Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1232

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1230 and B158DRAFT_1231 are separated by 56 nucleotidesB158DRAFT_1231 and B158DRAFT_1232 are separated by 250 nucleotidesB158DRAFT_1232 and B158DRAFT_1233 are separated by 325 nucleotidesB158DRAFT_1233 and B158DRAFT_1234 are separated by 89 nucleotides B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917 _1230 B158DRAFT_1231: B158DRAFT_1231 - bacterioferritin, at 1,269,974 to 1,270,453 _1231 B158DRAFT_1232: B158DRAFT_1232 - Bacterioferritin-associated ferredoxin, at 1,270,704 to 1,270,934 _1232 B158DRAFT_1233: B158DRAFT_1233 - Multimeric flavodoxin WrbA, at 1,271,260 to 1,271,826 _1233 B158DRAFT_1234: B158DRAFT_1234 - Transcriptional regulator, at 1,271,916 to 1,272,875 _1234 Position (kb) 1270 1271Strain fitness (log2 ratio) -2 -1 0 1at 1269.719 kb on - strand, within B158DRAFT_1230at 1269.719 kb on - strand, within B158DRAFT_1230at 1269.736 kb on - strand, within B158DRAFT_1230at 1269.757 kb on + strand, within B158DRAFT_1230at 1269.762 kb on + strand, within B158DRAFT_1230at 1269.762 kb on + strand, within B158DRAFT_1230at 1269.765 kb on - strand, within B158DRAFT_1230at 1269.770 kb on - strand, within B158DRAFT_1230at 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.901 kb on + strandat 1269.909 kb on - strandat 1269.909 kb on - strandat 1269.910 kb on - strandat 1269.910 kb on - strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.947 kb on - strandat 1269.947 kb on - strandat 1269.952 kb on - strandat 1269.952 kb on - strandat 1270.099 kb on + strand, within B158DRAFT_1231at 1270.099 kb on + strand, within B158DRAFT_1231at 1270.107 kb on - strand, within B158DRAFT_1231at 1270.107 kb on - strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.141 kb on - strand, within B158DRAFT_1231at 1270.143 kb on - strand, within B158DRAFT_1231at 1270.215 kb on + strand, within B158DRAFT_1231at 1270.237 kb on - strand, within B158DRAFT_1231at 1270.347 kb on - strand, within B158DRAFT_1231at 1270.414 kb on - strandat 1270.496 kb on + strandat 1270.524 kb on - strandat 1270.524 kb on - strandat 1270.711 kb on + strandat 1270.737 kb on + strand, within B158DRAFT_1232at 1270.745 kb on - strand, within B158DRAFT_1232at 1270.754 kb on - strand, within B158DRAFT_1232at 1270.763 kb on + strand, within B158DRAFT_1232at 1270.766 kb on - strand, within B158DRAFT_1232at 1270.849 kb on - strand, within B158DRAFT_1232at 1270.875 kb on + strand, within B158DRAFT_1232at 1270.875 kb on + strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.906 kb on + strand, within B158DRAFT_1232at 1270.922 kb on + strandat 1271.297 kb on + strandat 1271.297 kb on + strandat 1271.338 kb on - strand, within B158DRAFT_1233at 1271.341 kb on - strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.348 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.362 kb on + strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.390 kb on - strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.397 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.414 kb on - strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233at 1271.459 kb on - strand, within B158DRAFT_1233at 1271.483 kb on - strand, within B158DRAFT_1233at 1271.485 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.496 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on + strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.504 