Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0295

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0294 and B158DRAFT_0295 are separated by 33 nucleotidesB158DRAFT_0295 and B158DRAFT_0296 are separated by 394 nucleotides B158DRAFT_0294: B158DRAFT_0294 - glycine oxidase (EC 1.4.3.19), at 296,473 to 297,528 _0294 B158DRAFT_0295: B158DRAFT_0295 - hydroxymethylpyrimidine synthase, at 297,562 to 299,445 _0295 B158DRAFT_0296: B158DRAFT_0296 - Uncharacterized protein conserved in bacteria, at 299,840 to 300,304 _0296 Position (kb) 297 298 299 300Strain fitness (log2 ratio) -2 -1 0 1at 296.629 kb on + strand, within B158DRAFT_0294at 296.699 kb on + strand, within B158DRAFT_0294at 296.701 kb on + strand, within B158DRAFT_0294at 296.845 kb on + strand, within B158DRAFT_0294at 296.845 kb on + strand, within B158DRAFT_0294at 296.860 kb on + strand, within B158DRAFT_0294at 296.979 kb on - strand, within B158DRAFT_0294at 297.005 kb on - strand, within B158DRAFT_0294at 297.065 kb on + strand, within B158DRAFT_0294at 297.065 kb on + strand, within B158DRAFT_0294at 297.073 kb on - strand, within B158DRAFT_0294at 297.083 kb on - strand, within B158DRAFT_0294at 297.083 kb on - strand, within B158DRAFT_0294at 297.185 kb on + strand, within B158DRAFT_0294at 297.241 kb on + strand, within B158DRAFT_0294at 297.242 kb on - strand, within B158DRAFT_0294at 297.243 kb on - strand, within B158DRAFT_0294at 297.393 kb on - strand, within B158DRAFT_0294at 297.523 kb on - strandat 297.710 kb on + strandat 297.710 kb on + strandat 297.718 kb on - strandat 297.718 kb on - strandat 297.718 kb on - strandat 297.718 kb on - strandat 297.785 kb on + strand, within B158DRAFT_0295at 297.796 kb on + strand, within B158DRAFT_0295at 297.848 kb on - strand, within B158DRAFT_0295at 297.860 kb on + strand, within B158DRAFT_0295at 297.879 kb on + strand, within B158DRAFT_0295at 297.943 kb on - strand, within B158DRAFT_0295at 297.968 kb on + strand, within B158DRAFT_0295at 297.971 kb on - strand, within B158DRAFT_0295at 297.978 kb on + strand, within B158DRAFT_0295at 298.032 kb on + strand, within B158DRAFT_0295at 298.041 kb on - strand, within B158DRAFT_0295at 298.078 kb on + strand, within B158DRAFT_0295at 298.245 kb on - strand, within B158DRAFT_0295at 298.256 kb on - strand, within B158DRAFT_0295at 298.318 kb on + strand, within B158DRAFT_0295at 298.367 kb on - strand, within B158DRAFT_0295at 298.367 kb on - strand, within B158DRAFT_0295at 298.431 kb on + strand, within B158DRAFT_0295at 298.480 kb on + strand, within B158DRAFT_0295at 298.515 kb on + strand, within B158DRAFT_0295at 298.515 kb on - strand, within B158DRAFT_0295at 298.522 kb on + strand, within B158DRAFT_0295at 298.530 kb on - strand, within B158DRAFT_0295at 298.603 kb on - strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.605 kb on + strand, within B158DRAFT_0295at 298.607 kb on + strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.613 kb on - strand, within B158DRAFT_0295at 298.679 kb on + strand, within B158DRAFT_0295at 298.687 kb on - strand, within B158DRAFT_0295at 298.827 kb on - strand, within B158DRAFT_0295at 298.931 kb on - strand, within B158DRAFT_0295at 299.014 kb on + strand, within B158DRAFT_0295at 299.054 kb on + strand, within B158DRAFT_0295at 299.054 kb