Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0859

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0858 and B158DRAFT_0859 overlap by 4 nucleotidesB158DRAFT_0859 and B158DRAFT_0860 are separated by 164 nucleotidesB158DRAFT_0860 and B158DRAFT_0861 are separated by 85 nucleotides B158DRAFT_0858: B158DRAFT_0858 - Na+/H+ antiporter, at 876,748 to 878,130 _0858 B158DRAFT_0859: B158DRAFT_0859 - putative efflux protein, MATE family, at 878,127 to 879,455 _0859 B158DRAFT_0860: B158DRAFT_0860 - Sensors of blue-light using FAD., at 879,620 to 880,051 _0860 B158DRAFT_0861: B158DRAFT_0861 - Cytochrome b, at 880,137 to 880,691 _0861 Position (kb) 878 879 880Strain fitness (log2 ratio) -3 -2 -1 0 1at 877.145 kb on + strand, within B158DRAFT_0858at 877.145 kb on + strand, within B158DRAFT_0858at 877.145 kb on + strand, within B158DRAFT_0858at 877.148 kb on - strand, within B158DRAFT_0858at 877.153 kb on - strand, within B158DRAFT_0858at 877.153 kb on - strand, within B158DRAFT_0858at 877.153 kb on - strand, within B158DRAFT_0858at 877.154 kb on - strand, within B158DRAFT_0858at 877.172 kb on + strand, within B158DRAFT_0858at 877.219 kb on + strand, within B158DRAFT_0858at 877.233 kb on + strand, within B158DRAFT_0858at 877.275 kb on + strand, within B158DRAFT_0858at 877.298 kb on - strand, within B158DRAFT_0858at 877.298 kb on - strand, within B158DRAFT_0858at 877.298 kb on - strand, within B158DRAFT_0858at 877.340 kb on + strand, within B158DRAFT_0858at 877.394 kb on + strand, within B158DRAFT_0858at 877.484 kb on - strand, within B158DRAFT_0858at 877.484 kb on - strand, within B158DRAFT_0858at 877.486 kb on - strand, within B158DRAFT_0858at 877.491 kb on + strand, within B158DRAFT_0858at 877.528 kb on - strand, within B158DRAFT_0858at 877.616 kb on + strand, within B158DRAFT_0858at 877.616 kb on + strand, within B158DRAFT_0858at 877.621 kb on + strand, within B158DRAFT_0858at 877.621 kb on + strand, within B158DRAFT_0858at 877.623 kb on + strand, within B158DRAFT_0858at 877.624 kb on - strand, within B158DRAFT_0858at 877.624 kb on - strand, within B158DRAFT_0858at 877.624 kb on - strand, within B158DRAFT_0858at 877.629 kb on - strand, within B158DRAFT_0858at 877.645 kb on + strand, within B158DRAFT_0858at 877.645 kb on + strand, within B158DRAFT_0858at 877.645 kb on - strand, within B158DRAFT_0858at 877.653 kb on - strand, within B158DRAFT_0858at 877.660 kb on + strand, within B158DRAFT_0858at 877.722 kb on - strand, within B158DRAFT_0858at 877.805 kb on + strand, within B158DRAFT_0858at 877.805 kb on + strand, within B158DRAFT_0858at 877.805 kb on + strand, within B158DRAFT_0858at 877.831 kb on + strand, within B158DRAFT_0858at 877.839 kb on - strand, within B158DRAFT_0858at 877.839 kb on - strand, within B158DRAFT_0858at 877.841 kb on + strand, within B158DRAFT_0858at 877.841 kb on - strand, within B158DRAFT_0858at 877.883 kb on + strand, within B158DRAFT_0858at 877.883 kb on + strand, within B158DRAFT_0858at 877.931 kb on + strand, within B158DRAFT_0858at 877.949 kb on + strand, within B158DRAFT_0858at 877.957 kb on - strand, within B158DRAFT_0858at 877.957 kb on - strand, within B158DRAFT_0858at 877.962 kb on - strand, within B158DRAFT_0858at 877.976 kb on + strand, within B158DRAFT_0858at 877.976 kb on + strand, within B158DRAFT_0858at 877.976 kb on + strand, within B158DRAFT_0858at 877.976 kb