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.512 kb on - strand, within B158DRAFT_1233at 1271.562 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.569 kb on + strand, within B158DRAFT_1233at 1271.574 kb on + strand, within B158DRAFT_1233at 1271.577 kb on - strand, within B158DRAFT_1233at 1271.579 kb on + strand, within B158DRAFT_1233at 1271.579 kb on + strand, within B158DRAFT_1233at 1271.587 kb on - strand, within B158DRAFT_1233at 1271.594 kb on - strand, within B158DRAFT_1233at 1271.594 kb on - strand, within B158DRAFT_1233at 1271.609 kb on + strand, within B158DRAFT_1233at 1271.609 kb on + strand, within B158DRAFT_1233at 1271.617 kb on - strand, within B158DRAFT_1233at 1271.617 kb on - strand, within B158DRAFT_1233at 1271.624 kb on - strand, within B158DRAFT_1233at 1271.677 kb on - strand, within B158DRAFT_1233at 1271.677 kb on - strand, within B158DRAFT_1233at 1271.687 kb on - strand, within B158DRAFT_1233at 1271.737 kb on + strand, within B158DRAFT_1233at 1271.755 kb on + strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.763 kb on - strand, within B158DRAFT_1233at 1271.781 kb on + strandat 1271.782 kb on + strandat 1271.782 kb on + strandat 1271.782 kb on + strandat 1271.794 kb on + strandat 1271.841 kb on - strandat 1271.860 kb on + strandat 1271.865 kb on + strandat 1271.865 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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1,269,719 - B158DRAFT_1230 0.71 +0.2
1,269,719 - B158DRAFT_1230 0.71 +0.4
1,269,736 - B158DRAFT_1230 0.73 +0.6
1,269,757 + B158DRAFT_1230 0.76 -0.2
1,269,762 + B158DRAFT_1230 0.77 -0.8
1,269,762 + B158DRAFT_1230 0.77 -0.9
1,269,765 - B158DRAFT_1230 0.78 -1.1
1,269,770 - B158DRAFT_1230 0.78 -0.6
1,269,854 + +0.3
1,269,854 + +0.1
1,269,854 + -0.4
1,269,854 + +0.1
1,269,854 + -0.4
1,269,854 + -0.8
1,269,854 + -0.7
1,269,854 + -0.2
1,269,854 + -0.6
1,269,854 + +0.2
1,269,854 + -1.1
1,269,854 + -1.2
1,269,854 + +1.0
1,269,854 + +0.2
1,269,854 + -0.2
1,269,854 + -0.3
1,269,862 - -0.8
1,269,862 - +0.1
1,269,862 - -0.1
1,269,862 - +0.4
1,269,862 - +0.5
1,269,862 - -0.4
1,269,862 - -0.4
1,269,862 - +0.0
1,269,862 - +0.1
1,269,862 - -0.4
1,269,862 - +0.1
1,269,862 - -0.2
1,269,862 - -0.5
1,269,901 + -0.3
1,269,909 - -0.0
1,269,909 - -0.3
1,269,910 - -0.7
1,269,910 - -0.0
1,269,939 + +0.2
1,269,939 + +0.4
1,269,939 + +0.0
1,269,939 + -1.1
1,269,939 + +0.1
1,269,939 + +0.2
1,269,947 - +0.3
1,269,947 - -0.5
1,269,952 - +0.4
1,269,952 - +0.3
1,270,099 + B158DRAFT_1231 0.26 -0.3
1,270,099 + B158DRAFT_1231 0.26 -0.7
1,270,107 - B158DRAFT_1231 0.28 -0.3
1,270,107 - B158DRAFT_1231 0.28 +0.2
1,270,135 + B158DRAFT_1231 0.34 +0.1
1,270,135 + B158DRAFT_1231 0.34 -2.0
1,270,135 + B158DRAFT_1231 0.34 +0.4
1,270,135 + B158DRAFT_1231 0.34 -0.9
1,270,141 - B158DRAFT_1231 0.35 +0.2
1,270,143 - B158DRAFT_1231 0.35 -0.2
1,270,215 + B158DRAFT_1231 0.50 +0.3
1,270,237 - B158DRAFT_1231 0.55 -0.8
1,270,347 - B158DRAFT_1231 0.78 -0.7
1,270,414 - -0.1
1,270,496 + -0.7
1,270,524 - -0.5
1,270,524 - +0.7
1,270,711 + -0.1
1,270,737 + B158DRAFT_1232 0.14 -0.2
1,270,745 - B158DRAFT_1232 0.18 +0.0
1,270,754 - B158DRAFT_1232 0.22 +0.2
1,270,763 + B158DRAFT_1232 0.26 -0.4
1,270,766 - B158DRAFT_1232 0.27 -0.5
1,270,849 - B158DRAFT_1232 0.63 +0.7
1,270,875 + B158DRAFT_1232 0.74 +0.1
1,270,875 + B158DRAFT_1232 0.74 +0.7
1,270,883 - B158DRAFT_1232 0.77 -0.2
1,270,883 - B158DRAFT_1232 0.77 -0.2
