Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2463 and B158DRAFT_2464 are separated by 16 nucleotides B158DRAFT_2464 and B158DRAFT_2465 are separated by 140 nucleotides B158DRAFT_2465 and B158DRAFT_2466 are separated by 72 nucleotides
B158DRAFT_2463: B158DRAFT_2463 - RND family efflux transporter, MFP subunit, at 641,926 to 643,587
_2463
B158DRAFT_2464: B158DRAFT_2464 - Outer membrane protein, at 643,604 to 644,959
_2464
B158DRAFT_2465: B158DRAFT_2465 - hypothetical protein, at 645,100 to 645,510
_2465
B158DRAFT_2466: B158DRAFT_2466 - methionine synthase (B12-dependent) (EC 2.1.1.13), at 645,583 to 649,266
_2466
Position (kb) 643
644
645 Strain fitness (log2 ratio) -2
-1
0
1 at 642.718 kb on + strand, within B158DRAFT_2463 at 642.777 kb on + strand, within B158DRAFT_2463 at 642.784 kb on + strand, within B158DRAFT_2463 at 642.785 kb on - strand, within B158DRAFT_2463 at 642.814 kb on - strand, within B158DRAFT_2463 at 642.815 kb on + strand, within B158DRAFT_2463 at 642.848 kb on + strand, within B158DRAFT_2463 at 642.848 kb on + strand, within B158DRAFT_2463 at 642.856 kb on - strand, within B158DRAFT_2463 at 642.856 kb on - strand, within B158DRAFT_2463 at 642.856 kb on - strand, within B158DRAFT_2463 at 642.856 kb on - strand, within B158DRAFT_2463 at 642.877 kb on + strand, within B158DRAFT_2463 at 642.877 kb on + strand, within B158DRAFT_2463 at 642.885 kb on - strand, within B158DRAFT_2463 at 642.894 kb on - strand, within B158DRAFT_2463 at 642.917 kb on + strand, within B158DRAFT_2463 at 642.948 kb on - strand, within B158DRAFT_2463 at 642.959 kb on - strand, within B158DRAFT_2463 at 643.036 kb on + strand, within B158DRAFT_2463 at 643.044 kb on - strand, within B158DRAFT_2463 at 643.044 kb on - strand, within B158DRAFT_2463 at 643.044 kb on - strand, within B158DRAFT_2463 at 643.044 kb on - strand, within B158DRAFT_2463 at 643.046 kb on + strand, within B158DRAFT_2463 at 643.046 kb on + strand, within B158DRAFT_2463 at 643.046 kb on + strand, within B158DRAFT_2463 at 643.046 kb on + strand, within B158DRAFT_2463 at 643.072 kb on + strand, within B158DRAFT_2463 at 643.166 kb on - strand, within B158DRAFT_2463 at 643.200 kb on - strand, within B158DRAFT_2463 at 643.289 kb on + strand, within B158DRAFT_2463 at 643.328 kb on + strand, within B158DRAFT_2463 at 643.336 kb on + strand, within B158DRAFT_2463 at 643.357 kb on + strand, within B158DRAFT_2463 at 643.365 kb on - strand, within B158DRAFT_2463 at 643.394 kb on + strand, within B158DRAFT_2463 at 643.437 kb on + strand at 643.438 kb on + strand at 643.448 kb on + strand at 643.448 kb on + strand at 643.448 kb on + strand at 643.456 kb on - strand at 643.738 kb on + strand at 643.862 kb on + strand, within B158DRAFT_2464 at 643.870 kb on - strand, within B158DRAFT_2464 at 643.872 kb on + strand, within B158DRAFT_2464 at 643.923 kb on - strand, within B158DRAFT_2464 at 644.072 kb on + strand, within B158DRAFT_2464 at 644.073 kb on - strand, within B158DRAFT_2464 at 644.381 kb on - strand, within B158DRAFT_2464 at 644.419 kb on + strand, within B158DRAFT_2464 at 644.465 kb on - strand, within B158DRAFT_2464 at 644.476 kb on + strand, within B158DRAFT_2464 at 644.491 kb on - strand, within B158DRAFT_2464 at 644.491 kb on - strand, within B158DRAFT_2464 at 