Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0664

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0662 and B158DRAFT_0663 are separated by 186 nucleotidesB158DRAFT_0663 and B158DRAFT_0664 overlap by 39 nucleotidesB158DRAFT_0664 and B158DRAFT_0665 are separated by 84 nucleotidesB158DRAFT_0665 and B158DRAFT_0666 are separated by 14 nucleotides B158DRAFT_0662: B158DRAFT_0662 - DNA-binding winged-HTH domains, at 667,231 to 667,881 _0662 B158DRAFT_0663: B158DRAFT_0663 - hypothetical protein, at 668,068 to 668,196 _0663 B158DRAFT_0664: B158DRAFT_0664 - ADP-heptose:LPS heptosyltransferase, at 668,158 to 669,240 _0664 B158DRAFT_0665: B158DRAFT_0665 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 669,325 to 670,035 _0665 B158DRAFT_0666: B158DRAFT_0666 - Protein of unknown function (DUF3667)., at 670,050 to 671,102 _0666 Position (kb) 668 669 670Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 667.169 kb on + strandat 667.169 kb on + strandat 667.169 kb on - strandat 667.227 kb on + strandat 667.230 kb on - strandat 667.233 kb on + strandat 667.241 kb on - strandat 667.241 kb on - strandat 667.250 kb on + strandat 667.250 kb on + strandat 667.250 kb on + strandat 667.277 kb on + strandat 667.282 kb on + strandat 667.290 kb on - strandat 667.290 kb on - strandat 667.305 kb on - strand, within B158DRAFT_0662at 667.469 kb on + strand, within B158DRAFT_0662at 667.469 kb on + strand, within B158DRAFT_0662at 667.469 kb on + strand, within B158DRAFT_0662at 667.469 kb on + strand, within B158DRAFT_0662at 667.469 kb on + strand, within B158DRAFT_0662at 667.469 kb on - strand, within B158DRAFT_0662at 667.477 kb on - strand, within B158DRAFT_0662at 667.477 kb on - strand, within B158DRAFT_0662at 667.477 kb on - strand, within B158DRAFT_0662at 667.479 kb on + strand, within B158DRAFT_0662at 667.487 kb on - strand, within B158DRAFT_0662at 667.487 kb on - strand, within B158DRAFT_0662at 667.506 kb on - strand, within B158DRAFT_0662at 667.527 kb on - strand, within B158DRAFT_0662at 667.527 kb on - strand, within B158DRAFT_0662at 667.534 kb on - strand, within B158DRAFT_0662at 667.539 kb on + strand, within B158DRAFT_0662at 667.546 kb on - strand, within B158DRAFT_0662at 667.631 kb on + strand, within B158DRAFT_0662at 667.694 kb on - strand, within B158DRAFT_0662at 667.716 kb on + strand, within B158DRAFT_0662at 667.721 kb on + strand, within B158DRAFT_0662at 667.732 kb on - strand, within B158DRAFT_0662at 667.747 kb on - strand, within B158DRAFT_0662at 667.767 kb on + strand, within B158DRAFT_0662at 667.941 kb on - strandat 667.941 kb on - strandat 668.073 kb on + strandat 668.073 kb on + strandat 668.081 kb on - strand, within B158DRAFT_0663at 668.081 kb on - strand, within B158DRAFT_0663at 668.081 kb on - strand, within B158DRAFT_0663at 668.149 kb on + strand, within B158DRAFT_0663at 668.155 kb on + strand, within B158DRAFT_0663at 668.178 kb on - strandat 668.235 kb on + strandat 668.235 kb on + strandat 668.243 kb on - strandat 668.243 kb on - strandat 668.266 kb on - strandat 668.282 kb on + strand, within B158DRAFT_0664at 668.301 kb on - strand, within B158DRAFT_0664at 668.301 kb on - strand, within B158DRAFT_0664at 668.346 kb on - strand, within B158DRAFT_0664at 668.369 kb on + strand, within B158DRAFT_0664at 668.392 kb on - strand, within B158DRAFT_0664at 668.398 kb on + strand, within B158DRAFT_0664at 668.444 kb on + strand, within B158DRAFT_0664at 668.446 kb on + strand, within B158DRAFT_0664at 668.453 kb on - strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.477 kb on + strand, within B158DRAFT_0664at 