Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2220

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2219 and B158DRAFT_2220 are separated by 27 nucleotidesB158DRAFT_2220 and B158DRAFT_2221 are separated by 262 nucleotides B158DRAFT_2219: B158DRAFT_2219 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 367,941 to 369,416 _2219 B158DRAFT_2220: B158DRAFT_2220 - arginine N-succinyltransferase, at 369,444 to 370,466 _2220 B158DRAFT_2221: B158DRAFT_2221 - acetylornithine and succinylornithine transaminases/succinylornithine transaminase family, at 370,729 to 371,949 _2221 Position (kb) 369 370 371Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 368.566 kb on + strand, within B158DRAFT_2219at 368.566 kb on + strand, within B158DRAFT_2219at 368.571 kb on + strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.586 kb on + strand, within B158DRAFT_2219at 368.648 kb on - strand, within B158DRAFT_2219at 368.676 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.767 kb on + strand, within B158DRAFT_2219at 368.769 kb on - strand, within B158DRAFT_2219at 368.807 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.832 kb on - strand, within B158DRAFT_2219at 368.844 kb on - strand, within B158DRAFT_2219at 368.886 kb on - strand, within B158DRAFT_2219at 369.042 kb on + strand, within B158DRAFT_2219at 369.050 kb on - strand, within B158DRAFT_2219at 369.251 kb on - strand, within B158DRAFT_2219at 369.335 kb on + strandat 369.478 kb on - strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.530 kb on - strandat 369.530 kb on - strandat 369.536 kb on - strandat 369.538 kb on + strandat 369.538 kb on + strandat 369.616 kb on + strand, within B158DRAFT_2220at 369.664 kb on + strand, within B158DRAFT_2220at 369.693 kb on + strand, within B158DRAFT_2220at 369.701 kb on - strand, within B158DRAFT_2220at 369.745 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.759 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.778 kb on + strand, within B158DRAFT_2220at 369.778 kb on + strand, within B158DRAFT_2220at 369.786 kb on - strand, within B158DRAFT_2220at 369.790 kb on + strand, within B158DRAFT_2220at 369.790 kb on + strand, within B158DRAFT_2220at 369.846 kb on + strand, within B158DRAFT_2220at 369.895 kb on + strand, within B158DRAFT_2220at 369.900 kb on + strand, within B158DRAFT_2220at 369.946 kb on + strand, within B158DRAFT_2220at 369.954 kb on + strand, within B158DRAFT_2220at 369.972 kb on - strand, within B158DRAFT_2220at 369.981 kb on - strand, within B158DRAFT_2220at 369.985 kb on + strand, within B158DRAFT_2220at 370.021 kb on + strand, within B158DRAFT_2220at 370.021 kb on + strand, within B158DRAFT_2220at 370.077 kb on - strand, within B158DRAFT_2220at 370.084 kb on + strand, within B158DRAFT_2220at 370.084 kb on + strand, within B158DRAFT_2220at 370.088 kb on + strand, within B158DRAFT_2220at 370.114 kb on + strand, within B158DRAFT_2220at 370.115 kb on - strand, within B158DRAFT_2220at 370.174 kb on - strand, within B158DRAFT_2220at 370.189 kb on + strand, within B158DRAFT_2220at 370.196 kb on + strand, within B158DRAFT_2220at 370.226 kb on - strand, within B158DRAFT_2220at 370.241 kb on + strand, within B158DRAFT_2220at 370.252 kb on + strand, within B158DRAFT_2220at 370.257 kb on + strand, within B158DRAFT_2220at 370.257 kb on - strand, within B158DRAFT_2220at 370.303 kb on + strand, within