Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0261

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0259 and B158DRAFT_0260 are separated by 26 nucleotidesB158DRAFT_0260 and B158DRAFT_0261 are separated by 58 nucleotidesB158DRAFT_0261 and B158DRAFT_0262 are separated by 363 nucleotides B158DRAFT_0259: B158DRAFT_0259 - shikimate 5-dehydrogenase, at 264,608 to 265,402 _0259 B158DRAFT_0260: B158DRAFT_0260 - Putative protein-S-isoprenylcysteine methyltransferase, at 265,429 to 265,890 _0260 B158DRAFT_0261: B158DRAFT_0261 - catalase/peroxidase HPI, at 265,949 to 268,180 _0261 B158DRAFT_0262: B158DRAFT_0262 - hypothetical protein, at 268,544 to 269,149 _0262 Position (kb) 265 266 267 268 269Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 264.956 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.017 kb on + strand, within B158DRAFT_0259at 265.034 kb on + strand, within B158DRAFT_0259at 265.056 kb on + strand, within B158DRAFT_0259at 265.056 kb on + strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.080 kb on - strand, within B158DRAFT_0259at 265.291 kb on + strand, within B158DRAFT_0259at 265.299 kb on - strand, within B158DRAFT_0259at 265.316 kb on + strand, within B158DRAFT_0259at 265.350 kb on + strandat 265.351 kb on - strandat 265.358 kb on - strandat 265.493 kb on + strand, within B158DRAFT_0260at 265.501 kb on - strand, within B158DRAFT_0260at 265.521 kb on + strand, within B158DRAFT_0260at 265.576 kb on - strand, within B158DRAFT_0260at 265.623 kb on - strand, within B158DRAFT_0260at 265.832 kb on - strand, within B158DRAFT_0260at 265.839 kb on + strand, within B158DRAFT_0260at 266.044 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.129 kb on + strandat 266.136 kb on + strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.137 kb on - strandat 266.144 kb on - strandat 266.213 kb on + strand, within B158DRAFT_0261at 266.221 kb on - strand, within B158DRAFT_0261at 266.228 kb on - strand, within B158DRAFT_0261at 266.228 kb on - strand, within B158DRAFT_0261at 266.228 kb on - strand, within B158DRAFT_0261at 266.248 kb on + strand, within B158DRAFT_0261at 266.256 kb on - strand, within B158DRAFT_0261at 266.264 kb on + strand, within B158DRAFT_0261at 266.264 kb on + strand, within B158DRAFT_0261at 266.269 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.320 kb on + strand, within B158DRAFT_0261at 266.328 kb on + strand, within B158DRAFT_0261at 266.328 kb on - strand, within B158DRAFT_0261at 266.328 kb on - strand, within B158DRAFT_0261at 266.328 kb on - strand, within B158DRAFT_0261at 266.328 kb on - strand, within B158DRAFT_0261at 266.328 kb on - strand, within B158DRAFT_0261at 266.351 kb on - strand, within B158DRAFT_0261at 266.351 kb on - strand, within B158DRAFT_0261at 266.351 kb on - strand, within B158DRAFT_0261at 266.403 kb on + strand, within B158DRAFT_0261at 266.410 kb on + strand, within B158DRAFT_0261at 266.477 kb on - strand, within B158DRAFT_0261at 266.477 kb on - strand, within