Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0281

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0279 and B158DRAFT_0280 are separated by 128 nucleotidesB158DRAFT_0280 and B158DRAFT_0281 are separated by 39 nucleotidesB158DRAFT_0281 and B158DRAFT_0282 are separated by 3 nucleotidesB158DRAFT_0282 and B158DRAFT_0283 overlap by 8 nucleotides B158DRAFT_0279: B158DRAFT_0279 - alkyl hydroperoxide reductase, F subunit, at 284,787 to 286,397 _0279 B158DRAFT_0280: B158DRAFT_0280 - Protein of unknown function (DUF2007)., at 286,526 to 286,759 _0280 B158DRAFT_0281: B158DRAFT_0281 - Rhodanese-related sulfurtransferase, at 286,799 to 287,113 _0281 B158DRAFT_0282: B158DRAFT_0282 - Uncharacterized membrane protein (homolog of Drosophila rhomboid), at 287,117 to 287,716 _0282 B158DRAFT_0283: B158DRAFT_0283 - Predicted acyltransferase, at 287,709 to 288,173 _0283 Position (kb) 286 287 288Strain fitness (log2 ratio) -2 -1 0 1at 285.834 kb on - strand, within B158DRAFT_0279at 285.834 kb on - strand, within B158DRAFT_0279at 285.966 kb on + strand, within B158DRAFT_0279at 286.063 kb on - strand, within B158DRAFT_0279at 286.073 kb on + strand, within B158DRAFT_0279at 286.073 kb on + strand, within B158DRAFT_0279at 286.073 kb on + strand, within B158DRAFT_0279at 286.081 kb on - strand, within B158DRAFT_0279at 286.081 kb on - strand, within B158DRAFT_0279at 286.089 kb on + strand, within B158DRAFT_0279at 286.089 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.099 kb on + strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.107 kb on - strand, within B158DRAFT_0279at 286.127 kb on + strand, within B158DRAFT_0279at 286.127 kb on + strand, within B158DRAFT_0279at 286.135 kb on - strand, within B158DRAFT_0279at 286.240 kb on + strandat 286.286 kb on + strandat 286.303 kb on - strandat 286.417 kb on - strandat 286.419 kb on + strandat 286.419 kb on + strandat 286.419 kb on + strandat 286.419 kb on + strandat 286.419 kb on + strandat 286.474 kb on + strandat 286.496 kb on + strandat 286.567 kb on + strand, within B158DRAFT_0280at 286.728 kb on + strand, within B158DRAFT_0280at 286.886 kb on - strand, within B158DRAFT_0281at 286.886 kb on - strand, within B158DRAFT_0281at 286.932 kb on - strand, within B158DRAFT_0281at 286.935 kb on + strand, within B158DRAFT_0281at 286.940 kb on + strand, within B158DRAFT_0281at 286.948 kb on - strand, within B158DRAFT_0281at 287.055 kb on + strand, within B158DRAFT_0281at 287.055 kb on + strand, within B158DRAFT_0281at 287.055 kb on + strand, within B158DRAFT_0281at 287.063 kb on - strand, within B158DRAFT_0281at 287.063 kb on - strand, within B158DRAFT_0281at 287.149 kb on - strandat 287.149 kb on - strandat 287.155 kb on - strandat 287.165 kb on + strandat 287.219 kb on + strand, within B158DRAFT_0282at 287.237 kb on - strand, within B158DRAFT_0282at 287.254 kb on + strand, within B158DRAFT_0282at 