B158DRAFT_2220at 370.313 kb on + strand, within B158DRAFT_2220at 370.399 kb on + strandat 370.461 kb on - strandat 370.603 kb on - strandat 370.605 kb on - strandat 370.635 kb on + strandat 370.636 kb on - strandat 370.636 kb on - strandat 370.664 kb on + strandat 370.672 kb on - strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.696 kb on + strandat 370.698 kb on + strandat 370.698 kb on + strandat 370.698 kb on + strandat 370.698 kb on + strandat 370.698 kb on + strandat 370.699 kb on - strandat 370.704 kb on - strandat 370.704 kb on - strandat 370.704 kb on - strandat 370.704 kb on - strandat 370.704 kb on - strandat 370.704 kb on - strandat 370.708 kb on + strandat 370.708 kb on + strandat 370.708 kb on + strandat 370.708 kb on + strandat 370.714 kb on + strandat 370.716 kb on - strandat 370.716 kb on - strandat 370.716 kb on - strandat 370.716 kb on - strandat 370.722 kb on - strandat 370.723 kb on - strandat 370.769 kb on + strandat 370.794 kb on + strandat 370.840 kb on - strandat 370.891 kb on - strand, within B158DRAFT_2221at 370.902 kb on + strand, within B158DRAFT_2221at 370.923 kb on + strand, within B158DRAFT_2221at 370.923 kb on + strand, within B158DRAFT_2221at 370.923 kb on + strand, within B158DRAFT_2221at 370.931 kb on - strand, within B158DRAFT_2221at 370.961 kb on - strand, within B158DRAFT_2221at 371.052 kb on + strand, within B158DRAFT_2221at 371.067 kb on - strand, within B158DRAFT_2221at 371.077 kb on + strand, within B158DRAFT_2221at 371.162 kb on + strand, within B158DRAFT_2221at 371.162 kb on + strand, within B158DRAFT_2221at 371.221 kb on - strand, within B158DRAFT_2221at 371.221 kb on - strand, within B158DRAFT_2221at 371.221 kb on - strand, within B158DRAFT_2221at 371.248 kb on + strand, within B158DRAFT_2221at 371.256 kb on - strand, within B158DRAFT_2221at 371.256 kb on - strand, within B158DRAFT_2221at 371.312 kb on + strand, within B158DRAFT_2221at 371.312 kb on + strand, within B158DRAFT_2221at 371.322 kb on + strand, within B158DRAFT_2221at 371.440 kb on + strand, within B158DRAFT_2221at 371.460 kb on + strand, within B158DRAFT_2221

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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368,566 + B158DRAFT_2219 0.42 -0.4
368,566 + B158DRAFT_2219 0.42 -1.4
368,571 + B158DRAFT_2219 0.43 -1.1
368,579 - B158DRAFT_2219 0.43 -1.5
368,579 - B158DRAFT_2219 0.43 +0.5
368,579 - B158DRAFT_2219 0.43 -0.1
368,586 + B158DRAFT_2219 0.44 -0.9
368,648 - B158DRAFT_2219 0.48 -0.2
368,676 + B158DRAFT_2219 0.50 -1.2
368,761 + B158DRAFT_2219 0.56 -1.4
368,761 + B158DRAFT_2219 0.56 -1.5
368,767 + B158DRAFT_2219 0.56 -1.9
368,769 - B158DRAFT_2219 0.56 +0.1
368,807 + B158DRAFT_2219 0.59 -1.8
368,824 + B158DRAFT_2219 0.60 -0.2
368,824 + B158DRAFT_2219 0.60 +1.1
368,832 - B158DRAFT_2219 0.60 -1.2
368,844 - B158DRAFT_2219 0.61 -0.7
368,886 - B158DRAFT_2219 0.64 +0.6
369,042 + B158DRAFT_2219 0.75 -1.8
369,050 - B158DRAFT_2219 0.75 -0.6
369,251 - B158DRAFT_2219 0.89 +0.9
369,335 + -1.2
369,478 - -0.2
369,512 + -0.2
369,512 + -0.2
369,512 + -0.5
369,512 + +0.6
369,520 - +0.4
369,520 - -1.0
369,520 - -1.4
369,520 - -0.5
369,520 - +1.0
369,520 - +0.7
369,520 - +0.5
369,520 - +2.1
369,520 - +0.5
369,520 - -0.2
369,520 - -0.5
369,520 - -1.4
369,520 - -0.0
369,520 - -0.8
369,520 - -0.4
369,520 - -1.0
369,520 - -0.0
369,520 - -1.4
369,530 - +0.6
369,530 - -0.9
369,536 - -0.0