B158DRAFT_0261at 266.482 kb on - strand, within B158DRAFT_0261at 266.574 kb on + strand, within B158DRAFT_0261at 266.576 kb on + strand, within B158DRAFT_0261at 266.618 kb on + strand, within B158DRAFT_0261at 266.685 kb on - strand, within B158DRAFT_0261at 266.767 kb on - strand, within B158DRAFT_0261at 266.861 kb on + strand, within B158DRAFT_0261at 266.928 kb on + strand, within B158DRAFT_0261at 266.936 kb on - strand, within B158DRAFT_0261at 266.936 kb on - strand, within B158DRAFT_0261at 266.985 kb on - strand, within B158DRAFT_0261at 267.028 kb on + strand, within B158DRAFT_0261at 267.071 kb on - strand, within B158DRAFT_0261at 267.071 kb on - strand, within B158DRAFT_0261at 267.071 kb on - strand, within B158DRAFT_0261at 267.121 kb on + strand, within B158DRAFT_0261at 267.121 kb on + strand, within B158DRAFT_0261at 267.129 kb on - strand, within B158DRAFT_0261at 267.143 kb on + strand, within B158DRAFT_0261at 267.151 kb on - strand, within B158DRAFT_0261at 267.179 kb on + strand, within B158DRAFT_0261at 267.179 kb on + strand, within B158DRAFT_0261at 267.187 kb on - strand, within B158DRAFT_0261at 267.187 kb on - strand, within B158DRAFT_0261at 267.187 kb on - strand, within B158DRAFT_0261at 267.219 kb on + strand, within B158DRAFT_0261at 267.219 kb on + strand, within B158DRAFT_0261at 267.227 kb on - strand, within B158DRAFT_0261at 267.262 kb on - strand, within B158DRAFT_0261at 267.313 kb on + strand, within B158DRAFT_0261at 267.318 kb on + strand, within B158DRAFT_0261at 267.329 kb on + strand, within B158DRAFT_0261at 267.329 kb on - strand, within B158DRAFT_0261at 267.331 kb on + strand, within B158DRAFT_0261at 267.331 kb on + strand, within B158DRAFT_0261at 267.331 kb on + strand, within B158DRAFT_0261at 267.336 kb on + strand, within B158DRAFT_0261at 267.339 kb on - strand, within B158DRAFT_0261at 267.339 kb on - strand, within B158DRAFT_0261at 267.339 kb on - strand, within B158DRAFT_0261at 267.348 kb on - strand, within B158DRAFT_0261at 267.388 kb on - strand, within B158DRAFT_0261at 267.412 kb on + strand, within B158DRAFT_0261at 267.462 kb on + strand, within B158DRAFT_0261at 267.462 kb on + strand, within B158DRAFT_0261at 267.470 kb on - strand, within B158DRAFT_0261at 267.477 kb on - strand, within B158DRAFT_0261at 267.502 kb on - strand, within B158DRAFT_0261at 267.502 kb on - strand, within B158DRAFT_0261at 267.502 kb on - strand, within B158DRAFT_0261at 267.503 kb on + strand, within B158DRAFT_0261at 267.511 kb on - strand, within B158DRAFT_0261at 267.530 kb on - strand, within B158DRAFT_0261at 267.543 kb on + strand, within B158DRAFT_0261at 267.554 kb on + strand, within B158DRAFT_0261at 267.683 kb on + strand, within B158DRAFT_0261at 267.691 kb on - strand, within B158DRAFT_0261at 267.691 kb on - strand, within B158DRAFT_0261at 267.703 kb on + strand, within B158DRAFT_0261at 267.711 kb on - strand, within B158DRAFT_0261at 267.729 kb on + strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.756 