668.485 kb on - strand, within B158DRAFT_0664at 668.485 kb on - strand, within B158DRAFT_0664at 668.485 kb on - strand, within B158DRAFT_0664at 668.485 kb on - strand, within B158DRAFT_0664at 668.486 kb on - strand, within B158DRAFT_0664at 668.558 kb on + strand, within B158DRAFT_0664at 668.585 kb on - strand, within B158DRAFT_0664at 668.585 kb on - strand, within B158DRAFT_0664at 668.607 kb on + strand, within B158DRAFT_0664at 668.607 kb on + strand, within B158DRAFT_0664at 668.607 kb on + strand, within B158DRAFT_0664at 668.607 kb on - strand, within B158DRAFT_0664at 668.615 kb on - strand, within B158DRAFT_0664at 668.640 kb on + strand, within B158DRAFT_0664at 668.675 kb on + strand, within B158DRAFT_0664at 668.687 kb on - strand, within B158DRAFT_0664at 668.709 kb on - strand, within B158DRAFT_0664at 668.740 kb on - strand, within B158DRAFT_0664at 668.740 kb on - strand, within B158DRAFT_0664at 668.747 kb on + strand, within B158DRAFT_0664at 668.875 kb on + strand, within B158DRAFT_0664at 668.996 kb on + strand, within B158DRAFT_0664at 669.010 kb on - strand, within B158DRAFT_0664at 669.032 kb on + strand, within B158DRAFT_0664at 669.049 kb on + strand, within B158DRAFT_0664at 669.120 kb on - strand, within B158DRAFT_0664at 669.141 kb on + strandat 669.162 kb on + strandat 669.311 kb on - strandat 669.434 kb on - strand, within B158DRAFT_0665at 669.445 kb on + strand, within B158DRAFT_0665at 669.464 kb on - strand, within B158DRAFT_0665at 669.539 kb on + strand, within B158DRAFT_0665at 669.539 kb on + strand, within B158DRAFT_0665at 669.547 kb on - strand, within B158DRAFT_0665at 669.548 kb on + strand, within B158DRAFT_0665at 669.582 kb on + strand, within B158DRAFT_0665at 669.582 kb on + strand, within B158DRAFT_0665at 669.590 kb on - strand, within B158DRAFT_0665at 669.590 kb on - strand, within B158DRAFT_0665at 669.632 kb on - strand, within B158DRAFT_0665at 669.695 kb on + strand, within B158DRAFT_0665at 669.695 kb on + strand, within B158DRAFT_0665at 669.703 kb on - strand, within B158DRAFT_0665at 669.703 kb on - strand, within B158DRAFT_0665at 669.703 kb on - strand, within B158DRAFT_0665at 669.705 kb on + strand, within B158DRAFT_0665at 669.714 kb on - strand, within B158DRAFT_0665at 669.763 kb on - strand, within B158DRAFT_0665at 669.864 kb on + strand, within B158DRAFT_0665at 669.869 kb on + strand, within B158DRAFT_0665at 669.909 kb on - strand, within B158DRAFT_0665at 670.022 kb on + strandat 670.023 kb on + strandat 670.030 kb on + strandat 670.030 kb on + strandat 670.030 kb on + strandat 670.030 kb on + strandat 670.038 kb on - strandat 670.056 kb on - strandat 670.076 kb on - strandat 670.135 kb on - strandat 670.136 kb on + strandat 670.180 kb on + strand, within B158DRAFT_0666at 670.180 kb on + strand, within B158DRAFT_0666at 670.188 kb on - strand, within B158DRAFT_0666at 670.204 kb on - strand, within B158DRAFT_0666

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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667,169 + -0.1
667,169 + -0.4
667,169 - -0.3
667,227 + -0.9
667,230 - -0.3
667,233 + -0.1
667,241 - -0.9
667,241 - -0.7
667,250 + +0.9
667,250 + -0.3
667,250 + +0.2
667,277 + +0.1
667,282 + -0.3
667,290 - -0.6
667,290 - -0.2
667,305 - B158DRAFT_0662 0.11 -0.3
667,469 + B158DRAFT_0662 0.37 -0.3
667,469 + B158DRAFT_0662 0.37 +0.0
667,469 + B158DRAFT_0662 0.37 -0.6
667,469 + B158DRAFT_0662 0.37 +0.4
667,469 + B158DRAFT_0662 0.37 -0.1
667,469 - B158DRAFT_0662 0.37 -0.5
667,477 - B158DRAFT_0662 0.38 -0.3
667,477 - B158DRAFT_0662 0.38 +0.3
667,477 - B158DRAFT_0662 0.38 +0.1
