Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0979 and B158DRAFT_0980 are separated by 74 nucleotides B158DRAFT_0980 and B158DRAFT_0981 are separated by 255 nucleotides
B158DRAFT_0979: B158DRAFT_0979 - DNA topoisomerase IV, A subunit, proteobacterial, at 1,010,064 to 1,012,304
_0979
B158DRAFT_0980: B158DRAFT_0980 - hypothetical protein, at 1,012,379 to 1,013,335
_0980
B158DRAFT_0981: B158DRAFT_0981 - phosphoserine phosphatase SerB, at 1,013,591 to 1,014,493
_0981
Position (kb)
1012
1013
1014 Strain fitness (log2 ratio)
-2
-1
0
1 at 1012.280 kb on + strand at 1012.294 kb on - strand at 1012.298 kb on + strand at 1012.306 kb on - strand at 1012.306 kb on - strand at 1012.306 kb on - strand at 1012.306 kb on - strand at 1012.408 kb on + strand at 1012.408 kb on + strand at 1012.455 kb on + strand at 1012.455 kb on + strand at 1012.455 kb on + strand at 1012.455 kb on + strand at 1012.455 kb on + strand at 1012.463 kb on - strand at 1012.503 kb on + strand, within B158DRAFT_0980 at 1012.503 kb on + strand, within B158DRAFT_0980 at 1012.511 kb on + strand, within B158DRAFT_0980 at 1012.534 kb on + strand, within B158DRAFT_0980 at 1012.542 kb on - strand, within B158DRAFT_0980 at 1012.627 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.644 kb on + strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.652 kb on - strand, within B158DRAFT_0980 at 1012.791 kb on + strand, within B158DRAFT_0980 at 1012.801 kb on + strand, within B158DRAFT_0980 at 1012.801 kb on + strand, within B158DRAFT_0980 at 1012.809 kb on - strand, within B158DRAFT_0980 at 1012.809 kb on - strand, within B158DRAFT_0980 at 1012.838 kb on + strand, within B158DRAFT_0980 at 1012.838 kb on + strand, within B158DRAFT_0980 at 1012.877 kb on + strand, within B158DRAFT_0980 at 1012.909 kb on + strand, within B158DRAFT_0980 at 1013.008 kb on + strand, within B158DRAFT_0980 at 1013.069 kb on + strand, within B158DRAFT_0980 at 1013.083 kb on + strand, within B158DRAFT_0980 at 1013.093 kb on + strand, within B158DRAFT_0980 at 1013.153 kb on + strand, within B158DRAFT_0980 at 1013.158 kb on + strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.166 kb on - strand, within B158DRAFT_0980 at 1013.178 kb on - strand, within B158DRAFT_0980 at 1013.202 kb on - strand, within B158DRAFT_0980 at 1013.221 kb on - strand, within B158DRAFT_0980 at 1013.277 kb on + strand at 1013.285 kb on - strand at 1013.290 kb on - strand at 1013.290 kb on - strand at 1013.346 kb on - strand at 1013.346 kb on - strand at 1013.363 kb on + strand at 1013.423 kb on + strand at 1013.431 kb on - strand at 1013.433 kb on + strand at 1013.433 kb on + strand at 1013.433 kb on + strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.441 kb on - strand at 1013.452 kb on + strand at 1013.647 kb on + strand at 1013.657 kb on + strand at 1013.689 kb on + strand, within B158DRAFT_0981 at 1013.689 kb on + strand, within B158DRAFT_0981 at 1013.697 kb on - strand, within B158DRAFT_0981 at 1013.697 kb on - strand, within B158DRAFT_0981 at 1013.737 kb on + strand, within B158DRAFT_0981 at 1013.744 kb on - strand, within B158DRAFT_0981 at 1013.772 kb on + strand, within B158DRAFT_0981 at 1013.777 kb on + strand, within B158DRAFT_0981 at 1013.784 kb on + strand, within