kb on + strand, within B158DRAFT_0261at 267.785 kb on - strand, within B158DRAFT_0261at 267.787 kb on + strand, within B158DRAFT_0261at 267.797 kb on + strand, within B158DRAFT_0261at 267.802 kb on + strand, within B158DRAFT_0261at 267.854 kb on + strand, within B158DRAFT_0261at 267.854 kb on + strand, within B158DRAFT_0261at 267.900 kb on + strand, within B158DRAFT_0261at 267.924 kb on - strand, within B158DRAFT_0261at 267.924 kb on - strand, within B158DRAFT_0261at 267.987 kb on - strandat 267.988 kb on + strandat 267.988 kb on + strandat 267.997 kb on - strandat 268.020 kb on + strandat 268.028 kb on - strandat 268.028 kb on - strandat 268.038 kb on + strandat 268.088 kb on + strandat 268.135 kb on + strandat 268.331 kb on + strandat 268.331 kb on + strandat 268.331 kb on + strandat 268.339 kb on - strandat 268.358 kb on + strandat 268.358 kb on + strandat 268.364 kb on + strandat 268.371 kb on - strandat 268.456 kb on + strandat 268.466 kb on + strandat 268.469 kb on - strandat 268.469 kb on - strandat 268.474 kb on - strandat 268.474 kb on - strandat 268.507 kb on + strandat 268.536 kb on - strandat 268.614 kb on + strand, within B158DRAFT_0262at 268.615 kb on - strand, within B158DRAFT_0262at 268.615 kb on - strand, within B158DRAFT_0262at 268.622 kb on - strand, within B158DRAFT_0262at 268.632 kb on - strand, within B158DRAFT_0262at 268.646 kb on + strand, within B158DRAFT_0262at 268.646 kb on + strand, within B158DRAFT_0262at 268.679 kb on + strand, within B158DRAFT_0262at 268.705 kb on + strand, within B158DRAFT_0262at 268.710 kb on + strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.804 kb on - strand, within B158DRAFT_0262at 268.829 kb on + strand, within B158DRAFT_0262at 268.887 kb on + strand, within B158DRAFT_0262at 268.887 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 269.017 kb on + strand, within B158DRAFT_0262at 269.022 kb on + strand, within B158DRAFT_0262at 269.030 kb on - strand, within B158DRAFT_0262at 269.030 kb on - strand, within B158DRAFT_0262at 269.035 kb on - strand, within B158DRAFT_0262

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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264,956 + B158DRAFT_0259 0.44 -1.2
264,998 + B158DRAFT_0259 0.49 -1.3
264,998 + B158DRAFT_0259 0.49 -2.8
264,998 + B158DRAFT_0259 0.49 -2.1
264,998 + B158DRAFT_0259 0.49 -2.9
264,998 + B158DRAFT_0259 0.49 -1.6
264,998 + B158DRAFT_0259 0.49 -1.6
264,998 + B158DRAFT_0259 0.49 -1.4
264,998 + B158DRAFT_0259 0.49 -3.3
265,006 - B158DRAFT_0259 0.50 -2.6
265,006 - B158DRAFT_0259 0.50 -2.1
265,006 - B158DRAFT_0259 0.50 -2.2
265,006 - B158DRAFT_0259 0.50 -2.9
265,017 + B158DRAFT_0259 0.51 -2.2
265,034 + B158DRAFT_0259 0.54 -2.2
265,056 + B158DRAFT_0259 0.56 -1.9
265,056 + B158DRAFT_0259 0.56 -1.9
265,064 - B158DRAFT_0259 0.57 -1.4
265,064 - B158DRAFT_0259 0.57 -0.7
265,064 - B158DRAFT_0259 0.57 -1.8
265,064 - B158DRAFT_0259 0.57 -1.4
265,080 - B158DRAFT_0259 0.59 -2.7
265,291 + B158DRAFT_0259 0.86 -3.3
