Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0614

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0612 and B158DRAFT_0613 overlap by 1 nucleotidesB158DRAFT_0613 and B158DRAFT_0614 are separated by 30 nucleotidesB158DRAFT_0614 and B158DRAFT_0615 are separated by 627 nucleotides B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707 _0612 B158DRAFT_0613: B158DRAFT_0613 - Lysophospholipase L1 and related esterases, at 620,707 to 621,327 _0613 B158DRAFT_0614: B158DRAFT_0614 - dihydrodipicolinate reductase (EC 1.3.1.26), at 621,358 to 622,161 _0614 B158DRAFT_0615: B158DRAFT_0615 - carbamoyl-phosphate synthase, small subunit, at 622,789 to 623,955 _0615 Position (kb) 621 622 623Strain fitness (log2 ratio) -2 -1 0 1at 620.366 kb on + strand, within B158DRAFT_0612at 620.404 kb on + strand, within B158DRAFT_0612at 620.420 kb on - strand, within B158DRAFT_0612at 620.425 kb on - strand, within B158DRAFT_0612at 620.512 kb on - strandat 620.534 kb on + strandat 620.534 kb on + strandat 620.542 kb on - strandat 620.542 kb on - strandat 620.583 kb on - strandat 620.613 kb on + strandat 620.760 kb on + strandat 620.763 kb on + strandat 620.786 kb on + strand, within B158DRAFT_0613at 620.809 kb on - strand, within B158DRAFT_0613at 620.846 kb on + strand, within B158DRAFT_0613at 620.854 kb on - strand, within B158DRAFT_0613at 620.979 kb on + strand, within B158DRAFT_0613at 620.979 kb on + strand, within B158DRAFT_0613at 620.979 kb on + strand, within B158DRAFT_0613at 620.979 kb on + strand, within B158DRAFT_0613at 620.984 kb on + strand, within B158DRAFT_0613at 620.984 kb on + strand, within B158DRAFT_0613at 620.987 kb on - strand, within B158DRAFT_0613at 620.992 kb on - strand, within B158DRAFT_0613at 621.042 kb on + strand, within B158DRAFT_0613at 621.053 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.095 kb on + strand, within B158DRAFT_0613at 621.097 kb on + strand, within B158DRAFT_0613at 621.216 kb on + strand, within B158DRAFT_0613at 621.259 kb on + strand, within B158DRAFT_0613at 621.259 kb on + strand, within B158DRAFT_0613at 621.314 kb on + strandat 622.149 kb on - strandat 622.149 kb on - strandat 622.149 kb on - strandat 622.149 kb on - strandat 622.214 kb on - strandat 622.215 kb on - strandat 622.259 kb on - strandat 622.259 kb on - strandat 622.359 kb on - strandat 622.414 kb on - strandat 622.426 kb on + strandat 622.428 kb on - strandat 622.475 kb on + strandat 622.481 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.483 kb on - strandat 622.491 kb on - strandat 622.557 kb on + strandat 622.565 kb on - strandat 622.694 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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620,366 + B158DRAFT_0612 0.83 +0.5
620,404 + B158DRAFT_0612 0.85 +0.1
620,420 - B158DRAFT_0612 0.86 -0.6
620,425 - B158DRAFT_0612 0.86 -1.1
620,512 - -0.3
620,534 + +0.1
620,534 + -0.0
620,542 - -0.2
620,542 - -1.0
620,583 - -1.3
620,613 + -0.4
620,760 + +0.1
620,763 + +0.4
620,786 + B158DRAFT_0613 0.13 -0.9
620,809 - B158DRAFT_0613 0.16 -1.4
620,846 + B158DRAFT_0613 0.22 -0.1
620,854 - B158DRAFT_0613 0.24 -0.9
620,979 + B158DRAFT_0613 0.44 +0.1
620,979 + B158DRAFT_0613 0.44 +0.2
620,979 + B158DRAFT_0613 0.44 -0.1
620,979 + B158DRAFT_0613 0.44 -0.1
620,984 + B158DRAFT_0613 0.45 -0.8
620,984 + B158DRAFT_0613 0.45 +0.1
620,987 - B158DRAFT_0613 0.45 -1.0
620,992 - B158DRAFT_0613 0.46 -2.0
621,042 + B158DRAFT_0613 0.54 -0.6
621,053 + B158DRAFT_0613 0.56 -0.3
621,095 + B158DRAFT_0613 0.62 +0.4
621,095 + B158DRAFT_0613 0.62 +0.1
621,095 + B158DRAFT_0613 0.62 -0.8
621,095 + B158DRAFT_0613 0.62 -1.0
621,095 + B158DRAFT_0613 0.62 +0.2
621,095 + B158DRAFT_0613 0.62 +1.1
621,095 + B158DRAFT_0613 0.62 -0.1
621,095 + B158DRAFT_0613 0.62 +0.6
621,097 + B158DRAFT_0613 0.63 -0.1
621,216 + B158DRAFT_0613 0.82 -1.3
621,259 + B158DRAFT_0613 0.89 -0.7
621,259 + B158DRAFT_0613 0.89 +0.1
621,314 + -0.1
622,149 - -0.1
622,149 - +0.1
622,149 - -0.4
622,149 - -1.4
622,214 - -0.1
622,215 - +0.4
622,259 - -0.3
622,259 - -0.0
622,359 - -0.7
622,414 - -0.2
622,426 + +0.1
622,428 - -0.8
622,475 + -0.1
622,481 - -1.4
622,483 - +0.1
622,483 - -0.1
622,483 - -0.2
622,483 - -0.2
622,491 - -0.0
622,557 + -0.1
622,565 - -0.3
622,694 - -0.3

Or see this region's nucleotide sequence