369,538 + -0.5
369,538 + +0.5
369,616 + B158DRAFT_2220 0.17 +0.4
369,664 + B158DRAFT_2220 0.22 -0.1
369,693 + B158DRAFT_2220 0.24 -0.6
369,701 - B158DRAFT_2220 0.25 -0.1
369,745 + B158DRAFT_2220 0.29 -0.4
369,756 + B158DRAFT_2220 0.30 -0.4
369,756 + B158DRAFT_2220 0.30 -0.6
369,756 + B158DRAFT_2220 0.30 +1.1
369,756 + B158DRAFT_2220 0.30 +0.1
369,756 + B158DRAFT_2220 0.30 +1.3
369,756 + B158DRAFT_2220 0.30 -2.9
369,759 - B158DRAFT_2220 0.31 +0.5
369,764 - B158DRAFT_2220 0.31 +0.5
369,764 - B158DRAFT_2220 0.31 -0.4
369,764 - B158DRAFT_2220 0.31 -1.0
369,764 - B158DRAFT_2220 0.31 +0.3
369,764 - B158DRAFT_2220 0.31 -0.9
369,764 - B158DRAFT_2220 0.31 +0.4
369,764 - B158DRAFT_2220 0.31 +0.6
369,764 - B158DRAFT_2220 0.31 +0.3
369,764 - B158DRAFT_2220 0.31 -0.3
369,764 - B158DRAFT_2220 0.31 -0.3
369,778 + B158DRAFT_2220 0.33 -2.5
369,778 + B158DRAFT_2220 0.33 -1.2
369,786 - B158DRAFT_2220 0.33 -0.3
369,790 + B158DRAFT_2220 0.34 -0.2
369,790 + B158DRAFT_2220 0.34 -0.1
369,846 + B158DRAFT_2220 0.39 +0.5
369,895 + B158DRAFT_2220 0.44 +0.2
369,900 + B158DRAFT_2220 0.45 +0.3
369,946 + B158DRAFT_2220 0.49 -0.6
369,954 + B158DRAFT_2220 0.50 -0.1
369,972 - B158DRAFT_2220 0.52 -1.1
369,981 - B158DRAFT_2220 0.52 -0.2
369,985 + B158DRAFT_2220 0.53 -0.2
370,021 + B158DRAFT_2220 0.56 +0.3
370,021 + B158DRAFT_2220 0.56 +0.2
370,077 - B158DRAFT_2220 0.62 -1.2
370,084 + B158DRAFT_2220 0.63 -0.6
370,084 + B158DRAFT_2220 0.63 +0.1
370,088 + B158DRAFT_2220 0.63 -0.2
370,114 + B158DRAFT_2220 0.65 +0.1
370,115 - B158DRAFT_2220 0.66 -1.5
370,174 - B158DRAFT_2220 0.71 -0.5
370,189 + B158DRAFT_2220 0.73 -0.2
370,196 + B158DRAFT_2220 0.74 -0.3
370,226 - B158DRAFT_2220 0.76 -0.2
370,241 + B158DRAFT_2220 0.78 -1.8
370,252 + B158DRAFT_2220 0.79 +1.1
370,257 + B158DRAFT_2220 0.79 -1.1
370,257 - B158DRAFT_2220 0.79 -1.4
370,303 + B158DRAFT_2220 0.84 +0.0
370,313 + B158DRAFT_2220 0.85 +0.0
370,399 + +0.2
370,461 - -0.1
370,603 - -0.1
370,605 - +0.1
370,635 + -0.1
370,636 - -0.9
370,636 - -0.6
370,664 + -1.2
370,672 - -1.4
370,696 + -0.4
370,696 + +0.5
370,696 + -1.3
370,696 + -0.8
370,696 + +0.8
370,696 + -0.5
370,696 + +0.2
370,696 + -1.5
370,698 + -0.0
370,698 + -0.3
370,698 + -0.1
370,698 + -1.6
370,698 + -1.8
370,699 - -0.8
370,704 - -0.7
370,704 - -0.6
370,704 - -0.9
370,704 - -0.1
370,704 - -1.4
370,704 - -1.7
370,708 + -0.7
370,708 + +0.4
370,708 + -2.7
370,708 + -0.3
370,714 + -0.9
370,716 - -1.3
370,716 - -1.2
370,716 - -1.2
370,716 - +1.8
370,722 - -1.8
370,723 - -0.5
370,769 + -0.4
370,794 + -1.2
370,840 - -0.9
370,891 - B158DRAFT_2221 0.13 -0.6
370,902 + B158DRAFT_2221 0.14 -1.1
370,923 + B158DRAFT_2221 0.16 -1.1
370,923 + B158DRAFT_2221 0.16 -0.4
370,923 + B158DRAFT_2221 0.16 -0.7
370,931 - B158DRAFT_2221 0.17 -2.3
370,961 - B158DRAFT_2221 0.19 -0.3
371,052 + B158DRAFT_2221 0.26 -1.4
371,067 - B158DRAFT_2221 0.28 -0.7
371,077 + B158DRAFT_2221 0.29 -0.9
371,162 + B158DRAFT_2221 0.35 -0.6
371,162 + B158DRAFT_2221 0.35 -0.4
371,221 - B158DRAFT_2221 0.40 -1.6
371,221 - B158DRAFT_2221 0.40 -1.5
371,221 - B158DRAFT_2221 0.40 -2.3
371,248 + B158DRAFT_2221 0.43 -1.3
371,256 - B158DRAFT_2221 0.43 -2.1
371,256 - B158DRAFT_2221 0.43 +0.2
371,312 + B158DRAFT_2221 0.48 -2.1
371,312 + B158DRAFT_2221 0.48 -2.4
371,322 + B158DRAFT_2221 0.49 -0.5
371,440 + B158DRAFT_2221 0.58 -1.3
371,460 + B158DRAFT_2221 0.60 -1.6

Or see this region's nucleotide sequence