644.578 kb on - strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.625 kb on + strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.633 kb on - strand, within B158DRAFT_2464 at 644.643 kb on - strand, within B158DRAFT_2464 at 644.677 kb on + strand, within B158DRAFT_2464 at 644.735 kb on + strand, within B158DRAFT_2464 at 644.751 kb on - strand, within B158DRAFT_2464 at 644.762 kb on + strand, within B158DRAFT_2464 at 644.853 kb on - strand at 644.853 kb on - strand at 644.883 kb on - strand at 645.031 kb on - strand at 645.070 kb on + strand at 645.070 kb on + strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.078 kb on - strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.087 kb on + strand at 645.095 kb on - strand at 645.095 kb on - strand at 645.099 kb on + strand at 645.128 kb on + strand at 645.148 kb on + strand, within B158DRAFT_2465 at 645.209 kb on + strand, within B158DRAFT_2465 at 645.223 kb on + strand, within B158DRAFT_2465 at 645.231 kb on - strand, within B158DRAFT_2465 at 645.272 kb on - strand, within B158DRAFT_2465 at 645.324 kb on - strand, within B158DRAFT_2465 at 645.328 kb on + strand, within B158DRAFT_2465 at 645.328 kb on + strand, within B158DRAFT_2465 at 645.338 kb on + strand, within B158DRAFT_2465 at 645.343 kb on + strand, within B158DRAFT_2465 at 645.346 kb on - strand, within B158DRAFT_2465 at 645.350 kb on - strand, within B158DRAFT_2465 at 645.393 kb on + strand, within B158DRAFT_2465 at 645.393 kb on + strand, within B158DRAFT_2465 at 645.408 kb on + strand, within B158DRAFT_2465 at 645.457 kb on + strand, within B158DRAFT_2465 at 645.465 kb on - strand, within B158DRAFT_2465 at 645.470 kb on - strand at 645.490 kb on + strand at 645.506 kb on - strand at 645.539 kb on - strand at 645.600 kb on + strand at 645.603 kb on - strand at 645.606 kb on + strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.608 kb on - strand at 645.626 kb on + strand at 645.634 kb on + strand at 645.634 kb on + strand at 645.641 kb on + strand at 645.641 kb on + strand at 645.649 kb on - strand at 645.649 kb on - strand at 645.649 kb on - strand at 645.659 kb on - strand at 645.659 kb on - strand at 645.688 kb on - strand at 645.727 kb on + strand at 645.740 kb on + strand at 645.743 kb on + strand at 645.767 kb on + strand at 645.779 kb on + strand at 645.813 kb on - strand at 645.813 kb on - strand at 645.815 kb on + strand at 645.823 kb on - strand at 645.825 kb on + strand at 645.849 kb on - strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.850 kb on + strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.858 kb on - strand at 645.860 kb on + strand at 645.860 kb on + strand at 645.896 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 642,718 + B158DRAFT_2463 0.48 +1.1 642,777 + B158DRAFT_2463 0.51 -0.8 642,784 + B158DRAFT_2463 0.52 +0.5 642,785 - B158DRAFT_2463 0.52 -0.4 642,814 - B158DRAFT_2463 0.53 -1.1 642,815 + B158DRAFT_2463 0.53 +0.2 642,848 + B158DRAFT_2463 0.55 +0.3 642,848 + B158DRAFT_2463 0.55 -0.1 642,856 - B158DRAFT_2463 0.56 +0.4 642,856 - B158DRAFT_2463 0.56 -0.2 642,856 - B158DRAFT_2463 0.56 -0.3 642,856 - B158DRAFT_2463 0.56 -0.0 642,877 + B158DRAFT_2463 0.57 +0.0 642,877 + B158DRAFT_2463 0.57 -0.0 642,885 - B158DRAFT_2463 0.58 -0.3 642,894 - B158DRAFT_2463 