Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0979

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0978 and B158DRAFT_0979 are separated by 27 nucleotidesB158DRAFT_0979 and B158DRAFT_0980 are separated by 74 nucleotides B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036 _0978 B158DRAFT_0979: B158DRAFT_0979 - DNA topoisomerase IV, A subunit, proteobacterial, at 1,010,064 to 1,012,304 _0979 B158DRAFT_0980: B158DRAFT_0980 - hypothetical protein, at 1,012,379 to 1,013,335 _0980 Position (kb) 1010 1011 1012 1013Strain fitness (log2 ratio) -2 -1 0 1at 1012.280 kb on + strandat 1012.294 kb on - strandat 1012.298 kb on + strandat 1012.306 kb on - strandat 1012.306 kb on - strandat 1012.306 kb on - strandat 1012.306 kb on - strandat 1012.408 kb on + strandat 1012.408 kb on + strandat 1012.455 kb on + strandat 1012.455 kb on + strandat 1012.455 kb on + strandat 1012.455 kb on + strandat 1012.455 kb on + strandat 1012.463 kb on - strandat 1012.503 kb on + strand, within B158DRAFT_0980at 1012.503 kb on + strand, within B158DRAFT_0980at 1012.511 kb on + strand, within B158DRAFT_0980at 1012.534 kb on + strand, within B158DRAFT_0980at 1012.542 kb on - strand, within B158DRAFT_0980at 1012.627 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.644 kb on + strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.652 kb on - strand, within B158DRAFT_0980at 1012.791 kb on + strand, within B158DRAFT_0980at 1012.801 kb on + strand, within B158DRAFT_0980at 1012.801 kb on + strand, within B158DRAFT_0980at 1012.809 kb on - strand, within B158DRAFT_0980at 1012.809 kb on - strand, within B158DRAFT_0980at 1012.838 kb on + strand, within B158DRAFT_0980at 1012.838 kb on + strand, within B158DRAFT_0980at 1012.877 kb on + strand, within B158DRAFT_0980at 1012.909 kb on + strand, within B158DRAFT_0980at 1013.008 kb on + strand, within B158DRAFT_0980at 1013.069 kb on + strand, within B158DRAFT_0980at 1013.083 kb on + strand, within B158DRAFT_0980at 1013.093 kb on + strand, within B158DRAFT_0980at 1013.153 kb on + strand, within B158DRAFT_0980at 1013.158 kb on + strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.166 kb on - strand, within B158DRAFT_0980at 1013.178 kb on - strand, within B158DRAFT_0980at 1013.202 kb on - strand, within B158DRAFT_0980at 1013.221 kb on - strand, within B158DRAFT_0980at 1013.277 kb on + strandat 1013.285 kb on - strandat 1013.290 kb on - strandat 1013.290 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,012,280 + -0.2
1,012,294 - -2.1
1,012,298 + +0.1
1,012,306 - +0.1
1,012,306 - +0.0
1,012,306 - -0.1
1,012,306 - -0.1
1,012,408 + +0.4
1,012,408 + -0.2
1,012,455 + +0.4
1,012,455 + +0.5
1,012,455 + +0.2
1,012,455 + +0.8
1,012,455 + +1.5
1,012,463 - -0.2
1,012,503 + B158DRAFT_0980 0.13 +0.2
1,012,503 + B158DRAFT_0980 0.13 +0.6
1,012,511 + B158DRAFT_0980 0.14 +0.1
1,012,534 + B158DRAFT_0980 0.16 -0.6
1,012,542 - B158DRAFT_0980 0.17 -0.2
1,012,627 + B158DRAFT_0980 0.26 -0.6
1,012,644 + B158DRAFT_0980 0.28 +0.2
1,012,644 + B158DRAFT_0980 0.28 -0.0
1,012,644 + B158DRAFT_0980 0.28 -0.3
1,012,644 + B158DRAFT_0980 0.28 +0.1
1,012,644 + B158DRAFT_0980 0.28 +0.9
1,012,652 - B158DRAFT_0980 0.29 -0.3
1,012,652 - B158DRAFT_0980 0.29 +0.4
1,012,652 - B158DRAFT_0980 0.29 +0.7
1,012,652 - B158DRAFT_0980 0.29 -0.0
1,012,791 + B158DRAFT_0980 0.43 +0.1
1,012,801 + B158DRAFT_0980 0.44 +0.2
1,012,801 + B158DRAFT_0980 0.44 +0.7
1,012,809 - B158DRAFT_0980 0.45 -0.1
1,012,809 - B158DRAFT_0980 0.45 +0.6
1,012,838 + B158DRAFT_0980 0.48 +0.6
1,012,838 + B158DRAFT_0980 0.48 -0.4
1,012,877 + B158DRAFT_0980 0.52 +0.0
1,012,909 + B158DRAFT_0980 0.55 +1.1
1,013,008 + B158DRAFT_0980 0.66 +0.8
1,013,069 + B158DRAFT_0980 0.72 +0.5
1,013,083 + B158DRAFT_0980 0.74 -0.3
1,013,093 + B158DRAFT_0980 0.75 +1.0
1,013,153 + B158DRAFT_0980 0.81 -0.4
1,013,158 + B158DRAFT_0980 0.81 +0.9
1,013,166 - B158DRAFT_0980 0.82 +0.5
1,013,166 - B158DRAFT_0980 0.82 +0.2
1,013,166 - B158DRAFT_0980 0.82 +0.6
1,013,166 - B158DRAFT_0980 0.82 +0.9
1,013,166 - B158DRAFT_0980 0.82 +0.2
1,013,178 - B158DRAFT_0980 0.83 +0.9
1,013,202 - B158DRAFT_0980 0.86 +0.8
1,013,221 - B158DRAFT_0980 0.88 +0.9
1,013,277 + +0.3
1,013,285 - +0.8
1,013,290 - +0.6
1,013,290 - +0.8

Or see this region's nucleotide sequence