Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2101 and B158DRAFT_2102 overlap by 4 nucleotides B158DRAFT_2102 and B158DRAFT_2103 are separated by 64 nucleotides B158DRAFT_2103 and B158DRAFT_2104 overlap by 1 nucleotides B158DRAFT_2104 and B158DRAFT_2105 are separated by 87 nucleotides
B158DRAFT_2101: B158DRAFT_2101 - Cytochrome b subunit of the bc complex, at 235,581 to 236,792
_2101
B158DRAFT_2102: B158DRAFT_2102 - Cytochrome c1, at 236,789 to 237,631
_2102
B158DRAFT_2103: B158DRAFT_2103 - Glutathione S-transferase, at 237,696 to 238,328
_2103
B158DRAFT_2104: B158DRAFT_2104 - Stringent starvation protein B, at 238,328 to 238,780
_2104
B158DRAFT_2105: B158DRAFT_2105 - Predicted periplasmic or secreted lipoprotein, at 238,868 to 239,395
_2105
Position (kb) 237
238
239 Strain fitness (log2 ratio) -2
-1
0
1 at 236.766 kb on + strand at 236.774 kb on + strand at 236.776 kb on + strand at 236.984 kb on + strand, within B158DRAFT_2102 at 237.646 kb on - strand at 237.684 kb on + strand at 237.692 kb on - strand at 237.859 kb on + strand, within B158DRAFT_2103 at 237.864 kb on + strand, within B158DRAFT_2103 at 238.014 kb on + strand, within B158DRAFT_2103 at 238.141 kb on - strand, within B158DRAFT_2103 at 238.261 kb on - strand, within B158DRAFT_2103 at 238.401 kb on - strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.403 kb on + strand, within B158DRAFT_2104 at 238.411 kb on - strand, within B158DRAFT_2104 at 238.411 kb on - strand, within B158DRAFT_2104 at 238.411 kb on - strand, within B158DRAFT_2104 at 238.411 kb on - strand, within B158DRAFT_2104 at 238.411 kb on - strand, within B158DRAFT_2104 at 238.582 kb on - strand, within B158DRAFT_2104 at 238.830 kb on + strand at 238.830 kb on + strand at 238.830 kb on + strand at 238.838 kb on - strand at 238.930 kb on + strand, within B158DRAFT_2105 at 238.943 kb on - strand, within B158DRAFT_2105 at 238.943 kb on - strand, within B158DRAFT_2105 at 238.943 kb on - strand, within B158DRAFT_2105 at 239.079 kb on + strand, within B158DRAFT_2105 at 239.087 kb on - strand, within B158DRAFT_2105 at 239.087 kb on - strand, within B158DRAFT_2105 at 239.150 kb on - strand, within B158DRAFT_2105 at 239.293 kb on - strand, within B158DRAFT_2105 at 239.300 kb on + strand, within B158DRAFT_2105 at 239.300 kb on + strand, within B158DRAFT_2105
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 236,766 + -1.3 236,774 + -0.9 236,776 + -0.5 236,984 + B158DRAFT_2102 0.23 -0.9 237,646 - -1.5 237,684 + -2.1 237,692 - -2.5 237,859 + B158DRAFT_2103 0.26 +0.2 237,864 + B158DRAFT_2103 0.27 -0.9 238,014 + B158DRAFT_2103 0.50 -1.5 238,141 - B158DRAFT_2103 0.70 -2.2 238,261 - B158DRAFT_2103 0.89 -2.4 238,401 - B158DRAFT_2104 0.16 -0.2 238,403 + B158DRAFT_2104 0.17 -0.1 238,403 + B158DRAFT_2104 0.17 +0.4 238,403 + B158DRAFT_2104 0.17 +0.2 238,403 + B158DRAFT_2104 0.17 -0.7 238,403 + B158DRAFT_2104 0.17 -0.5 238,403 + B158DRAFT_2104 0.17 +0.6 238,411 - B158DRAFT_2104 0.18 -0.1 238,411 - B158DRAFT_2104 0.18 -0.2 238,411 - B158DRAFT_2104 0.18 -0.2 238,411 - B158DRAFT_2104 0.18 +0.2 238,411 - B158DRAFT_2104 0.18 -0.4 238,582 - B158DRAFT_2104 0.56 -1.7 238,830 + +0.1 238,830 + -0.3 238,830 + -0.3 238,838 - +0.1 238,930 + B158DRAFT_2105 0.12 -0.2 238,943 - B158DRAFT_2105 0.14 +0.0 238,943 - B158DRAFT_2105 0.14 -0.2 238,943 - B158DRAFT_2105 0.14 +0.2 239,079 + B158DRAFT_2105 0.40 -0.0 239,087 - B158DRAFT_2105 0.41 -0.6 239,087 - B158DRAFT_2105 0.41 +0.1 239,150 - B158DRAFT_2105 0.53 -1.2 239,293 - B158DRAFT_2105 0.80 -1.6 239,300 + B158DRAFT_2105 0.82 -2.1 239,300 + B158DRAFT_2105 0.82 +0.9
Or see this region's nucleotide sequence