Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0256

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0255 and B158DRAFT_0256 are separated by 46 nucleotidesB158DRAFT_0256 and B158DRAFT_0257 are separated by 288 nucleotidesB158DRAFT_0257 and B158DRAFT_0258 are separated by 7 nucleotides B158DRAFT_0255: B158DRAFT_0255 - Uncharacterized enzyme of heme biosynthesis, at 261,180 to 262,406 _0255 B158DRAFT_0256: B158DRAFT_0256 - hypothetical protein, at 262,453 to 262,686 _0256 B158DRAFT_0257: B158DRAFT_0257 - conserved hypothetical metal-binding protein, at 262,975 to 263,238 _0257 B158DRAFT_0258: B158DRAFT_0258 - transporter, NhaC family (TC 2.A.35), at 263,246 to 264,598 _0258 Position (kb) 262 263Strain fitness (log2 ratio) -2 -1 0 1at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.523 kb on + strand, within B158DRAFT_0255at 261.533 kb on + strand, within B158DRAFT_0255at 261.562 kb on + strand, within B158DRAFT_0255at 261.570 kb on - strand, within B158DRAFT_0255at 261.575 kb on - strand, within B158DRAFT_0255at 261.579 kb on + strand, within B158DRAFT_0255at 261.640 kb on + strand, within B158DRAFT_0255at 261.645 kb on + strand, within B158DRAFT_0255at 261.658 kb on - strand, within B158DRAFT_0255at 261.714 kb on - strand, within B158DRAFT_0255at 261.784 kb on + strand, within B158DRAFT_0255at 261.854 kb on - strand, within B158DRAFT_0255at 261.915 kb on + strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.970 kb on + strand, within B158DRAFT_0255at 261.970 kb on + strand, within B158DRAFT_0255at 261.973 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 262.006 kb on - strand, within B158DRAFT_0255at 262.034 kb on + strand, within B158DRAFT_0255at 262.042 kb on - strand, within B158DRAFT_0255at 262.157 kb on - strand, within B158DRAFT_0255at 262.167 kb on - strand, within B158DRAFT_0255at 262.169 kb on + strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255at 262.189 kb on - strand, within B158DRAFT_0255at 262.269 kb on + strand, within B158DRAFT_0255at 262.269 kb on - strand, within B158DRAFT_0255at 262.271 kb on + strand, within B158DRAFT_0255at 262.276 kb on + strand, within B158DRAFT_0255at 262.279 kb on - strand, within B158DRAFT_0255at 262.306 kb on + strandat 262.488 kb on + strand, within B158DRAFT_0256at 262.488 kb on + strand, within B158DRAFT_0256at 262.496 kb on - strand, within B158DRAFT_0256at 262.496 kb on - strand, within B158DRAFT_0256at 262.575 kb on - strand, within B158DRAFT_0256at 262.620 kb on - strand, within B158DRAFT_0256at 262.620 kb on - strand, within B158DRAFT_0256at 262.628 kb on - strand, within B158DRAFT_0256at 262.628 kb on - strand, within B158DRAFT_0256at 262.690 kb on + strandat 262.734 kb on + strandat 262.749 kb on + strandat 262.821 kb on + strandat 262.929 kb on + strandat 262.929 kb on + strandat 262.929 kb on + strandat 262.931 kb on - strandat 262.933 kb on + strandat 262.937 kb on - strandat 262.937 kb on - strandat 262.937 kb on - strandat 262.942 kb on - strandat 262.950 kb on + strandat 262.981 kb on - strandat 263.132 kb on - strand, within B158DRAFT_0257at 263.132 kb on - strand, within B158DRAFT_0257at 263.251 kb on - strandat 263.272 kb on - strandat 263.272 kb on - strandat 263.304 kb on + strandat 263.345 kb on + strandat 263.351 kb on + strandat 263.374 kb on - strandat 263.376 kb on - strandat 263.539 kb on - strand, within B158DRAFT_0258at 263.564 kb on + strand, within B158DRAFT_0258at 263.581 kb on - strand, within B158DRAFT_0258