0.58 -0.3 642,917 + B158DRAFT_2463 0.60 +0.7 642,948 - B158DRAFT_2463 0.61 +0.3 642,959 - B158DRAFT_2463 0.62 +0.5 643,036 + B158DRAFT_2463 0.67 +1.1 643,044 - B158DRAFT_2463 0.67 -0.5 643,044 - B158DRAFT_2463 0.67 -0.6 643,044 - B158DRAFT_2463 0.67 +0.3 643,044 - B158DRAFT_2463 0.67 -0.8 643,046 + B158DRAFT_2463 0.67 -0.6 643,046 + B158DRAFT_2463 0.67 -0.3 643,046 + B158DRAFT_2463 0.67 -0.2 643,046 + B158DRAFT_2463 0.67 -1.5 643,072 + B158DRAFT_2463 0.69 -0.0 643,166 - B158DRAFT_2463 0.75 -0.1 643,200 - B158DRAFT_2463 0.77 +1.3 643,289 + B158DRAFT_2463 0.82 -0.0 643,328 + B158DRAFT_2463 0.84 +0.4 643,336 + B158DRAFT_2463 0.85 -0.2 643,357 + B158DRAFT_2463 0.86 -0.3 643,365 - B158DRAFT_2463 0.87 -0.2 643,394 + B158DRAFT_2463 0.88 -1.4 643,437 + -1.0 643,438 + +0.7 643,448 + -0.3 643,448 + +0.3 643,448 + +0.4 643,456 - -0.0 643,738 + -0.3 643,862 + B158DRAFT_2464 0.19 -0.2 643,870 - B158DRAFT_2464 0.20 +0.4 643,872 + B158DRAFT_2464 0.20 -0.0 643,923 - B158DRAFT_2464 0.24 -0.8 644,072 + B158DRAFT_2464 0.35 -0.3 644,073 - B158DRAFT_2464 0.35 -1.7 644,381 - B158DRAFT_2464 0.57 -0.0 644,419 + B158DRAFT_2464 0.60 -0.6 644,465 - B158DRAFT_2464 0.63 +0.1 644,476 + B158DRAFT_2464 0.64 +0.0 644,491 - B158DRAFT_2464 0.65 -0.4 644,491 - B158DRAFT_2464 0.65 +0.5 644,578 - B158DRAFT_2464 0.72 +1.2 644,625 + B158DRAFT_2464 0.75 -1.0 644,625 + B158DRAFT_2464 0.75 +0.8 644,625 + B158DRAFT_2464 0.75 +0.0 644,633 - B158DRAFT_2464 0.76 +0.1 644,633 - B158DRAFT_2464 0.76 -0.0 644,633 - B158DRAFT_2464 0.76 +0.1 644,643 - B158DRAFT_2464 0.77 -0.4 644,677 + B158DRAFT_2464 0.79 -0.2 644,735 + B158DRAFT_2464 0.83 -0.1 644,751 - B158DRAFT_2464 0.85 +0.3 644,762 + B158DRAFT_2464 0.85 -0.0 644,853 - -0.8 644,853 - -0.0 644,883 - -0.7 645,031 - +0.1 645,070 + -0.5 645,070 + -0.4 645,078 - -0.2 645,078 - -0.6 645,078 - -0.0 645,078 - -0.2 645,087 + +0.1 645,087 + -1.6 645,087 + +0.5 645,087 + +0.2 645,095 - -0.7 645,095 - +0.3 645,099 + -0.2 645,128 + -0.0 645,148 + B158DRAFT_2465 0.12 -0.2 645,209 + B158DRAFT_2465 0.27 +0.7 645,223 + B158DRAFT_2465 0.30 -0.3 645,231 - B158DRAFT_2465 0.32 -0.5 645,272 - B158DRAFT_2465 0.42 +0.3 645,324 - B158DRAFT_2465 0.55 -0.2 645,328 + B158DRAFT_2465 0.55 -1.6 645,328 + B158DRAFT_2465 0.55 +0.1 645,338 + B158DRAFT_2465 0.58 -0.3 645,343 + B158DRAFT_2465 0.59 +0.0 645,346 - B158DRAFT_2465 0.60 -0.8 645,350 - B158DRAFT_2465 0.61 -0.4 645,393 + B158DRAFT_2465 0.71 -0.1 645,393 + B158DRAFT_2465 0.71 -1.8 645,408 + B158DRAFT_2465 0.75 +0.4 645,457 + B158DRAFT_2465 0.87 +0.2 645,465 - B158DRAFT_2465 0.89 -0.6 645,470 - -1.6 645,490 + +0.2 645,506 - +0.3 645,539 - +0.0 645,600 + -0.3 645,603 - -0.0 645,606 + -0.4 645,608 - -0.4 645,608 - -0.0 645,608 - +0.1 645,608 - +0.1 645,608 - -0.2 645,626 + -0.3 645,634 + +0.2 645,634 + +0.3 645,641 + -0.1 645,641 + -0.1 645,649 - -0.3 645,649 - +0.7 645,649 - +0.1 645,659 - -0.2 645,659 - -0.2 645,688 - +0.4 645,727 + -0.7 645,740 + +0.3 645,743 + -1.0 645,767 + -0.4 645,779 + -0.5 645,813 - -0.5 645,813 - -0.1 645,815 + -0.4 645,823 - +0.3 645,825 + -0.8 645,849 - -2.2 645,850 + +0.3 645,850 + -0.4 645,850 + +1.0 645,850 + -0.3 645,858 - +0.2 645,858 - -0.6 645,858 - +0.1 645,858 - -1.9 645,860 + -0.5 645,860 + +0.1 645,896 + -0.4
Or see this region's nucleotide sequence