Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0512

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0511 and B158DRAFT_0512 are separated by 227 nucleotidesB158DRAFT_0512 and B158DRAFT_0513 overlap by 4 nucleotides B158DRAFT_0511: B158DRAFT_0511 - glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12), at 519,625 to 520,626 _0511 B158DRAFT_0512: B158DRAFT_0512 - hypothetical protein, at 520,854 to 521,003 _0512 B158DRAFT_0513: B158DRAFT_0513 - phosphoglycerate kinase (EC 2.7.2.3), at 521,000 to 522,178 _0513 Position (kb) 520 521 522Strain fitness (log2 ratio) -2 -1 0 1at 520.775 kb on + strandat 520.805 kb on + strandat 520.877 kb on + strand, within B158DRAFT_0512at 520.882 kb on + strand, within B158DRAFT_0512at 520.882 kb on + strand, within B158DRAFT_0512at 520.890 kb on - strand, within B158DRAFT_0512at 520.998 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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520,775 + -0.4
520,805 + -0.0
520,877 + B158DRAFT_0512 0.15 +0.1
520,882 + B158DRAFT_0512 0.19 -0.7
520,882 + B158DRAFT_0512 0.19 -2.6
520,890 - B158DRAFT_0512 0.24 -1.4
520,998 + -0.9

Or see this region's nucleotide sequence