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
remove
261,464 + B158DRAFT_0255 0.23 +0.2
261,464 + B158DRAFT_0255 0.23 +0.3
261,464 + B158DRAFT_0255 0.23 -0.5
261,464 + B158DRAFT_0255 0.23 +0.1
261,464 + B158DRAFT_0255 0.23 +0.5
261,472 - B158DRAFT_0255 0.24 +0.0
261,472 - B158DRAFT_0255 0.24 +0.4
261,472 - B158DRAFT_0255 0.24 +0.2
261,500 + B158DRAFT_0255 0.26 +0.2
261,500 + B158DRAFT_0255 0.26 +0.7
261,500 + B158DRAFT_0255 0.26 +0.2
261,500 + B158DRAFT_0255 0.26 +0.3
261,508 - B158DRAFT_0255 0.27 +0.3
261,508 - B158DRAFT_0255 0.27 +0.3
261,508 - B158DRAFT_0255 0.27 +0.1
261,508 - B158DRAFT_0255 0.27 +0.5
261,523 + B158DRAFT_0255 0.28 +0.4
261,533 + B158DRAFT_0255 0.29 +0.4
261,562 + B158DRAFT_0255 0.31 -0.4
261,570 - B158DRAFT_0255 0.32 +0.2
261,575 - B158DRAFT_0255 0.32 -0.2
261,579 + B158DRAFT_0255 0.33 +0.7
261,640 + B158DRAFT_0255 0.37 +0.1
261,645 + B158DRAFT_0255 0.38 +0.7
261,658 - B158DRAFT_0255 0.39 -0.3
261,714 - B158DRAFT_0255 0.44 +0.3
261,784 + B158DRAFT_0255 0.49 +0.4
261,854 - B158DRAFT_0255 0.55 +0.4
261,915 + B158DRAFT_0255 0.60 +0.3
261,928 - B158DRAFT_0255 0.61 +0.4
261,928 - B158DRAFT_0255 0.61 -0.0
261,928 - B158DRAFT_0255 0.61 +0.7
261,954 - B158DRAFT_0255 0.63 -0.6
261,954 - B158DRAFT_0255 0.63 +0.0
261,954 - B158DRAFT_0255 0.63 +0.1
261,970 + B158DRAFT_0255 0.64 -0.4
261,970 + B158DRAFT_0255 0.64 +0.0
261,973 - B158DRAFT_0255 0.65 +0.5
261,978 - B158DRAFT_0255 0.65 +1.4
261,978 - B158DRAFT_0255 0.65 +0.0
261,978 - B158DRAFT_0255 0.65 -0.7
261,978 - B158DRAFT_0255 0.65 -0.8
261,978 - B158DRAFT_0255 0.65 -0.3
262,006 - B158DRAFT_0255 0.67 -0.1
262,034 + B158DRAFT_0255 0.70 +0.3
262,042 - B158DRAFT_0255 0.70 -1.3
262,157 - B158DRAFT_0255 0.80 +0.4
262,167 - B158DRAFT_0255 0.80 +0.1
262,169 + B158DRAFT_0255 0.81 -0.1
262,177 - B158DRAFT_0255 0.81 +0.9
262,177 - B158DRAFT_0255 0.81 +0.0
262,177 - B158DRAFT_0255 0.81 -0.5
262,189 - B158DRAFT_0255 0.82 -0.2
262,269 + B158DRAFT_0255 0.89 +0.0
262,269 - B158DRAFT_0255 0.89 +0.8
262,271 + B158DRAFT_0255 0.89 +1.4
262,276 + B158DRAFT_0255 0.89 -0.6
262,279 - B158DRAFT_0255 0.90 +0.3
262,306 + -0.7
262,488 + B158DRAFT_0256 0.15 +0.5
262,488 + B158DRAFT_0256 0.15 -0.2
262,496 - B158DRAFT_0256 0.18 -1.0
262,496 - B158DRAFT_0256 0.18 +0.3
262,575 - B158DRAFT_0256 0.52 +0.0
262,620 - B158DRAFT_0256 0.71 +0.1
262,620 - B158DRAFT_0256 0.71 -0.7
262,628 - B158DRAFT_0256 0.75 -0.0
262,628 - B158DRAFT_0256 0.75 -0.5
262,690 + -0.1
262,734 + -0.8
262,749 + +0.5
262,821 + -0.1
262,929 + -0.3
262,929 + -0.4
262,929 + +0.0
262,931 - +0.3
262,933 + -0.4
262,937 - +0.1
262,937 - -0.2
262,937 - -0.1
262,942 - -0.4
262,950 + -0.7
262,981 - -0.2
263,132 - B158DRAFT_0257 0.59 -0.2
263,132 - B158DRAFT_0257 0.59 +0.9
263,251 - -2.4
263,272 - -0.4
263,272 - -1.0
263,304 + -1.0
263,345 + -0.9
263,351 + -0.4
263,374 - -1.9
263,376 - -0.9
263,539 - B158DRAFT_0258 0.22 -1.7
263,564 + B158DRAFT_0258 0.24 -1.6
263,581 - B158DRAFT_0258 0.25 -1.4

Or see this region's nucleotide sequence