Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1196 and B158DRAFT_1197 are separated by 74 nucleotides B158DRAFT_1197 and B158DRAFT_1198 overlap by 1 nucleotides B158DRAFT_1198 and B158DRAFT_1199 are separated by 56 nucleotides B158DRAFT_1199 and B158DRAFT_1200 are separated by 99 nucleotides
B158DRAFT_1196: B158DRAFT_1196 - Uncharacterized protein conserved in bacteria, at 1,235,460 to 1,235,945
_1196
B158DRAFT_1197: B158DRAFT_1197 - ABC-type multidrug transport system, ATPase component, at 1,236,020 to 1,236,865
_1197
B158DRAFT_1198: B158DRAFT_1198 - ABC-type multidrug transport system, permease component, at 1,236,865 to 1,238,166
_1198
B158DRAFT_1199: B158DRAFT_1199 - Uncharacterized protein conserved in bacteria, at 1,238,223 to 1,238,450
_1199
B158DRAFT_1200: B158DRAFT_1200 - fumarase, class II (EC 4.2.1.2), at 1,238,550 to 1,239,911
_1200
Position (kb)
1236
1237
1238
1239 Strain fitness (log2 ratio)
-1
0
1 at 1235.940 kb on + strand at 1235.940 kb on + strand at 1235.973 kb on - strand at 1236.028 kb on + strand at 1236.034 kb on + strand at 1236.046 kb on + strand at 1236.129 kb on - strand, within B158DRAFT_1197 at 1236.167 kb on - strand, within B158DRAFT_1197 at 1236.174 kb on + strand, within B158DRAFT_1197 at 1236.174 kb on + strand, within B158DRAFT_1197 at 1236.177 kb on - strand, within B158DRAFT_1197 at 1236.177 kb on - strand, within B158DRAFT_1197 at 1236.182 kb on - strand, within B158DRAFT_1197 at 1236.184 kb on + strand, within B158DRAFT_1197 at 1236.191 kb on + strand, within B158DRAFT_1197 at 1236.191 kb on + strand, within B158DRAFT_1197 at 1236.204 kb on + strand, within B158DRAFT_1197 at 1236.284 kb on + strand, within B158DRAFT_1197 at 1236.375 kb on + strand, within B158DRAFT_1197 at 1236.375 kb on + strand, within B158DRAFT_1197 at 1236.377 kb on + strand, within B158DRAFT_1197 at 1236.623 kb on - strand, within B158DRAFT_1197 at 1236.623 kb on - strand, within B158DRAFT_1197 at 1236.623 kb on - strand, within B158DRAFT_1197 at 1236.623 kb on - strand, within B158DRAFT_1197 at 1236.689 kb on - strand, within B158DRAFT_1197 at 1236.691 kb on + strand, within B158DRAFT_1197 at 1236.698 kb on - strand, within B158DRAFT_1197 at 1236.706 kb on - strand, within B158DRAFT_1197 at 1236.708 kb on + strand, within B158DRAFT_1197 at 1236.708 kb on + strand, within B158DRAFT_1197 at 1236.708 kb on + strand, within B158DRAFT_1197 at 1236.716 kb on - strand, within B158DRAFT_1197 at 1237.035 kb on + strand, within B158DRAFT_1198 at 1237.074 kb on - strand, within B158DRAFT_1198 at 1237.141 kb on + strand, within B158DRAFT_1198 at 1237.185 kb on + strand, within B158DRAFT_1198 at 1237.240 kb on - strand, within B158DRAFT_1198 at 1237.384 kb on - strand, within B158DRAFT_1198 at 1237.395 kb on + strand, within B158DRAFT_1198 at 1237.489 kb on - strand, within B158DRAFT_1198 at 1237.489 kb on - strand, within B158DRAFT_1198 at 1237.572 kb on + strand, within B158DRAFT_1198 at 1237.638 kb on - strand, within B158DRAFT_1198 