on + strand, within B158DRAFT_0295at 299.062 kb on - strand, within B158DRAFT_0295at 299.062 kb on - strand, within B158DRAFT_0295at 299.067 kb on + strand, within B158DRAFT_0295at 299.075 kb on - strand, within B158DRAFT_0295at 299.075 kb on - strand, within B158DRAFT_0295at 299.131 kb on - strand, within B158DRAFT_0295at 299.164 kb on + strand, within B158DRAFT_0295at 299.186 kb on - strand, within B158DRAFT_0295at 299.191 kb on + strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.233 kb on - strand, within B158DRAFT_0295at 299.237 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.248 kb on + strand, within B158DRAFT_0295at 299.250 kb on + strand, within B158DRAFT_0295at 299.250 kb on + strand, within B158DRAFT_0295at 299.254 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.262 kb on + strandat 299.316 kb on + strandat 299.358 kb on - strandat 299.359 kb on - strandat 299.366 kb on - strandat 299.462 kb on + strandat 299.523 kb on + strandat 299.528 kb on + strandat 299.528 kb on + strandat 299.561 kb on - strandat 299.630 kb on + strandat 299.711 kb on - strandat 299.711 kb on - strandat 299.756 kb on + strandat 299.759 kb on + strandat 299.845 kb on + strandat 299.878 kb on - strandat 299.878 kb on - strandat 299.878 kb on - strandat 299.882 kb on + strandat 299.882 kb on + strandat 299.941 kb on - strand, within B158DRAFT_0296at 299.965 kb on + strand, within B158DRAFT_0296at 299.978 kb on + strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.991 kb on - strand, within B158DRAFT_0296at 300.064 kb on - strand, within B158DRAFT_0296at 300.105 kb on - strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.188 kb on - strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.195 kb on + strand, within B158DRAFT_0296at 300.198 kb on - strand, within B158DRAFT_0296at 300.209 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.253 kb on - strand, within B158DRAFT_0296at 300.263 kb on - strandat 300.263 kb on - strandat 300.265 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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296,629 + B158DRAFT_0294 0.15 +1.2
296,699 + B158DRAFT_0294 0.21 +0.0
296,701 + B158DRAFT_0294 0.22 +1.0
296,845 + B158DRAFT_0294 0.35 +0.3
296,845 + B158DRAFT_0294 0.35 +1.1
296,860 + B158DRAFT_0294 0.37 +0.7
296,979 - B158DRAFT_0294 0.48 +1.0
297,005 - B158DRAFT_0294 0.50 +0.8
297,065 + B158DRAFT_0294 0.56 -0.8
297,065 + B158DRAFT_0294 0.56 +0.6
297,073 - B158DRAFT_0294 0.57 -0.2
297,083 - B158DRAFT_0294 0.58 +0.5
297,083 - B158DRAFT_0294 0.58 -0.7
297,185 + B158DRAFT_0294 0.67 +0.1
297,241 + B158DRAFT_0294 0.73 +0.0
297,242 - B158DRAFT_0294 0.73 -0.0
297,243 - B158DRAFT_0294 0.73 -0.6
297,393 - B158DRAFT_0294 0.87 +0.2
297,523 - -0.1
297,710 + +0.2
297,710 + +0.7
297,718 - -0.1
297,718 - -0.5
297,718 - +0.7
297,718 - +0.4
297,785 + B158DRAFT_0295 0.12 +0.1
297,796 + B158DRAFT_0295 0.12 +0.3
297,848 - B158DRAFT_0295 0.15 +0.2
297,860 + B158DRAFT_0295 0.16 -1.2
297,879 + B158DRAFT_0295 0.17 +1.7
297,943 - B158DRAFT_0295 0.20 +1.1
297,968 + B158DRAFT_0295 0.22 +0.5
297,971 - B158DRAFT_0295 0.22 +0.7
297,978 + B158DRAFT_0295 0.22 +0.1
298,032 + B158DRAFT_0295 0.25 -0.6
298,041 - B158DRAFT_0295 0.25 +0.4
298,078 + B158DRAFT_0295 0.27 +0.5
298,245 - B158DRAFT_0295 0.36 +0.8
