Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0954

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0953 and B158DRAFT_0954 are separated by 216 nucleotidesB158DRAFT_0954 and B158DRAFT_0955 are separated by 1 nucleotides B158DRAFT_0953: B158DRAFT_0953 - K+-dependent Na+/Ca+ exchanger related-protein, at 981,178 to 982,146 _0953 B158DRAFT_0954: B158DRAFT_0954 - diguanylate cyclase (GGDEF) domain, at 982,363 to 983,769 _0954 B158DRAFT_0955: B158DRAFT_0955 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 983,771 to 986,338 _0955 Position (kb) 982 983 984Strain fitness (log2 ratio) -1 0 1at 981.398 kb on + strand, within B158DRAFT_0953at 981.398 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.408 kb on + strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.430 kb on - strand, within B158DRAFT_0953at 981.446 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.587 kb on - strand, within B158DRAFT_0953at 981.617 kb on + strand, within B158DRAFT_0953at 981.654 kb on - strand, within B158DRAFT_0953at 981.727 kb on - strand, within B158DRAFT_0953at 981.778 kb on + strand, within B158DRAFT_0953at 981.812 kb on - strand, within B158DRAFT_0953at 981.874 kb on + strand, within B158DRAFT_0953at 981.882 kb on - strand, within B158DRAFT_0953at 981.883 kb on + strand, within B158DRAFT_0953at 981.929 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.942 kb on - strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.955 kb on + strand, within B158DRAFT_0953at 981.958 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 982.051 kb on - strandat 982.143 kb on + strandat 982.151 kb on - strandat 982.167 kb on - strandat 982.283 kb on - strandat 982.301 kb on + strandat 982.386 kb on - strandat 982.390 kb on + strandat 982.419 kb on - strandat 982.507 kb on + strand, within B158DRAFT_0954at 982.514 kb on + strand, within B158DRAFT_0954at 982.515 kb on - strand, within B158DRAFT_0954at 982.548 kb on + strand, within B158DRAFT_0954at 982.556 kb on - strand, within B158DRAFT_0954at 982.647 kb on + strand, within B158DRAFT_0954at 982.710 kb on + strand, within B158DRAFT_0954at 982.729 kb on - strand, within B158DRAFT_0954at 982.792 kb on - strand, within B158DRAFT_0954at 982.802 kb on - strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.937 kb on - strand, within B158DRAFT_0954at 982.972 kb on + strand, within B158DRAFT_0954at 983.004 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.027 kb on - strand, within B158DRAFT_0954at 983.064 kb on - strand, within B158DRAFT_0954at 983.082 kb on - strand, within B158DRAFT_0954at 983.116 kb on - strand, within B158DRAFT_0954at 983.227 kb on + strand, within B158DRAFT_0954at 983.285 kb on - strand, within B158DRAFT_0954at 983.638 kb on - strandat 983.644 kb on - strandat 983.652 kb on + strandat 983.652 kb on + strandat 983.654 kb on - strandat 983.660 kb on - strandat 983.710 kb on + strandat 983.783 kb on + strandat 984.015 kb on + strandat 984.154 kb on - strand, within B158DRAFT_0955at 984.154 kb on - strand, within B158DRAFT_0955at 984.154 kb on - strand, within B158DRAFT_0955at 984.156 kb on + strand, within B158DRAFT_0955at 984.164 kb on - strand, within B158DRAFT_0955at 984.172 kb on + strand, within B158DRAFT_0955at 984.172 kb on + strand, within B158DRAFT_0955at 984.180 kb on - strand, within B158DRAFT_0955at 984.207 kb on - strand, within B158DRAFT_0955at 984.255 kb on + strand, within B158DRAFT_0955at 984.308 kb on - strand, within B158DRAFT_0955at 984.309 kb on - strand, within B158DRAFT_0955at 984.310 kb on - strand, within B158DRAFT_0955at 984.310 kb on - strand, within B158DRAFT_0955at 984.515 kb on + strand, within B158DRAFT_0955at 984.522 kb on + strand, within B158DRAFT_0955at 984.534 kb on + strand, within B158DRAFT_0955at 984.566 kb on - strand, within B158DRAFT_0955at 984.663 kb on + strand, within B158DRAFT_0955at 984.752 kb on + strand, within B158DRAFT_0955at 984.752 kb on + strand, within B158DRAFT_0955at 984.756 kb on + strand, within B158DRAFT_0955