287.330 kb on - strand, within B158DRAFT_0282at 287.401 kb on + strand, within B158DRAFT_0282at 287.426 kb on - strand, within B158DRAFT_0282at 287.568 kb on + strand, within B158DRAFT_0282at 287.574 kb on - strand, within B158DRAFT_0282at 287.650 kb on + strand, within B158DRAFT_0282at 287.653 kb on + strand, within B158DRAFT_0282at 287.653 kb on + strand, within B158DRAFT_0282at 287.661 kb on - strandat 287.672 kb on + strandat 287.672 kb on + strandat 287.762 kb on + strand, within B158DRAFT_0283at 287.770 kb on - strand, within B158DRAFT_0283at 287.811 kb on - strand, within B158DRAFT_0283at 287.866 kb on + strand, within B158DRAFT_0283at 287.866 kb on + strand, within B158DRAFT_0283at 287.871 kb on + strand, within B158DRAFT_0283at 287.874 kb on - strand, within B158DRAFT_0283at 287.874 kb on - strand, within B158DRAFT_0283at 287.899 kb on + strand, within B158DRAFT_0283at 287.924 kb on + strand, within B158DRAFT_0283at 287.924 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.929 kb on + strand, within B158DRAFT_0283at 287.932 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.937 kb on - strand, within B158DRAFT_0283at 287.944 kb on + strand, within B158DRAFT_0283at 287.944 kb on + strand, within B158DRAFT_0283at 287.944 kb on + strand, within B158DRAFT_0283at 287.949 kb on + strand, within B158DRAFT_0283at 287.952 kb on - strand, within B158DRAFT_0283at 287.956 kb on + strand, within B158DRAFT_0283at 287.964 kb on - strand, within B158DRAFT_0283at 287.964 kb on - strand, within B158DRAFT_0283at 287.964 kb on - strand, within B158DRAFT_0283at 287.964 kb on - strand, within B158DRAFT_0283at 288.082 kb on + strand, within B158DRAFT_0283at 288.087 kb on + strand, within B158DRAFT_0283at 288.087 kb on + strand, within B158DRAFT_0283at 288.092 kb on - strand, within B158DRAFT_0283at 288.095 kb on - strand, within B158DRAFT_0283

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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285,834 - B158DRAFT_0279 0.65 +0.3
285,834 - B158DRAFT_0279 0.65 -0.5
285,966 + B158DRAFT_0279 0.73 -0.5
286,063 - B158DRAFT_0279 0.79 -1.5
286,073 + B158DRAFT_0279 0.80 -1.1
286,073 + B158DRAFT_0279 0.80 -0.3
286,073 + B158DRAFT_0279 0.80 -0.2
286,081 - B158DRAFT_0279 0.80 +0.1
286,081 - B158DRAFT_0279 0.80 +0.0
286,089 + B158DRAFT_0279 0.81 +0.5
286,089 + B158DRAFT_0279 0.81 -1.3
286,099 + B158DRAFT_0279 0.81 -0.1
286,099 + B158DRAFT_0279 0.81 +0.0
286,099 + B158DRAFT_0279 0.81 +0.0
286,099 + B158DRAFT_0279 0.81 -0.5
286,099 + B158DRAFT_0279 0.81 +0.2
286,099 + B158DRAFT_0279 0.81 -0.5
286,099 + B158DRAFT_0279 0.81 +0.5
286,099 + B158DRAFT_0279 0.81 -0.1
286,099 + B158DRAFT_0279 0.81 +0.1
286,099 + B158DRAFT_0279 0.81 +0.2
286,107 - B158DRAFT_0279 0.82 -0.2
286,107 - B158DRAFT_0279 0.82 -0.3
286,107 - B158DRAFT_0279 0.82 -0.1
286,107 - B158DRAFT_0279 0.82 -0.3
286,107 - B158DRAFT_0279 0.82 -0.7
