Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2179 and B158DRAFT_2180 are separated by 243 nucleotides B158DRAFT_2180 and B158DRAFT_2181 are separated by 339 nucleotides
B158DRAFT_2179: B158DRAFT_2179 - L-aspartate oxidase (EC 1.4.3.16), at 325,571 to 327,187
_2179
B158DRAFT_2180: B158DRAFT_2180 - RNA polymerase, sigma-24 subunit, RpoE, at 327,431 to 328,021
_2180
B158DRAFT_2181: B158DRAFT_2181 - Negative regulator of sigma E activity, at 328,361 to 329,041
_2181
Position (kb) 327
328
329 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 326.485 kb on + strand, within B158DRAFT_2179 at 326.494 kb on - strand, within B158DRAFT_2179 at 326.499 kb on + strand, within B158DRAFT_2179 at 326.499 kb on + strand, within B158DRAFT_2179 at 326.507 kb on - strand, within B158DRAFT_2179 at 326.512 kb on - strand, within B158DRAFT_2179 at 326.554 kb on + strand, within B158DRAFT_2179 at 326.554 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.769 kb on + strand, within B158DRAFT_2179 at 326.860 kb on + strand, within B158DRAFT_2179 at 326.901 kb on - strand, within B158DRAFT_2179 at 326.911 kb on - strand, within B158DRAFT_2179 at 326.911 kb on - strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 327.012 kb on - strand, within B158DRAFT_2179 at 327.139 kb on + strand at 327.242 kb on + strand at 327.348 kb on + strand at 327.353 kb on + strand at 327.353 kb on + strand at 327.353 kb on + strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.413 kb on - strand at 327.433 kb on + strand at 327.433 kb on - strand at 327.439 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.451 kb on - strand at 327.468 kb on - strand at 327.535 kb on - strand, within B158DRAFT_2180 at 327.553 kb on - strand, within B158DRAFT_2180 at 327.569 kb on - strand, within B158DRAFT_2180 at 327.595 kb on + strand, within B158DRAFT_2180 at 327.603 kb on - strand, within B158DRAFT_2180 at 327.665 kb on + strand, within B158DRAFT_2180 at 327.702 kb on + strand, within B158DRAFT_2180 at 327.708 kb on + strand, within B158DRAFT_2180 at 327.856 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.925 kb on - strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.014 kb on - strand at 328.014 kb on - strand at 328.084 kb on + strand at 328.593 kb on + strand, within B158DRAFT_2181 at 328.629 kb on + strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.765 kb on + strand, within B158DRAFT_2181 at 328.947 kb on - strand, within B158DRAFT_2181 at 328.981 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 326,485 + B158DRAFT_2179 0.57 -0.6 326,494 - B158DRAFT_2179 0.57 -2.1 326,499 + B158DRAFT_2179 0.57 +0.5 326,499 + B158DRAFT_2179 0.57 -0.5 326,507 - B158DRAFT_2179 0.58 -2.6 326,512 - B158DRAFT_2179 0.58 -2.7 326,554 + B158DRAFT_2179 0.61 -0.2 326,554 + B158DRAFT_2179 0.61 -2.1 326,745 + B158DRAFT_2179 0.73 +0.1 326,745 + B158DRAFT_2179 0.73 -1.5 326,745 + B158DRAFT_2179 0.73 -1.9 326,753 - B158DRAFT_2179 0.73 -3.3 326,753 - B158DRAFT_2179 0.73 -1.7 326,753 - B158DRAFT_2179 0.73 -2.0 326,769 + B158DRAFT_2179 0.74 -2.0 326,860 + B158DRAFT_2179 0.80 -0.6 326,901 - B158DRAFT_2179 0.82 -1.3 326,911 - B158DRAFT_2179 0.83 +0.5 326,911 - B158DRAFT_2179 0.83 -0.7 326,941 + B158DRAFT_2179 0.85 -2.4 326,941 + B158DRAFT_2179 0.85 -1.9 326,941 + B158DRAFT_2179 0.85 -2.1 326,941 + B158DRAFT_2179 0.85 -1.6 326,949 - B158DRAFT_2179 0.85 -1.4 326,949 - B158DRAFT_2179 0.85 -0.1 326,949 - B158DRAFT_2179 0.85 -1.5 326,949 - B158DRAFT_2179 0.85 -0.7 326,949 - B158DRAFT_2179 0.85 -0.2 327,012 - B158DRAFT_2179 0.89 -0.5 327,139 + +2.1 327,242 + -0.6 327,348 + -0.0 327,353 + -1.2 327,353 + -0.1 327,353 + -0.2 327,361 - -0.3 327,361 - -0.1 327,361 - +0.3 327,361 - -0.4 327,361 - -0.3 327,361 - -0.0 327,413 - -0.2 327,433 + -0.1 327,433 - -0.3 327,439 + -0.8 327,443 + -0.6 327,443 + -1.9 327,443 + -1.5 327,443 + -0.2 327,451 - +0.1 327,468 - -1.0 327,535 - B158DRAFT_2180 0.18 -0.1 327,553 - B158DRAFT_2180 0.21 -0.4 327,569 - B158DRAFT_2180 0.23 -0.6 327,595 + B158DRAFT_2180 0.28 -0.4 327,603 - B158DRAFT_2180 0.29 -0.6 327,665 + B158DRAFT_2180 0.40 -0.3 327,702 + B158DRAFT_2180 0.46 -0.6 327,708 + B158DRAFT_2180 0.47 -0.2 327,856 + B158DRAFT_2180 0.72 +0.3 327,917 + B158DRAFT_2180 0.82 -1.1 327,917 + B158DRAFT_2180 0.82 -0.6 327,917 + B158DRAFT_2180 0.82 -0.5 327,917 + B158DRAFT_2180 0.82 -1.2 327,925 - B158DRAFT_2180 0.84 -0.3 327,935 + B158DRAFT_2180 0.85 -0.2 327,935 + B158DRAFT_2180 0.85 -1.1 328,006 + -0.4 328,006 + +0.1 328,006 + -0.5 328,006 + -1.5 328,006 + -0.2 328,014 - -0.6 328,014 - -0.2 328,084 + -2.5 328,593 + B158DRAFT_2181 0.34 -0.6 328,629 + B158DRAFT_2181 0.39 -0.7 328,637 - B158DRAFT_2181 0.41 -0.5 328,637 - B158DRAFT_2181 0.41 -0.1 328,644 + B158DRAFT_2181 0.42 -0.1 328,644 + B158DRAFT_2181 0.42 -0.7 328,765 + B158DRAFT_2181 0.59 -0.9 328,947 - B158DRAFT_2181 0.86 +0.3 328,981 + -0.9
Or see this region's nucleotide sequence