at 1237.711 kb on + strand, within B158DRAFT_1198 at 1237.732 kb on + strand, within B158DRAFT_1198 at 1237.732 kb on + strand, within B158DRAFT_1198 at 1237.740 kb on - strand, within B158DRAFT_1198 at 1237.757 kb on + strand, within B158DRAFT_1198 at 1237.776 kb on - strand, within B158DRAFT_1198 at 1237.878 kb on - strand, within B158DRAFT_1198 at 1238.017 kb on + strand, within B158DRAFT_1198 at 1238.070 kb on - strand at 1238.262 kb on + strand, within B158DRAFT_1199 at 1238.591 kb on + strand at 1238.791 kb on - strand, within B158DRAFT_1200 at 1238.860 kb on + strand, within B158DRAFT_1200 at 1238.940 kb on + strand, within B158DRAFT_1200 at 1239.015 kb on - strand, within B158DRAFT_1200 at 1239.082 kb on - strand, within B158DRAFT_1200 at 1239.142 kb on + strand, within B158DRAFT_1200
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,235,940 + +0.2 1,235,940 + -0.3 1,235,973 - -1.1 1,236,028 + -0.8 1,236,034 + +0.0 1,236,046 + +0.1 1,236,129 - B158DRAFT_1197 0.13 +0.4 1,236,167 - B158DRAFT_1197 0.17 -0.7 1,236,174 + B158DRAFT_1197 0.18 -1.0 1,236,174 + B158DRAFT_1197 0.18 +0.2 1,236,177 - B158DRAFT_1197 0.19 -1.0 1,236,177 - B158DRAFT_1197 0.19 -0.7 1,236,182 - B158DRAFT_1197 0.19 -0.7 1,236,184 + B158DRAFT_1197 0.19 -0.1 1,236,191 + B158DRAFT_1197 0.20 -0.4 1,236,191 + B158DRAFT_1197 0.20 -0.0 1,236,204 + B158DRAFT_1197 0.22 -0.5 1,236,284 + B158DRAFT_1197 0.31 +0.1 1,236,375 + B158DRAFT_1197 0.42 -0.6 1,236,375 + B158DRAFT_1197 0.42 -0.0 1,236,377 + B158DRAFT_1197 0.42 -0.3 1,236,623 - B158DRAFT_1197 0.71 +0.5 1,236,623 - B158DRAFT_1197 0.71 -1.0 1,236,623 - B158DRAFT_1197 0.71 +0.3 1,236,623 - B158DRAFT_1197 0.71 -0.1 1,236,689 - B158DRAFT_1197 0.79 +0.1 1,236,691 + B158DRAFT_1197 0.79 -0.5 1,236,698 - B158DRAFT_1197 0.80 +0.1 1,236,706 - B158DRAFT_1197 0.81 +0.1 1,236,708 + B158DRAFT_1197 0.81 -0.1 1,236,708 + B158DRAFT_1197 0.81 -0.2 1,236,708 + B158DRAFT_1197 0.81 -0.6 1,236,716 - B158DRAFT_1197 0.82 -0.4 1,237,035 + B158DRAFT_1198 0.13 -0.8 1,237,074 - B158DRAFT_1198 0.16 -0.0 1,237,141 + B158DRAFT_1198 0.21 -0.9 1,237,185 + B158DRAFT_1198 0.25 -0.2 1,237,240 - B158DRAFT_1198 0.29 +0.4 1,237,384 - B158DRAFT_1198 0.40 +0.1 1,237,395 + B158DRAFT_1198 0.41 -0.1 1,237,489 - B158DRAFT_1198 0.48 -0.4 1,237,489 - B158DRAFT_1198 0.48 -0.2 1,237,572 + B158DRAFT_1198 0.54 +0.1 1,237,638 - B158DRAFT_1198 0.59 -0.0 1,237,711 + B158DRAFT_1198 0.65 +0.8 1,237,732 + B158DRAFT_1198 0.67 +0.1 1,237,732 + B158DRAFT_1198 0.67 -0.3 1,237,740 - B158DRAFT_1198 0.67 +0.1 1,237,757 + B158DRAFT_1198 0.69 -0.5 1,237,776 - B158DRAFT_1198 0.70 -0.1 1,237,878 - B158DRAFT_1198 0.78 +0.7 1,238,017 + B158DRAFT_1198 0.88 +0.6 1,238,070 - +0.1 1,238,262 + B158DRAFT_1199 0.17 -1.6 1,238,591 + +0.2 1,238,791 - B158DRAFT_1200 0.18 +0.2 1,238,860 + B158DRAFT_1200 0.23 -0.0 1,238,940 + B158DRAFT_1200 0.29 -0.2 1,239,015 - B158DRAFT_1200 0.34 +0.3 1,239,082 - B158DRAFT_1200 0.39 -1.4 1,239,142 + B158DRAFT_1200 0.43 +0.1
Or see this region's nucleotide sequence