265,299 - B158DRAFT_0259 0.87 -2.7
265,316 + B158DRAFT_0259 0.89 -1.9
265,350 + -0.7
265,351 - -1.4
265,358 - -2.3
265,493 + B158DRAFT_0260 0.14 -1.0
265,501 - B158DRAFT_0260 0.16 -0.8
265,521 + B158DRAFT_0260 0.20 -2.0
265,576 - B158DRAFT_0260 0.32 -0.2
265,623 - B158DRAFT_0260 0.42 +0.2
265,832 - B158DRAFT_0260 0.87 +0.0
265,839 + B158DRAFT_0260 0.89 -0.0
266,044 + +0.2
266,129 + -0.4
266,129 + -0.4
266,129 + +0.3
266,129 + -1.4
266,129 + -1.4
266,129 + -0.1
266,129 + -0.3
266,129 + -0.2
266,129 + -0.1
266,129 + -0.2
266,136 + +0.3
266,137 - -0.4
266,137 - -0.2
266,137 - -0.4
266,137 - +0.1
266,137 - +1.0
266,137 - +0.3
266,137 - -0.8
266,137 - +0.1
266,137 - +0.3
266,137 - -0.2
266,137 - -0.3
266,144 - +0.1
266,213 + B158DRAFT_0261 0.12 +0.2
266,221 - B158DRAFT_0261 0.12 -0.5
266,228 - B158DRAFT_0261 0.12 +0.1
266,228 - B158DRAFT_0261 0.12 -0.4
266,228 - B158DRAFT_0261 0.12 +0.6
266,248 + B158DRAFT_0261 0.13 -0.2
266,256 - B158DRAFT_0261 0.14 -0.5
266,264 + B158DRAFT_0261 0.14 -0.2
266,264 + B158DRAFT_0261 0.14 -0.3
266,269 + B158DRAFT_0261 0.14 -0.3
266,320 + B158DRAFT_0261 0.17 -1.2
266,320 + B158DRAFT_0261 0.17 +0.5
266,320 + B158DRAFT_0261 0.17 -0.1
266,320 + B158DRAFT_0261 0.17 -0.7
266,320 + B158DRAFT_0261 0.17 -0.1
266,320 + B158DRAFT_0261 0.17 +0.1
266,320 + B158DRAFT_0261 0.17 -0.4
266,320 + B158DRAFT_0261 0.17 +0.4
266,328 + B158DRAFT_0261 0.17 +0.3
266,328 - B158DRAFT_0261 0.17 -0.4
266,328 - B158DRAFT_0261 0.17 -0.4
266,328 - B158DRAFT_0261 0.17 -0.3
266,328 - B158DRAFT_0261 0.17 -0.0
266,328 - B158DRAFT_0261 0.17 +0.2
266,351 - B158DRAFT_0261 0.18 +0.0
266,351 - B158DRAFT_0261 0.18 +0.3
266,351 - B158DRAFT_0261 0.18 -0.8
266,403 + B158DRAFT_0261 0.20 -0.4
266,410 + B158DRAFT_0261 0.21 -0.1
266,477 - B158DRAFT_0261 0.24 +0.4
266,477 - B158DRAFT_0261 0.24 -0.0
266,482 - B158DRAFT_0261 0.24 -0.1
266,574 + B158DRAFT_0261 0.28 +0.1
266,576 + B158DRAFT_0261 0.28 -0.5
266,618 + B158DRAFT_0261 0.30 -0.2
266,685 - B158DRAFT_0261 0.33 +0.2
266,767 - B158DRAFT_0261 0.37 +0.4
266,861 + B158DRAFT_0261 0.41 +1.9
266,928 + B158DRAFT_0261 0.44 +0.2
266,936 - B158DRAFT_0261 0.44 -0.9
266,936 - B158DRAFT_0261 0.44 -0.0
266,985 - B158DRAFT_0261 0.46 +0.3
267,028 + B158DRAFT_0261 0.48 +0.6
267,071 - B158DRAFT_0261 0.50 -0.4
267,071 - B158DRAFT_0261 0.50 +0.2
267,071 - B158DRAFT_0261 0.50 -0.1
267,121 + B158DRAFT_0261 0.53 -0.0
267,121 + B158DRAFT_0261 0.53 +0.2
267,129 - B158DRAFT_0261 0.53 -0.8
267,143 + B158DRAFT_0261 0.53 -0.3
267,151 - B158DRAFT_0261 0.54 -0.4
267,179 + B158DRAFT_0261 0.55 -0.4
267,179 + B158DRAFT_0261 0.55 -0.5
267,187 - B158DRAFT_0261 0.55 +0.3
267,187 - B158DRAFT_0261 0.55 -0.3
267,187 - B158DRAFT_0261 0.55 -0.7
267,219 + B158DRAFT_0261 0.57 -1.0
267,219 + B158DRAFT_0261 0.57 -0.3
267,227 - B158DRAFT_0261 0.57 -0.3
267,262 - B158DRAFT_0261 0.59 +0.1
267,313 + B158DRAFT_0261 0.61 +0.3
267,318 + B158DRAFT_0261 0.61 -1.0
267,329 + B158DRAFT_0261 0.62 -0.4
267,329 - B158DRAFT_0261 0.62 +0.2
