,178 - B158DRAFT_0980 0.83 +0.9 1,013,202 - B158DRAFT_0980 0.86 +0.8 1,013,221 - B158DRAFT_0980 0.88 +0.9 1,013,277 + +0.3 1,013,285 - +0.8 1,013,290 - +0.6 1,013,290 - +0.8 1,013,346 - +1.2 1,013,346 - +0.5 1,013,363 + +0.7 1,013,423 + +0.6 1,013,431 - +0.4 1,013,433 + +1.4 1,013,433 + +1.6 1,013,433 + +0.7 1,013,441 - +0.5 1,013,441 - +1.1 1,013,441 - +0.6 1,013,441 - +1.2 1,013,441 - +0.2 1,013,452 + +0.7 1,013,647 + -0.5 1,013,657 + +0.4 1,013,689 + B158DRAFT_0981 0.11 -0.6 1,013,689 + B158DRAFT_0981 0.11 -0.6 1,013,697 - B158DRAFT_0981 0.12 -0.3 1,013,697 - B158DRAFT_0981 0.12 -0.7 1,013,737 + B158DRAFT_0981 0.16 -0.0 1,013,744 - B158DRAFT_0981 0.17 -0.3 1,013,772 + B158DRAFT_0981 0.20 -0.2 1,013,777 + B158DRAFT_0981 0.21 -0.4 1,013,784 + B158DRAFT_0981 0.21 -0.5 1,013,784 + B158DRAFT_0981 0.21 -0.1 1,013,792 - B158DRAFT_0981 0.22 +0.2 1,013,825 - B158DRAFT_0981 0.26 -0.6 1,013,894 + B158DRAFT_0981 0.34 -0.4 1,013,909 + B158DRAFT_0981 0.35 -0.1 1,013,909 + B158DRAFT_0981 0.35 +0.9 1,013,909 + B158DRAFT_0981 0.35 -0.6 1,013,909 + B158DRAFT_0981 0.35 -1.0 1,013,917 - B158DRAFT_0981 0.36 -0.2 1,013,917 - B158DRAFT_0981 0.36 -0.9 1,013,917 - B158DRAFT_0981 0.36 +0.5 1,013,917 - B158DRAFT_0981 0.36 -0.5 1,013,958 + B158DRAFT_0981 0.41 -0.0 1,013,978 - B158DRAFT_0981 0.43 -0.5 1,013,982 + B158DRAFT_0981 0.43 -0.6 1,013,982 + B158DRAFT_0981 0.43 +0.2 1,013,990 - B158DRAFT_0981 0.44 -0.5 1,013,990 - B158DRAFT_0981 0.44 -1.6 1,013,990 - B158DRAFT_0981 0.44 -0.7 1,014,011 - B158DRAFT_0981 0.47 -0.9 1,014,015 + B158DRAFT_0981 0.47 -0.8 1,014,015 + B158DRAFT_0981 0.47 -0.5 1,014,015 + B158DRAFT_0981 0.47 -0.9 1,014,023 - B158DRAFT_0981 0.48 -0.9 1,014,023 - B158DRAFT_0981 0.48 -0.8 1,014,118 + B158DRAFT_0981 0.58 -0.0 1,014,118 + B158DRAFT_0981 0.58 -0.6 1,014,126 - B158DRAFT_0981 0.59 -0.5 1,014,126 - B158DRAFT_0981 0.59 -0.4 1,014,126 - B158DRAFT_0981 0.59 +0.4 1,014,126 - B158DRAFT_0981 0.59 +0.7 1,014,126 - B158DRAFT_0981 0.59 -1.0 1,014,126 - B158DRAFT_0981 0.59 -0.4 1,014,166 + B158DRAFT_0981 0.64 -1.6 1,014,166 + B158DRAFT_0981 0.64 -0.2 1,014,166 + B158DRAFT_0981 0.64 -0.6 1,014,174 - B158DRAFT_0981 0.65 -0.9 1,014,174 - B158DRAFT_0981 0.65 +1.2 1,014,174 - B158DRAFT_0981 0.65 -0.2 1,014,174 - B158DRAFT_0981 0.65 -0.2 1,014,192 + B158DRAFT_0981 0.67 -0.7 1,014,207 - B158DRAFT_0981 0.68 -0.5 1,014,207 - B158DRAFT_0981 0.68 -0.9 1,014,241 + B158DRAFT_0981 0.72 -0.1 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 -0.2 1,014,241 + B158DRAFT_0981 0.72 -1.0 1,014,241 + B158DRAFT_0981 0.72 +0.5 1,014,241 + B158DRAFT_0981 0.72 -0.5 1,014,241 + B158DRAFT_0981 0.72 -0.5 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 +0.9 1,014,241 + B158DRAFT_0981 0.72 -1.0 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,249 - B158DRAFT_0981 0.73 -0.9 1,014,249 - B158DRAFT_0981 0.73 -0.5 1,014,249 - B158DRAFT_0981 0.73 -0.1 1,014,249 - B158DRAFT_0981 0.73 -0.2 1,014,249 - B158DRAFT_0981 0.73 -0.1 1,014,249 - B158DRAFT_0981 0.73 -0.2 1,014,276 + B158DRAFT_0981 0.76 -0.1 1,014,281 + B158DRAFT_0981 0.76 -0.8 1,014,284 - B158DRAFT_0981 0.77 -0.4 1,014,298 + B158DRAFT_0981 0.78 -0.4 1,014,306 - B158DRAFT_0981 0.79 -0.2 1,014,353 - B158DRAFT_0981 0.84 -0.2 1,014,404 + -0.6 1,014,412 - -1.0 1,014,450 + +0.2 1,014,476 - -0.7 1,014,476 - +0.0 1,014,487 + -0.0 1,014,490 - -0.9 1,014,495 - -0.2 1,014,498 + -0.2 1,014,620 - +0.3 1,014,641 - +0.3 1,014,662 + +0.4 1,014,665 - +0.6 1,014,684 + +0.1 1,014,877 + B158DRAFT_0982 0.18 +1.8 1,014,885 + B158DRAFT_0982 0.19 +0.6 1,014,885 - B158DRAFT_0982 0.19 +0.6 1,014,893 + B158DRAFT_0982 0.19 +0.5 1,014,893 + B158DRAFT_0982 0.19 +0.3 1,014,893 - B158DRAFT_0982 0.19 +0.4 1,014,901 - B158DRAFT_0982 0.19 +0.1 1,014,901 - B158DRAFT_0982 0.19 +0.8 1,014,905 - B158DRAFT_0982 0.20 -0.8 1,014,954 + B158DRAFT_0982 0.22 +0.2 1,014,954 + B158DRAFT_0982 0.22 +2.3 1,014,954 + B158DRAFT_0982 0.22 +1.4 1,014,962 - B158DRAFT_0982 0.22 +0.5 1,014,962 - B158DRAFT_0982 0.22 +0.2 1,014,962 - B158DRAFT_0982 0.22 +1.1 1,014,977 - B158DRAFT_0982 0.23 +0.9 1,015,018 + B158DRAFT_0982 0.25 +0.6 1,015,140 - B158DRAFT_0982 0.31 +0.2 1,015,165 + B158DRAFT_0982 0.32 +0.7 1,015,194 - B158DRAFT_0982 0.34 +0.5 1,015,195 - B158DRAFT_0982 0.34 +0.3 1,015,195 - B158DRAFT_0982 0.34 +0.3 1,015,196 + B158DRAFT_0982 0.34 +0.3 1,015,199 + B158DRAFT_0982 0.34 +0.1 1,015,212 + B158DRAFT_0982 0.34 +0.3 1,015,212 + B158DRAFT_0982 0.34 +0.5 1,015,220 - B158DRAFT_0982 0.35 -0.1 1,015,278 + B158DRAFT_0982 0.38 +0.5 1,015,286 - B158DRAFT_0982 0.38 +0.0 1,015,286 - B158DRAFT_0982 0.38 -0.1 1,015,288 + B158DRAFT_0982 0.38 +0.6 1,015,310 + B158DRAFT_0982 0.39 +0.2 1,015,318 - B158DRAFT_0982 0.40 +0.0 1,015,389 - B158DRAFT_0982 0.43 +0.9 1,015,408 + B158DRAFT_0982 0.44 +0.1 1,015,437 - B158DRAFT_0982 0.45 +0.4 1,015,483 + B158DRAFT_0982 0.47 +0.4 1,015,491 - B158DRAFT_0982 0.48 +2.5
Or see this region's nucleotide sequence