298,256 - B158DRAFT_0295 0.37 +0.0
298,318 + B158DRAFT_0295 0.40 +0.6
298,367 - B158DRAFT_0295 0.43 -0.7
298,367 - B158DRAFT_0295 0.43 +0.6
298,431 + B158DRAFT_0295 0.46 +0.0
298,480 + B158DRAFT_0295 0.49 +0.4
298,515 + B158DRAFT_0295 0.51 +0.1
298,515 - B158DRAFT_0295 0.51 +0.8
298,522 + B158DRAFT_0295 0.51 -0.9
298,530 - B158DRAFT_0295 0.51 +0.2
298,603 - B158DRAFT_0295 0.55 +0.7
298,605 + B158DRAFT_0295 0.55 +0.5
298,605 + B158DRAFT_0295 0.55 +0.7
298,605 + B158DRAFT_0295 0.55 +0.4
298,605 + B158DRAFT_0295 0.55 +0.6
298,605 + B158DRAFT_0295 0.55 +0.1
298,605 + B158DRAFT_0295 0.55 +0.6
298,605 + B158DRAFT_0295 0.55 +0.3
298,605 + B158DRAFT_0295 0.55 -0.1
298,607 + B158DRAFT_0295 0.55 +0.1
298,613 - B158DRAFT_0295 0.56 +0.3
298,613 - B158DRAFT_0295 0.56 +0.9
298,613 - B158DRAFT_0295 0.56 -0.7
298,613 - B158DRAFT_0295 0.56 -2.1
298,613 - B158DRAFT_0295 0.56 +0.9
298,613 - B158DRAFT_0295 0.56 +1.0
298,679 + B158DRAFT_0295 0.59 +0.0
298,687 - B158DRAFT_0295 0.60 +0.4
298,827 - B158DRAFT_0295 0.67 +0.1
298,931 - B158DRAFT_0295 0.73 +0.7
299,014 + B158DRAFT_0295 0.77 +1.1
299,054 + B158DRAFT_0295 0.79 -0.2
299,054 + B158DRAFT_0295 0.79 -2.1
299,062 - B158DRAFT_0295 0.80 +0.9
299,062 - B158DRAFT_0295 0.80 -0.1
299,067 + B158DRAFT_0295 0.80 -0.8
299,075 - B158DRAFT_0295 0.80 -0.3
299,075 - B158DRAFT_0295 0.80 +0.4
299,131 - B158DRAFT_0295 0.83 +0.9
299,164 + B158DRAFT_0295 0.85 +0.3
299,186 - B158DRAFT_0295 0.86 +0.6
299,191 + B158DRAFT_0295 0.86 -0.1
299,199 - B158DRAFT_0295 0.87 +0.2
299,199 - B158DRAFT_0295 0.87 +0.5
299,199 - B158DRAFT_0295 0.87 -0.1
299,233 - B158DRAFT_0295 0.89 -0.7
299,237 + B158DRAFT_0295 0.89 -0.1
299,238 + B158DRAFT_0295 0.89 +0.2
299,238 + B158DRAFT_0295 0.89 +0.7
299,238 + B158DRAFT_0295 0.89 +0.2
299,238 + B158DRAFT_0295 0.89 +0.3
299,246 - B158DRAFT_0295 0.89 +0.5
299,246 - B158DRAFT_0295 0.89 +0.7
299,246 - B158DRAFT_0295 0.89 +0.9
299,248 + B158DRAFT_0295 0.89 +0.6
299,250 + B158DRAFT_0295 0.90 +0.3
299,250 + B158DRAFT_0295 0.90 -0.4
299,254 - B158DRAFT_0295 0.90 +0.9
299,256 - B158DRAFT_0295 0.90 +0.4
299,256 - B158DRAFT_0295 0.90 +0.9
299,256 - B158DRAFT_0295 0.90 +0.4
299,262 + +0.0
299,316 + +0.6
299,358 - +1.1
299,359 - +0.2
299,366 - +1.4
299,462 + +0.1
299,523 + +0.1
299,528 + +0.3
299,528 + +0.2
299,561 - +0.5
299,630 + +0.9
299,711 - +0.1
299,711 - +0.3
299,756 + -0.2
299,759 + -0.1
299,845 + -0.5
299,878 - -0.9
299,878 - -0.3
299,878 - -0.3
299,882 + +0.1
299,882 + +0.1
299,941 - B158DRAFT_0296 0.22 -0.1
299,965 + B158DRAFT_0296 0.27 -0.9
299,978 + B158DRAFT_0296 0.30 -0.4
299,986 - B158DRAFT_0296 0.31 -0.4
299,986 - B158DRAFT_0296 0.31 -0.2
299,986 - B158DRAFT_0296 0.31 -0.8
299,991 - B158DRAFT_0296 0.32 -0.4
300,064 - B158DRAFT_0296 0.48 -0.6
300,105 - B158DRAFT_0296 0.57 -0.8
300,185 + B158DRAFT_0296 0.74 +0.5
300,185 + B158DRAFT_0296 0.74 +0.3
300,188 - B158DRAFT_0296 0.75 +0.0
300,190 + B158DRAFT_0296 0.75 -0.1
300,190 + B158DRAFT_0296 0.75 -0.1
300,190 + B158DRAFT_0296 0.75 +0.9
300,195 + B158DRAFT_0296 0.76 +0.0
300,198 - B158DRAFT_0296 0.77 -0.5
300,209 + B158DRAFT_0296 0.79 -0.4
300,250 + B158DRAFT_0296 0.88 -0.2
300,250 + B158DRAFT_0296 0.88 -0.1
300,253 - B158DRAFT_0296 0.89 -0.9
300,263 - -0.4
300,263 - -0.2
300,265 + +0.0

Or see this region's nucleotide sequence