267,331 + B158DRAFT_0261 0.62 +0.9
267,331 + B158DRAFT_0261 0.62 +0.0
267,331 + B158DRAFT_0261 0.62 +0.2
267,336 + B158DRAFT_0261 0.62 +0.1
267,339 - B158DRAFT_0261 0.62 +0.3
267,339 - B158DRAFT_0261 0.62 -0.5
267,339 - B158DRAFT_0261 0.62 +0.2
267,348 - B158DRAFT_0261 0.63 +0.1
267,388 - B158DRAFT_0261 0.64 +0.3
267,412 + B158DRAFT_0261 0.66 +0.1
267,462 + B158DRAFT_0261 0.68 +0.2
267,462 + B158DRAFT_0261 0.68 -0.8
267,470 - B158DRAFT_0261 0.68 -0.7
267,477 - B158DRAFT_0261 0.68 +0.0
267,502 - B158DRAFT_0261 0.70 -0.7
267,502 - B158DRAFT_0261 0.70 -0.5
267,502 - B158DRAFT_0261 0.70 -0.5
267,503 + B158DRAFT_0261 0.70 -0.5
267,511 - B158DRAFT_0261 0.70 -0.2
267,530 - B158DRAFT_0261 0.71 -0.1
267,543 + B158DRAFT_0261 0.71 +0.1
267,554 + B158DRAFT_0261 0.72 +0.2
267,683 + B158DRAFT_0261 0.78 -0.1
267,691 - B158DRAFT_0261 0.78 -0.0
267,691 - B158DRAFT_0261 0.78 -0.2
267,703 + B158DRAFT_0261 0.79 -0.3
267,711 - B158DRAFT_0261 0.79 +1.6
267,729 + B158DRAFT_0261 0.80 +0.3
267,737 - B158DRAFT_0261 0.80 -0.4
267,737 - B158DRAFT_0261 0.80 -0.4
267,737 - B158DRAFT_0261 0.80 +0.1
267,737 - B158DRAFT_0261 0.80 -0.7
267,756 + B158DRAFT_0261 0.81 +0.0
267,785 - B158DRAFT_0261 0.82 +0.0
267,787 + B158DRAFT_0261 0.82 +0.1
267,797 + B158DRAFT_0261 0.83 -0.2
267,802 + B158DRAFT_0261 0.83 -0.1
267,854 + B158DRAFT_0261 0.85 -0.2
267,854 + B158DRAFT_0261 0.85 +0.5
267,900 + B158DRAFT_0261 0.87 -0.4
267,924 - B158DRAFT_0261 0.88 -1.1
267,924 - B158DRAFT_0261 0.88 +0.1
267,987 - +0.0
267,988 + -0.6
267,988 + -0.3
267,997 - +0.4
268,020 + +0.2
268,028 - +0.1
268,028 - +0.0
268,038 + -0.0
268,088 + -0.1
268,135 + -0.3
268,331 + -0.1
268,331 + +0.2
268,331 + -0.5
268,339 - -0.4
268,358 + +0.0
268,358 + -0.6
268,364 + -0.0
268,371 - +0.5
268,456 + +0.0
268,466 + +0.1
268,469 - -0.9
268,469 - -0.4
268,474 - +0.0
268,474 - +0.1
268,507 + -1.3
268,536 - -0.7
268,614 + B158DRAFT_0262 0.12 -0.1
268,615 - B158DRAFT_0262 0.12 -1.2
268,615 - B158DRAFT_0262 0.12 -0.3
268,622 - B158DRAFT_0262 0.13 +0.1
268,632 - B158DRAFT_0262 0.15 -0.7
268,646 + B158DRAFT_0262 0.17 +0.2
268,646 + B158DRAFT_0262 0.17 +0.1
268,679 + B158DRAFT_0262 0.22 -0.3
268,705 + B158DRAFT_0262 0.27 +0.2
268,710 + B158DRAFT_0262 0.27 -0.8
268,713 - B158DRAFT_0262 0.28 +0.3
268,713 - B158DRAFT_0262 0.28 +0.1
268,713 - B158DRAFT_0262 0.28 -0.9
268,713 - B158DRAFT_0262 0.28 -0.1
268,713 - B158DRAFT_0262 0.28 +0.2
268,713 - B158DRAFT_0262 0.28 +0.2
268,804 - B158DRAFT_0262 0.43 +0.6
268,829 + B158DRAFT_0262 0.47 -0.9
268,887 + B158DRAFT_0262 0.57 -0.2
268,887 + B158DRAFT_0262 0.57 -0.2
268,918 + B158DRAFT_0262 0.62 -0.0
268,918 + B158DRAFT_0262 0.62 -0.9
268,918 + B158DRAFT_0262 0.62 +0.0
268,926 - B158DRAFT_0262 0.63 +0.1
268,926 - B158DRAFT_0262 0.63 -0.1
268,926 - B158DRAFT_0262 0.63 -0.3
269,017 + B158DRAFT_0262 0.78 -0.6
269,022 + B158DRAFT_0262 0.79 -0.0
269,030 - B158DRAFT_0262 0.80 +0.1
269,030 - B158DRAFT_0262 0.80 +0.5
269,035 - B158DRAFT_0262 0.81 +0.3

Or see this region's nucleotide sequence