667,479 + B158DRAFT_0662 0.38 +0.0
667,487 - B158DRAFT_0662 0.39 +0.0
667,487 - B158DRAFT_0662 0.39 -0.3
667,506 - B158DRAFT_0662 0.42 -0.2
667,527 - B158DRAFT_0662 0.45 -0.2
667,527 - B158DRAFT_0662 0.45 -0.1
667,534 - B158DRAFT_0662 0.47 -0.2
667,539 + B158DRAFT_0662 0.47 -0.4
667,546 - B158DRAFT_0662 0.48 -1.3
667,631 + B158DRAFT_0662 0.61 -0.4
667,694 - B158DRAFT_0662 0.71 -0.4
667,716 + B158DRAFT_0662 0.75 -0.1
667,721 + B158DRAFT_0662 0.75 +0.5
667,732 - B158DRAFT_0662 0.77 +0.2
667,747 - B158DRAFT_0662 0.79 +0.6
667,767 + B158DRAFT_0662 0.82 -0.4
667,941 - -0.3
667,941 - +0.1
668,073 + +0.3
668,073 + -0.1
668,081 - B158DRAFT_0663 0.10 -0.3
668,081 - B158DRAFT_0663 0.10 -0.6
668,081 - B158DRAFT_0663 0.10 -1.2
668,149 + B158DRAFT_0663 0.63 -0.4
668,155 + B158DRAFT_0663 0.67 +0.1
668,178 - -0.4
668,235 + -4.0
668,235 + -3.2
668,243 - -4.3
668,243 - -0.7
668,266 - -3.0
668,282 + B158DRAFT_0664 0.11 -3.1
668,301 - B158DRAFT_0664 0.13 -5.2
668,301 - B158DRAFT_0664 0.13 -5.3
668,346 - B158DRAFT_0664 0.17 -3.6
668,369 + B158DRAFT_0664 0.19 -5.4
668,392 - B158DRAFT_0664 0.22 -4.2
668,398 + B158DRAFT_0664 0.22 -3.9
668,444 + B158DRAFT_0664 0.26 -5.6
668,446 + B158DRAFT_0664 0.27 -5.1
668,453 - B158DRAFT_0664 0.27 -3.0
668,477 + B158DRAFT_0664 0.29 -3.4
668,477 + B158DRAFT_0664 0.29 -4.7
668,477 + B158DRAFT_0664 0.29 -2.9
668,477 + B158DRAFT_0664 0.29 -4.0
668,477 + B158DRAFT_0664 0.29 -4.4
668,477 + B158DRAFT_0664 0.29 -4.8
668,477 + B158DRAFT_0664 0.29 -5.4
668,485 - B158DRAFT_0664 0.30 -3.4
668,485 - B158DRAFT_0664 0.30 -4.2
668,485 - B158DRAFT_0664 0.30 -1.4
668,485 - B158DRAFT_0664 0.30 -3.1
668,486 - B158DRAFT_0664 0.30 -3.0
668,558 + B158DRAFT_0664 0.37 -1.9
668,585 - B158DRAFT_0664 0.39 -4.6
668,585 - B158DRAFT_0664 0.39 -4.8
668,607 + B158DRAFT_0664 0.41 -4.2
668,607 + B158DRAFT_0664 0.41 -3.0
668,607 + B158DRAFT_0664 0.41 -5.4
668,607 - B158DRAFT_0664 0.41 -2.6
668,615 - B158DRAFT_0664 0.42 -4.1
668,640 + B158DRAFT_0664 0.45 -4.7
668,675 + B158DRAFT_0664 0.48 -5.3
668,687 - B158DRAFT_0664 0.49 -4.1
668,709 - B158DRAFT_0664 0.51 -5.8
668,740 - B158DRAFT_0664 0.54 -2.7
668,740 - B158DRAFT_0664 0.54 -3.5
668,747 + B158DRAFT_0664 0.54 -3.6
668,875 + B158DRAFT_0664 0.66 -3.2
668,996 + B158DRAFT_0664 0.77 -4.7
669,010 - B158DRAFT_0664 0.79 -4.9
669,032 + B158DRAFT_0664 0.81 -4.4
669,049 + B158DRAFT_0664 0.82 -3.2
669,120 - B158DRAFT_0664 0.89 -3.1
669,141 + -4.7
669,162 + -3.9
669,311 - +0.4
669,434 - B158DRAFT_0665 0.15 +0.0
669,445 + B158DRAFT_0665 0.17 -0.2
669,464 - B158DRAFT_0665 0.20 +0.2
669,539 + B158DRAFT_0665 0.30 +0.1
669,539 + B158DRAFT_0665 0.30 +0.3
669,547 - B158DRAFT_0665 0.31 +0.7
669,548 + B158DRAFT_0665 0.31 +0.3
669,582 + B158DRAFT_0665 0.36 +0.1
669,582 + B158DRAFT_0665 0.36 +0.5
669,590 - B158DRAFT_0665 0.37 +1.1
669,590 - B158DRAFT_0665 0.37 +0.7
669,632 - B158DRAFT_0665 0.43 +1.1
669,695 + B158DRAFT_0665 0.52 +0.6
669,695 + B158DRAFT_0665 0.52 +0.2
669,703 - B158DRAFT_0665 0.53 -0.1
669,703 - B158DRAFT_0665 0.53 +0.6
669,703 - B158DRAFT_0665 0.53 -0.1
669,705 + B158DRAFT_0665 0.53 -0.5
669,714 - B158DRAFT_0665 0.55 +0.4
669,763 - B158DRAFT_0665 0.62 +0.1
669,864 + B158DRAFT_0665 0.76 +0.6
669,869 + B158DRAFT_0665 0.77 +0.3
669,909 - B158DRAFT_0665 0.82 -0.3
670,022 + +0.5
670,023 + +0.9
670,030 + -0.4
670,030 + -0.3
670,030 + -0.1
670,030 + +0.3
670,038 - +0.2
670,056 - -1.0
670,076 - -0.9
670,135 - -0.8
670,136 + -0.7
670,180 + B158DRAFT_0666 0.12 +0.3
670,180 + B158DRAFT_0666 0.12 +0.4
670,188 - B158DRAFT_0666 0.13 -0.1
670,204 - B158DRAFT_0666 0.15 +0.5

Or see this region's nucleotide sequence