Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0701

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0699 and B158DRAFT_0700 overlap by 22 nucleotidesB158DRAFT_0700 and B158DRAFT_0701 are separated by 7 nucleotidesB158DRAFT_0701 and B158DRAFT_0702 are separated by 42 nucleotidesB158DRAFT_0702 and B158DRAFT_0703 are separated by 20 nucleotides B158DRAFT_0699: B158DRAFT_0699 - type II secretion system protein N (GspN), at 700,128 to 700,874 _0699 B158DRAFT_0700: B158DRAFT_0700 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 700,853 to 701,527 _0700 B158DRAFT_0701: B158DRAFT_0701 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 701,535 to 702,083 _0701 B158DRAFT_0702: B158DRAFT_0702 - hypothetical protein, at 702,126 to 702,656 _0702 B158DRAFT_0703: B158DRAFT_0703 - hypothetical protein, at 702,677 to 704,278 _0703 Position (kb) 701 702 703Strain fitness (log2 ratio) -1 0 1at 700.596 kb on - strand, within B158DRAFT_0699at 700.600 kb on + strand, within B158DRAFT_0699at 700.600 kb on + strand, within B158DRAFT_0699at 700.613 kb on - strand, within B158DRAFT_0699at 700.649 kb on + strand, within B158DRAFT_0699at 700.737 kb on - strand, within B158DRAFT_0699at 700.804 kb on - strandat 700.815 kb on + strandat 700.823 kb on - strandat 700.835 kb on + strandat 700.894 kb on + strandat 700.967 kb on - strand, within B158DRAFT_0700at 701.013 kb on - strand, within B158DRAFT_0700at 701.139 kb on + strand, within B158DRAFT_0700at 701.168 kb on - strand, within B158DRAFT_0700at 701.212 kb on + strand, within B158DRAFT_0700at 701.212 kb on + strand, within B158DRAFT_0700at 701.224 kb on + strand, within B158DRAFT_0700at 701.232 kb on - strand, within B158DRAFT_0700at 701.232 kb on - strand, within B158DRAFT_0700at 701.281 kb on + strand, within B158DRAFT_0700at 701.281 kb on + strand, within B158DRAFT_0700at 701.289 kb on - strand, within B158DRAFT_0700at 701.309 kb on + strand, within B158DRAFT_0700at 701.434 kb on + strand, within B158DRAFT_0700at 701.463 kb on - strandat 701.488 kb on - strandat 701.545 kb on - strandat 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.648 kb on + strand, within B158DRAFT_0701at 701.656 kb on - strand, within B158DRAFT_0701at 701.656 kb on - strand, within B158DRAFT_0701at 701.688 kb on + strand, within B158DRAFT_0701at 701.781 kb on + strand, within B158DRAFT_0701at 701.841 kb on - strand, within B158DRAFT_0701at 701.877 kb on - strand, within B158DRAFT_0701at 702.314 kb on + strand, within B158DRAFT_0702at 702.370 kb on - strand, within B158DRAFT_0702at 702.371 kb on + strand, within B158DRAFT_0702at 702.479 kb on - strand, within B158DRAFT_0702at 702.550 kb on - strand, within B158DRAFT_0702at 702.691 kb on + strandat 702.719 kb on + strandat 702.719 kb on + strandat 702.905 kb on - strand, within B158DRAFT_0703at 702.926 kb on - strand, within B158DRAFT_0703at 702.986 kb on + strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 702.994 kb on - strand, within B158DRAFT_0703at 703.041 kb on - strand, within B158DRAFT_0703

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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700,596 - B158DRAFT_0699 0.63 +0.1
700,600 + B158DRAFT_0699 0.63 -0.2
700,600 + B158DRAFT_0699 0.63 +0.3
700,613 - B158DRAFT_0699 0.65 +0.1
700,649 + B158DRAFT_0699 0.70 -0.1
700,737 - B158DRAFT_0699 0.82 -0.6
700,804 - +0.2
700,815 + -0.1
700,823 - -0.3
700,835 + +1.1
700,894 + -0.0
700,967 - B158DRAFT_0700 0.17 +0.4
701,013 - B158DRAFT_0700 0.24 -0.6
701,139 + B158DRAFT_0700 0.42 -0.4
701,168 - B158DRAFT_0700 0.47 -0.3
701,212 + B158DRAFT_0700 0.53 +0.3
701,212 + B158DRAFT_0700 0.53 -0.1
701,224 + B158DRAFT_0700 0.55 +0.2
701,232 - B158DRAFT_0700 0.56 -0.6
701,232 - B158DRAFT_0700 0.56 -0.1
701,281 + B158DRAFT_0700 0.63 -0.9
701,281 + B158DRAFT_0700 0.63 +0.1
701,289 - B158DRAFT_0700 0.65 -0.6
701,309 + B158DRAFT_0700 0.68 -0.2
701,434 + B158DRAFT_0700 0.86 -0.2
701,463 - -0.4
701,488 - -0.2
701,545 - -0.3
701,648 + B158DRAFT_0701 0.21 -0.4
701,648 + B158DRAFT_0701 0.21 -0.1
701,648 + B158DRAFT_0701 0.21 -0.2
701,648 + B158DRAFT_0701 0.21 -0.4
701,648 + B158DRAFT_0701 0.21 -0.1
701,648 + B158DRAFT_0701 0.21 -0.7
701,656 - B158DRAFT_0701 0.22 -0.3
701,656 - B158DRAFT_0701 0.22 +0.3
701,688 + B158DRAFT_0701 0.28 -0.5
701,781 + B158DRAFT_0701 0.45 -0.3
701,841 - B158DRAFT_0701 0.56 +0.0
701,877 - B158DRAFT_0701 0.62 -0.1
702,314 + B158DRAFT_0702 0.35 +0.2
702,370 - B158DRAFT_0702 0.46 -0.1
702,371 + B158DRAFT_0702 0.46 +0.0
702,479 - B158DRAFT_0702 0.66 +0.2
702,550 - B158DRAFT_0702 0.80 +0.5
702,691 + -0.2
702,719 + +0.1
702,719 + +0.3
702,905 - B158DRAFT_0703 0.14 -0.2
702,926 - B158DRAFT_0703 0.16 -0.2
702,986 + B158DRAFT_0703 0.19 -0.1
702,994 - B158DRAFT_0703 0.20 +0.5
702,994 - B158DRAFT_0703 0.20 +0.0
703,041 - B158DRAFT_0703 0.23 -0.7

Or see this region's nucleotide sequence