286,107 - B158DRAFT_0279 0.82 -0.4
286,107 - B158DRAFT_0279 0.82 -0.5
286,107 - B158DRAFT_0279 0.82 +0.3
286,107 - B158DRAFT_0279 0.82 -0.2
286,127 + B158DRAFT_0279 0.83 +0.4
286,127 + B158DRAFT_0279 0.83 +0.0
286,135 - B158DRAFT_0279 0.84 +0.4
286,240 + -0.5
286,286 + +0.2
286,303 - -2.1
286,417 - -0.1
286,419 + +0.4
286,419 + -2.3
286,419 + -0.8
286,419 + +0.2
286,419 + -0.1
286,474 + -1.0
286,496 + -0.4
286,567 + B158DRAFT_0280 0.18 -1.7
286,728 + B158DRAFT_0280 0.86 -0.4
286,886 - B158DRAFT_0281 0.28 +0.0
286,886 - B158DRAFT_0281 0.28 +0.1
286,932 - B158DRAFT_0281 0.42 +0.4
286,935 + B158DRAFT_0281 0.43 -0.0
286,940 + B158DRAFT_0281 0.45 -0.5
286,948 - B158DRAFT_0281 0.47 -0.1
287,055 + B158DRAFT_0281 0.81 +0.0
287,055 + B158DRAFT_0281 0.81 -0.5
287,055 + B158DRAFT_0281 0.81 -0.3
287,063 - B158DRAFT_0281 0.84 -0.0
287,063 - B158DRAFT_0281 0.84 +0.6
287,149 - -0.3
287,149 - +0.4
287,155 - +0.1
287,165 + -0.5
287,219 + B158DRAFT_0282 0.17 -1.8
287,237 - B158DRAFT_0282 0.20 +0.1
287,254 + B158DRAFT_0282 0.23 -0.2
287,330 - B158DRAFT_0282 0.35 -0.4
287,401 + B158DRAFT_0282 0.47 -0.5
287,426 - B158DRAFT_0282 0.52 -0.2
287,568 + B158DRAFT_0282 0.75 -0.0
287,574 - B158DRAFT_0282 0.76 -0.1
287,650 + B158DRAFT_0282 0.89 +0.3
287,653 + B158DRAFT_0282 0.89 -0.1
287,653 + B158DRAFT_0282 0.89 +0.3
287,661 - +0.2
287,672 + -0.3
287,672 + -1.0
287,762 + B158DRAFT_0283 0.11 +0.2
287,770 - B158DRAFT_0283 0.13 +0.6
287,811 - B158DRAFT_0283 0.22 -0.1
287,866 + B158DRAFT_0283 0.34 +1.0
287,866 + B158DRAFT_0283 0.34 +0.2
287,871 + B158DRAFT_0283 0.35 -1.3
287,874 - B158DRAFT_0283 0.35 -0.1
287,874 - B158DRAFT_0283 0.35 +0.5
287,899 + B158DRAFT_0283 0.41 +0.0
287,924 + B158DRAFT_0283 0.46 +0.4
287,924 + B158DRAFT_0283 0.46 +0.3
287,929 + B158DRAFT_0283 0.47 +0.2
287,929 + B158DRAFT_0283 0.47 -2.2
287,929 + B158DRAFT_0283 0.47 +0.2
287,929 + B158DRAFT_0283 0.47 +0.4
287,929 + B158DRAFT_0283 0.47 -0.1
287,929 + B158DRAFT_0283 0.47 -0.1
287,929 + B158DRAFT_0283 0.47 -0.1
287,932 - B158DRAFT_0283 0.48 +1.2
287,937 - B158DRAFT_0283 0.49 -0.2
287,937 - B158DRAFT_0283 0.49 -0.2
287,937 - B158DRAFT_0283 0.49 -0.2
287,937 - B158DRAFT_0283 0.49 -0.2
287,937 - B158DRAFT_0283 0.49 -0.6
287,937 - B158DRAFT_0283 0.49 -0.4
287,937 - B158DRAFT_0283 0.49 +0.4
287,937 - B158DRAFT_0283 0.49 -0.6
287,944 + B158DRAFT_0283 0.51 +0.2
287,944 + B158DRAFT_0283 0.51 -0.3
287,944 + B158DRAFT_0283 0.51 -0.1
287,949 + B158DRAFT_0283 0.52 -0.6
287,952 - B158DRAFT_0283 0.52 -0.3
287,956 + B158DRAFT_0283 0.53 -0.8
287,964 - B158DRAFT_0283 0.55 -0.8
287,964 - B158DRAFT_0283 0.55 -0.5
287,964 - B158DRAFT_0283 0.55 -0.0
287,964 - B158DRAFT_0283 0.55 -0.2
288,082 + B158DRAFT_0283 0.80 -0.4
288,087 + B158DRAFT_0283 0.81 +0.1
288,087 + B158DRAFT_0283 0.81 -0.1
288,092 - B158DRAFT_0283 0.82 -0.4
288,095 - B158DRAFT_0283 0.83 -0.6

Or see this region's nucleotide sequence