1,270,883 - B158DRAFT_1232 0.77 +0.0
1,270,883 - B158DRAFT_1232 0.77 -0.1
1,270,883 - B158DRAFT_1232 0.77 -0.1
1,270,883 - B158DRAFT_1232 0.77 -0.2
1,270,883 - B158DRAFT_1232 0.77 +0.7
1,270,906 + B158DRAFT_1232 0.87 +0.3
1,270,922 + +0.4
1,271,297 + -0.1
1,271,297 + +0.2
1,271,338 - B158DRAFT_1233 0.14 +0.0
1,271,341 - B158DRAFT_1233 0.14 +0.7
1,271,347 + B158DRAFT_1233 0.15 +0.2
1,271,347 + B158DRAFT_1233 0.15 +0.2
1,271,347 + B158DRAFT_1233 0.15 -0.5
1,271,347 + B158DRAFT_1233 0.15 +0.1
1,271,347 + B158DRAFT_1233 0.15 +0.6
1,271,347 + B158DRAFT_1233 0.15 -1.5
1,271,347 + B158DRAFT_1233 0.15 -0.5
1,271,347 + B158DRAFT_1233 0.15 -0.8
1,271,348 - B158DRAFT_1233 0.16 -0.0
1,271,355 - B158DRAFT_1233 0.17 -0.1
1,271,355 - B158DRAFT_1233 0.17 -0.3
1,271,355 - B158DRAFT_1233 0.17 -0.0
1,271,355 - B158DRAFT_1233 0.17 +0.5
1,271,357 + B158DRAFT_1233 0.17 +0.0
1,271,357 + B158DRAFT_1233 0.17 -0.5
1,271,362 + B158DRAFT_1233 0.18 -0.0
1,271,365 - B158DRAFT_1233 0.19 +0.4
1,271,365 - B158DRAFT_1233 0.19 -0.2
1,271,365 - B158DRAFT_1233 0.19 -0.2
1,271,365 - B158DRAFT_1233 0.19 -0.6
1,271,365 - B158DRAFT_1233 0.19 +0.1
1,271,370 - B158DRAFT_1233 0.19 +0.2
1,271,370 - B158DRAFT_1233 0.19 +0.0
1,271,390 - B158DRAFT_1233 0.23 -0.7
1,271,396 + B158DRAFT_1233 0.24 +0.1
1,271,396 + B158DRAFT_1233 0.24 +0.2
1,271,397 - B158DRAFT_1233 0.24 -0.8
1,271,404 - B158DRAFT_1233 0.25 -0.3
1,271,404 - B158DRAFT_1233 0.25 -0.1
1,271,414 - B158DRAFT_1233 0.27 -1.3
1,271,428 + B158DRAFT_1233 0.30 +0.1
1,271,428 + B158DRAFT_1233 0.30 +0.2
1,271,451 + B158DRAFT_1233 0.34 +0.2
1,271,451 + B158DRAFT_1233 0.34 -0.0
1,271,459 - B158DRAFT_1233 0.35 -1.2
1,271,483 - B158DRAFT_1233 0.39 -0.0
1,271,485 + B158DRAFT_1233 0.40 +0.2
1,271,496 + B158DRAFT_1233 0.42 -0.0
1,271,496 + B158DRAFT_1233 0.42 -0.3
1,271,496 + B158DRAFT_1233 0.42 -0.7
1,271,496 + B158DRAFT_1233 0.42 -0.3
1,271,504 + B158DRAFT_1233 0.43 -0.5
1,271,504 + B158DRAFT_1233 0.43 +0.4
1,271,504 + B158DRAFT_1233 0.43 -0.0
1,271,504 - B158DRAFT_1233 0.43 +0.2
1,271,504 - B158DRAFT_1233 0.43 -0.5
1,271,504 - B158DRAFT_1233 0.43 -0.1
1,271,512 - B158DRAFT_1233 0.44 -0.2
1,271,512 - B158DRAFT_1233 0.44 -0.1
1,271,512 - B158DRAFT_1233 0.44 -0.9
1,271,562 + B158DRAFT_1233 0.53 -0.7
1,271,569 + B158DRAFT_1233 0.54 -0.3
1,271,569 + B158DRAFT_1233 0.54 -0.1
1,271,569 + B158DRAFT_1233 0.54 +0.5
1,271,569 + B158DRAFT_1233 0.54 -0.6
1,271,569 + B158DRAFT_1233 0.54 +0.2
1,271,569 + B158DRAFT_1233 0.54 -0.2
1,271,574 + B158DRAFT_1233 0.55 -0.2
1,271,577 - B158DRAFT_1233 0.56 +0.1
1,271,579 + B158DRAFT_1233 0.56 -0.9
1,271,579 + B158DRAFT_1233 0.56 +0.3
1,271,587 - B158DRAFT_1233 0.58 -0.0
1,271,594 - B158DRAFT_1233 0.59 -0.2
1,271,594 - B158DRAFT_1233 0.59 +0.9
1,271,609 + B158DRAFT_1233 0.62 -0.9
1,271,609 + B158DRAFT_1233 0.62 -0.0
1,271,617 - B158DRAFT_1233 0.63 +1.0
1,271,617 - B158DRAFT_1233 0.63 +0.2
1,271,624 - B158DRAFT_1233 0.64 -1.3
1,271,677 - B158DRAFT_1233 0.74 -0.6
1,271,677 - B158DRAFT_1233 0.74 -0.2
1,271,687 - B158DRAFT_1233 0.75 +0.2
1,271,737 + B158DRAFT_1233 0.84 +0.5
1,271,755 + B158DRAFT_1233 0.87 -0.4
1,271,763 - B158DRAFT_1233 0.89 +0.7
1,271,763 - B158DRAFT_1233 0.89 -1.2
1,271,763 - B158DRAFT_1233 0.89 -0.1
1,271,763 - B158DRAFT_1233 0.89 -0.3
1,271,781 + +0.6
1,271,782 + +0.2
1,271,782 + -1.1
1,271,782 + +0.5
1,271,794 + +0.1
1,271,841 - -0.1
1,271,860 + -0.1
1,271,865 + +0.2
1,271,865 + -0.4

Or see this region's nucleotide sequence