Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0445

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0444 and B158DRAFT_0445 are separated by 142 nucleotidesB158DRAFT_0445 and B158DRAFT_0446 are separated by 29 nucleotidesB158DRAFT_0446 and B158DRAFT_0447 are separated by 70 nucleotides B158DRAFT_0444: B158DRAFT_0444 - hypothetical protein, at 445,928 to 446,884 _0444 B158DRAFT_0445: B158DRAFT_0445 - Parvulin-like peptidyl-prolyl isomerase, at 447,027 to 447,314 _0445 B158DRAFT_0446: B158DRAFT_0446 - Adenine-specific DNA methylase, at 447,344 to 448,060 _0446 B158DRAFT_0447: B158DRAFT_0447 - Pseudouridylate synthases, 23S RNA-specific, at 448,131 to 448,988 _0447 Position (kb) 447 448Strain fitness (log2 ratio) -2 -1 0 1 2at 446.060 kb on + strand, within B158DRAFT_0444at 446.068 kb on - strand, within B158DRAFT_0444at 446.184 kb on - strand, within B158DRAFT_0444at 446.202 kb on - strand, within B158DRAFT_0444at 446.319 kb on + strand, within B158DRAFT_0444at 446.327 kb on - strand, within B158DRAFT_0444at 446.521 kb on + strand, within B158DRAFT_0444at 446.523 kb on + strand, within B158DRAFT_0444at 446.529 kb on - strand, within B158DRAFT_0444at 446.594 kb on - strand, within B158DRAFT_0444at 446.656 kb on - strand, within B158DRAFT_0444at 446.688 kb on + strand, within B158DRAFT_0444at 446.722 kb on + strand, within B158DRAFT_0444at 446.733 kb on + strand, within B158DRAFT_0444at 446.763 kb on - strand, within B158DRAFT_0444at 446.776 kb on - strand, within B158DRAFT_0444at 446.824 kb on - strandat 447.046 kb on + strandat 447.072 kb on + strand, within B158DRAFT_0445at 447.102 kb on - strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.135 kb on + strand, within B158DRAFT_0445at 447.136 kb on + strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.143 kb on - strand, within B158DRAFT_0445at 447.277 kb on + strand, within B158DRAFT_0445at 447.291 kb on + strandat 447.299 kb on - strandat 447.299 kb on - strandat 447.330 kb on - strandat 447.381 kb on - strandat 447.447 kb on + strand, within B158DRAFT_0446at 447.476 kb on + strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.484 kb on - strand, within B158DRAFT_0446at 447.511 kb on + strand, within B158DRAFT_0446at 447.628 kb on + strand, within B158DRAFT_0446at 447.646 kb on - strand, within B158DRAFT_0446at 447.688 kb on + strand, within B158DRAFT_0446at 447.693 kb on + strand, within B158DRAFT_0446at 447.738 kb on + strand, within B158DRAFT_0446at 447.764 kb on - strand, within B158DRAFT_0446at 447.793 kb on + strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.801 kb on - strand, within B158DRAFT_0446at 447.809 kb on + strand, within B158DRAFT_0446at 447.817 kb on - strand, within B158DRAFT_0446at 447.937 kb on - strand, within B158DRAFT_0446at 447.960 kb on + strand, within B158DRAFT_0446at 448.032 kb on + strandat 448.033 kb on + strandat 448.075 kb on + strandat 448.186 kb on + strandat 448.193 kb on - strandat 448.250 kb on - strand, within B158DRAFT_0447

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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446,060 + B158DRAFT_0444 0.14 -0.1
446,068 - B158DRAFT_0444 0.15 -2.4
446,184 - B158DRAFT_0444 0.27 +1.9
446,202 - B158DRAFT_0444 0.29 -0.5
446,319 + B158DRAFT_0444 0.41 -0.3
446,327 - B158DRAFT_0444 0.42 -0.3
446,521 + B158DRAFT_0444 0.62 -0.1
446,523 + B158DRAFT_0444 0.62 +0.0
446,529 - B158DRAFT_0444 0.63 -0.2
446,594 - B158DRAFT_0444 0.70 -0.8
446,656 - B158DRAFT_0444 0.76 -0.1
446,688 + B158DRAFT_0444 0.79 +0.5
446,722 + B158DRAFT_0444 0.83 -1.8
446,733 + B158DRAFT_0444 0.84 -0.2
446,763 - B158DRAFT_0444 0.87 -0.2
446,776 - B158DRAFT_0444 0.89 -0.2
446,824 - -0.5
447,046 + -0.2
447,072 + B158DRAFT_0445 0.16 -0.7
447,102 - B158DRAFT_0445 0.26 +0.2
447,135 + B158DRAFT_0445 0.38 -0.0
447,135 + B158DRAFT_0445 0.38 +0.4
447,136 + B158DRAFT_0445 0.38 -0.1
447,143 - B158DRAFT_0445 0.40 -0.1
447,143 - B158DRAFT_0445 0.40 -0.5
447,277 + B158DRAFT_0445 0.87 -1.8
447,291 + +0.3
447,299 - -0.0
447,299 - -0.1
447,330 - +0.8
447,381 - +0.1
447,447 + B158DRAFT_0446 0.14 +0.6
447,476 + B158DRAFT_0446 0.18 +0.4
447,484 - B158DRAFT_0446 0.20 +0.1
447,484 - B158DRAFT_0446 0.20 +0.1
447,511 + B158DRAFT_0446 0.23 +0.0
447,628 + B158DRAFT_0446 0.40 -0.0
447,646 - B158DRAFT_0446 0.42 -0.4
447,688 + B158DRAFT_0446 0.48 -0.1
447,693 + B158DRAFT_0446 0.49 -0.6
447,738 + B158DRAFT_0446 0.55 -0.6
447,764 - B158DRAFT_0446 0.59 -0.3
447,793 + B158DRAFT_0446 0.63 -0.0
447,801 - B158DRAFT_0446 0.64 +0.1
447,801 - B158DRAFT_0446 0.64 -0.5
447,801 - B158DRAFT_0446 0.64 -0.2
447,801 - B158DRAFT_0446 0.64 -0.8
447,801 - B158DRAFT_0446 0.64 -0.6
447,801 - B158DRAFT_0446 0.64 -0.1
447,801 - B158DRAFT_0446 0.64 -0.3
447,801 - B158DRAFT_0446 0.64 -0.3
447,801 - B158DRAFT_0446 0.64 -0.1
447,801 - B158DRAFT_0446 0.64 +0.4
447,809 + B158DRAFT_0446 0.65 -0.1
447,817 - B158DRAFT_0446 0.66 -1.1
447,937 - B158DRAFT_0446 0.83 +0.1
447,960 + B158DRAFT_0446 0.86 +0.5
448,032 + -0.5
448,033 + +0.1
448,075 + +1.2
448,186 + -0.7
448,193 - +0.4
448,250 - B158DRAFT_0447 0.14 -0.7

Or see this region's nucleotide sequence