B158DRAFT_0981 at 1013.784 kb on + strand, within B158DRAFT_0981 at 1013.792 kb on - strand, within B158DRAFT_0981 at 1013.825 kb on - strand, within B158DRAFT_0981 at 1013.894 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.909 kb on + strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.917 kb on - strand, within B158DRAFT_0981 at 1013.958 kb on + strand, within B158DRAFT_0981 at 1013.978 kb on - strand, within B158DRAFT_0981 at 1013.982 kb on + strand, within B158DRAFT_0981 at 1013.982 kb on + strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1013.990 kb on - strand, within B158DRAFT_0981 at 1014.011 kb on - strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.015 kb on + strand, within B158DRAFT_0981 at 1014.023 kb on - strand, within B158DRAFT_0981 at 1014.023 kb on - strand, within B158DRAFT_0981 at 1014.118 kb on + strand, within B158DRAFT_0981 at 1014.118 kb on + strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.126 kb on - strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.166 kb on + strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.174 kb on - strand, within B158DRAFT_0981 at 1014.192 kb on + strand, within B158DRAFT_0981 at 1014.207 kb on - strand, within B158DRAFT_0981 at 1014.207 kb on - strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.241 kb on + strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.249 kb on - strand, within B158DRAFT_0981 at 1014.276 kb on + strand, within B158DRAFT_0981 at 1014.281 kb on + strand, within B158DRAFT_0981 at 1014.284 kb on - strand, within B158DRAFT_0981 at 1014.298 kb on + strand, within B158DRAFT_0981 at 1014.306 kb on - strand, within B158DRAFT_0981
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,012,280 + -0.2 1,012,294 - -2.1 1,012,298 + +0.1 1,012,306 - +0.1 1,012,306 - +0.0 1,012,306 - -0.1 1,012,306 - -0.1 1,012,408 + +0.4 1,012,408 + -0.2 1,012,455 + +0.4 1,012,455 + +0.5 1,012,455 + +0.2 1,012,455 + +0.8 1,012,455 + +1.5 1,012,463 - -0.2 1,012,503 + B158DRAFT_0980 0.13 +0.2 1,012,503 + B158DRAFT_0980 0.13 +0.6 1,012,511 + B158DRAFT_0980 0.14 +0.1 1,012,534 + B158DRAFT_0980 0.16 -0.6 1,012,542 - B158DRAFT_0980 0.17 -0.2 1,012,627 + B158DRAFT_0980 0.26 -0.6 1,012,644 + B158DRAFT_0980 0.28 +0.2 1,012,644 + B158DRAFT_0980 0.28 -0.0 1,012,644 + B158DRAFT_0980 0.28 -0.3 1,012,644 + B158DRAFT_0980 0.28 +0.1 1,012,644 + B158DRAFT_0980 0.28 +0.9 1,012,652 - B158DRAFT_0980 0.29 -0.3 1,012,652 - B158DRAFT_0980 0.29 +0.4 1,012,652 - B158DRAFT_0980 0.29 +0.7 1,012,652 - B158DRAFT_0980 0.29 -0.0 1,012,791 + B158DRAFT_0980 0.43 +0.1 1,012,801 + B158DRAFT_0980 0.44 +0.2 1,012,801 + B158DRAFT_0980 0.44 +0.7 1,012,809 - B158DRAFT_0980 0.45 -0.1 1,012,809 - B158DRAFT_0980 0.45 +0.6 1,012,838 + B158DRAFT_0980 0.48 +0.6 1,012,838 + B158DRAFT_0980 0.48 -0.4 1,012,877 + B158DRAFT_0980 0.52 +0.0 1,012,909 + B158DRAFT_0980 0.55 +1.1 1,013,008 + B158DRAFT_0980 0.66 +0.8 1,013,069 + B158DRAFT_0980 0.72 +0.5 1,013,083 + B158DRAFT_0980 0.74 -0.3 1,013,093 + B158DRAFT_0980 0.75 +1.0 1,013,153 + B158DRAFT_0980 0.81 -0.4 1,013,158 + B158DRAFT_0980 0.81 +0.9 1,013,166 - B158DRAFT_0980 0.82 +0.5 1,013,166 - B158DRAFT_0980 0.82 +0.2 1,013,166 - B158DRAFT_0980 0.82 +0.6 1,013,166 - B158DRAFT_0980 0.82 +0.9 1,013,166 - B158DRAFT_0980 0.82 +0.2 1,013,178 - B158DRAFT_0980 0.83 +0.9 1,013,202 - B158DRAFT_0980 0.86 +0.8 1,013,221 - B158DRAFT_0980 0.88 +0.9 1,013,277 + +0.3 1,013,285 - +0.8 1,013,290 - +0.6 1,013,290 - +0.8 1,013,346 - +1.2 1,013,346 - +0.5 1,013,363 + +0.7 1,013,423 + +0.6 1,013,431 - +0.4 1,013,433 + +1.4 1,013,433 + +1.6 1,013,433 + +0.7 1,013,441 - +0.5 1,013,441 - +1.1 1,013,441 - +0.6 1,013,441 - +1.2 1,013,441 - +0.2 1,013,452 + +0.7 1,013,647 + -0.5 1,013,657 + +0.4 1,013,689 + B158DRAFT_0981 0.11 -0.6 1,013,689 + B158DRAFT_0981 0.11 -0.6 1,013,697 - B158DRAFT_0981 0.12 -0.3 1,013,697 - B158DRAFT_0981 0.12 -0.7 1,013,737 + B158DRAFT_0981 0.16 -0.0 1,013,744 - B158DRAFT_0981 0.17 -0.3 1,013,772 + B158DRAFT_0981 0.20 -0.2 1,013,777 + B158DRAFT_0981 0.21 -0.4 1,013,784 + B158DRAFT_0981 0.21 -0.5 1,013,784 + B158DRAFT_0981 0.21 -0.1 1,013,792 - B158DRAFT_0981 0.22 +0.2 1,013,825 - B158DRAFT_0981 0.26 -0.6 1,013,894 + B158DRAFT_0981 0.34 -0.4 1,013,909 + B158DRAFT_0981 0.35 -0.1 1,013,909 + B158DRAFT_0981 0.35 +0.9 1,013,909 + B158DRAFT_0981 0.35 -0.6 1,013,909 + B158DRAFT_0981 0.35 -1.0 1,013,917 - B158DRAFT_0981 0.36 -0.2 1,013,917 - B158DRAFT_0981 0.36 -0.9 1,013,917 - B158DRAFT_0981 0.36 +0.5 1,013,917 - B158DRAFT_0981 0.36 -0.5 1,013,958 + B158DRAFT_0981 0.41 -0.0 1,013,978 - B158DRAFT_0981 0.43 -0.5 1,013,982 + B158DRAFT_0981 0.43 -0.6 1,013,982 + B158DRAFT_0981 0.43 +0.2 1,013,990 - B158DRAFT_0981 0.44 -0.5 1,013,990 - B158DRAFT_0981 0.44 -1.6 1,013,990 - B158DRAFT_0981 0.44 -0.7 1,014,011 - B158DRAFT_0981 0.47 -0.9 1,014,015 + B158DRAFT_0981 0.47 -0.8 1,014,015 + B158DRAFT_0981 0.47 -0.5 1,014,015 + B158DRAFT_0981 0.47 -0.9 1,014,023 - B158DRAFT_0981 0.48 -0.9 1,014,023 - B158DRAFT_0981 0.48 -0.8 1,014,118 + B158DRAFT_0981 0.58 -0.0 1,014,118 + B158DRAFT_0981 0.58 -0.6 1,014,126 - B158DRAFT_0981 0.59 -0.5 1,014,126 - B158DRAFT_0981 0.59 -0.4 1,014,126 - B158DRAFT_0981 0.59 +0.4 1,014,126 - B158DRAFT_0981 0.59 +0.7 1,014,126 - B158DRAFT_0981 0.59 -1.0 1,014,126 - B158DRAFT_0981 0.59 -0.4 1,014,166 + B158DRAFT_0981 0.64 -1.6 1,014,166 + B158DRAFT_0981 0.64 -0.2 1,014,166 + B158DRAFT_0981 0.64 -0.6 1,014,174 - B158DRAFT_0981 0.65 -0.9 1,014,174 - B158DRAFT_0981 0.65 +1.2 1,014,174 - B158DRAFT_0981 0.65 -0.2 1,014,174 - B158DRAFT_0981 0.65 -0.2 1,014,192 + B158DRAFT_0981 0.67 -0.7 1,014,207 - B158DRAFT_0981 0.68 -0.5 1,014,207 - B158DRAFT_0981 0.68 -0.9 1,014,241 + B158DRAFT_0981 0.72 -0.1 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 -0.2 1,014,241 + B158DRAFT_0981 0.72 -1.0 1,014,241 + B158DRAFT_0981 0.72 +0.5 1,014,241 + B158DRAFT_0981 0.72 -0.5 1,014,241 + B158DRAFT_0981 0.72 -0.5 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,241 + B158DRAFT_0981 0.72 +0.9 1,014,241 + B158DRAFT_0981 0.72 -1.0 1,014,241 + B158DRAFT_0981 0.72 -0.3 1,014,249 - B158DRAFT_0981 0.73 -0.9 1,014,249 - B158DRAFT_0981 0.73 -0.5 1,014,249 - B158DRAFT_0981 0.73 -0.1 1,014,249 - B158DRAFT_0981 0.73 -0.2 1,014,249 - B158DRAFT_0981 0.73 -0.1 1,014,249 - B158DRAFT_0981 0.73 -0.2 1,014,276 + B158DRAFT_0981 0.76 -0.1 1,014,281 + B158DRAFT_0981 0.76 -0.8 1,014,284 - B158DRAFT_0981 0.77 -0.4 1,014,298 + B158DRAFT_0981 0.78 -0.4 1,014,306 - B158DRAFT_0981 0.79 -0.2
Or see this region's nucleotide sequence