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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981,398 + B158DRAFT_0953 0.23 +0.9
981,398 - B158DRAFT_0953 0.23 -0.2
981,406 - B158DRAFT_0953 0.24 +0.4
981,406 - B158DRAFT_0953 0.24 +0.3
981,408 + B158DRAFT_0953 0.24 -0.5
981,416 - B158DRAFT_0953 0.25 +0.5
981,416 - B158DRAFT_0953 0.25 -0.1
981,416 - B158DRAFT_0953 0.25 -0.2
981,416 - B158DRAFT_0953 0.25 -0.2
981,430 - B158DRAFT_0953 0.26 +0.1
981,446 - B158DRAFT_0953 0.28 -0.4
981,545 - B158DRAFT_0953 0.38 -0.2
981,545 - B158DRAFT_0953 0.38 +0.0
981,547 - B158DRAFT_0953 0.38 -0.1
981,547 - B158DRAFT_0953 0.38 -1.0
981,566 + B158DRAFT_0953 0.40 +0.0
981,566 + B158DRAFT_0953 0.40 +1.1
981,566 + B158DRAFT_0953 0.40 -1.2
981,566 + B158DRAFT_0953 0.40 +0.1
981,566 + B158DRAFT_0953 0.40 -0.1
981,579 + B158DRAFT_0953 0.41 -0.0
981,579 + B158DRAFT_0953 0.41 -0.2
981,587 - B158DRAFT_0953 0.42 +0.3
981,617 + B158DRAFT_0953 0.45 -0.3
981,654 - B158DRAFT_0953 0.49 -1.1
981,727 - B158DRAFT_0953 0.57 +0.3
981,778 + B158DRAFT_0953 0.62 +0.2
981,812 - B158DRAFT_0953 0.65 +1.1
981,874 + B158DRAFT_0953 0.72 -0.3
981,882 - B158DRAFT_0953 0.73 -0.4
981,883 + B158DRAFT_0953 0.73 -0.3
981,929 + B158DRAFT_0953 0.78 +1.4
981,934 + B158DRAFT_0953 0.78 -0.2
981,934 + B158DRAFT_0953 0.78 -0.4
981,934 + B158DRAFT_0953 0.78 +0.2
981,942 - B158DRAFT_0953 0.79 -0.1
981,950 + B158DRAFT_0953 0.80 +0.2
981,950 + B158DRAFT_0953 0.80 -0.2
981,955 + B158DRAFT_0953 0.80 +0.0
981,958 - B158DRAFT_0953 0.80 -1.7
981,963 - B158DRAFT_0953 0.81 -0.7
981,963 - B158DRAFT_0953 0.81 +0.2
982,051 - -0.8
982,143 + -0.5
982,151 - -0.3
982,167 - -0.3
982,283 - -0.1
982,301 + -0.0
982,386 - -0.8
982,390 + +1.0
982,419 - -0.0
982,507 + B158DRAFT_0954 0.10 -0.7
982,514 + B158DRAFT_0954 0.11 -0.2
982,515 - B158DRAFT_0954 0.11 -1.0
982,548 + B158DRAFT_0954 0.13 +0.2
982,556 - B158DRAFT_0954 0.14 -1.7
982,647 + B158DRAFT_0954 0.20 -0.2
982,710 + B158DRAFT_0954 0.25 -0.7
982,729 - B158DRAFT_0954 0.26 -0.3
982,792 - B158DRAFT_0954 0.30 -1.0
982,802 - B158DRAFT_0954 0.31 +0.1
982,807 + B158DRAFT_0954 0.32 -0.2
982,807 + B158DRAFT_0954 0.32 +0.3
982,807 + B158DRAFT_0954 0.32 -0.1
982,807 + B158DRAFT_0954 0.32 -0.1
982,937 - B158DRAFT_0954 0.41 +0.6
982,972 + B158DRAFT_0954 0.43 -0.9
983,004 + B158DRAFT_0954 0.46 +0.3
983,009 + B158DRAFT_0954 0.46 +0.3
983,009 + B158DRAFT_0954 0.46 -0.9
983,009 + B158DRAFT_0954 0.46 +0.4
983,009 + B158DRAFT_0954 0.46 -0.2
983,017 - B158DRAFT_0954 0.46 +0.5
983,017 - B158DRAFT_0954 0.46 -0.2
983,017 - B158DRAFT_0954 0.46 -0.6
983,027 - B158DRAFT_0954 0.47 -0.5
983,064 - B158DRAFT_0954 0.50 -0.2
983,082 - B158DRAFT_0954 0.51 +0.0
983,116 - B158DRAFT_0954 0.54 -0.1
983,227 + B158DRAFT_0954 0.61 -0.2
983,285 - B158DRAFT_0954 0.66 -0.7
983,638 - -0.2
983,644 - +0.2
983,652 + -0.0
983,652 + -0.1
983,654 - -0.0
983,660 - -0.1
983,710 + -0.3
983,783 + -0.1
984,015 + -0.2
984,154 - B158DRAFT_0955 0.15 +1.7
984,154 - B158DRAFT_0955 0.15 +0.1
984,154 - B158DRAFT_0955 0.15 +0.0
984,156 + B158DRAFT_0955 0.15 +0.1
984,164 - B158DRAFT_0955 0.15 -0.3
984,172 + B158DRAFT_0955 0.16 +0.0
984,172 + B158DRAFT_0955 0.16 -0.1
984,180 - B158DRAFT_0955 0.16 -0.1
984,207 - B158DRAFT_0955 0.17 -0.4
984,255 + B158DRAFT_0955 0.19 +1.1
984,308 - B158DRAFT_0955 0.21 -0.8
984,309 - B158DRAFT_0955 0.21 -0.4
984,310 - B158DRAFT_0955 0.21 -0.3
984,310 - B158DRAFT_0955 0.21 -0.5
984,515 + B158DRAFT_0955 0.29 -0.1
984,522 + B158DRAFT_0955 0.29 +0.3
984,534 + B158DRAFT_0955 0.30 +0.3
984,566 - B158DRAFT_0955 0.31 -0.1
984,663 + B158DRAFT_0955 0.35 -0.4
984,752 + B158DRAFT_0955 0.38 -0.5
984,752 + B158DRAFT_0955 0.38 -0.2
984,756 + B158DRAFT_0955 0.38 -1.4

Or see this region's nucleotide sequence