on + strand, within B158DRAFT_0858at 877.981 kb on + strand, within B158DRAFT_0858at 877.984 kb on - strand, within B158DRAFT_0858at 877.984 kb on - strand, within B158DRAFT_0858at 877.984 kb on - strand, within B158DRAFT_0858at 878.012 kb on + strandat 878.064 kb on - strandat 878.095 kb on + strandat 878.095 kb on + strandat 878.095 kb on + strandat 878.097 kb on + strandat 878.104 kb on + strandat 878.154 kb on - strandat 878.162 kb on + strandat 878.189 kb on + strandat 878.206 kb on + strandat 878.310 kb on - strand, within B158DRAFT_0859at 878.327 kb on - strand, within B158DRAFT_0859at 878.529 kb on - strand, within B158DRAFT_0859at 878.554 kb on + strand, within B158DRAFT_0859at 878.564 kb on + strand, within B158DRAFT_0859at 878.595 kb on + strand, within B158DRAFT_0859at 878.600 kb on + strand, within B158DRAFT_0859at 878.605 kb on + strand, within B158DRAFT_0859at 878.668 kb on + strand, within B158DRAFT_0859at 878.676 kb on - strand, within B158DRAFT_0859at 878.699 kb on - strand, within B158DRAFT_0859at 878.887 kb on + strand, within B158DRAFT_0859at 878.927 kb on + strand, within B158DRAFT_0859at 878.927 kb on + strand, within B158DRAFT_0859at 878.935 kb on - strand, within B158DRAFT_0859at 878.953 kb on + strand, within B158DRAFT_0859at 878.963 kb on - strand, within B158DRAFT_0859at 878.963 kb on - strand, within B158DRAFT_0859at 879.002 kb on - strand, within B158DRAFT_0859at 879.235 kb on - strand, within B158DRAFT_0859at 879.342 kb on - strandat 879.342 kb on - strandat 879.342 kb on - strandat 879.342 kb on - strandat 879.342 kb on - strandat 879.353 kb on + strandat 879.354 kb on - strandat 879.411 kb on - strandat 879.453 kb on - strandat 879.497 kb on + strandat 879.516 kb on + strandat 879.517 kb on - strandat 879.519 kb on + strandat 879.524 kb on - strandat 879.524 kb on - strandat 879.526 kb on + strandat 879.526 kb on + strandat 879.526 kb on + strandat 879.526 kb on + strandat 879.526 kb on + strandat 879.531 kb on + strandat 879.531 kb on + strandat 879.531 kb on + strandat 879.531 kb on + strandat 879.531 kb on + strandat 879.531 kb on + strandat 879.534 kb on - strandat 879.534 kb on - strandat 879.534 kb on - strandat 879.534 kb on - strandat 879.534 kb on - strandat 879.539 kb on - strandat 879.573 kb on + strandat 879.578 kb on + strandat 879.586 kb on - strandat 879.651 kb on + strandat 879.693 kb on - strand, within B158DRAFT_0860at 879.796 kb on + strand, within B158DRAFT_0860at 879.804 kb on + strand, within B158DRAFT_0860at 879.804 kb on - strand, within B158DRAFT_0860at 879.804 kb on - strand, within B158DRAFT_0860at 879.812 kb on - strand, within B158DRAFT_0860at 879.835 kb on - strand, within B158DRAFT_0860at 879.926 kb on - strand, within B158DRAFT_0860at 879.936 kb on - strand, within B158DRAFT_0860at 879.936 kb on - strand, within B158DRAFT_0860at 879.958 kb on + strand, within B158DRAFT_0860at 879.966 kb on - strand, within B158DRAFT_0860at 879.966 kb on - strand, within B158DRAFT_0860at 879.997 kb on + strand, within B158DRAFT_0860at 880.009 kb on + strandat 880.012 kb on - strandat 880.047 kb on + strandat 880.080 kb on - strandat 880.102 kb on + strandat 880.102 kb on + strandat 880.102 kb on + strandat 880.102 kb on + strandat 880.102 kb on + strandat 880.109 kb on - strandat 880.110 kb on - strandat 880.110 kb on - strandat 880.112 kb on + strandat 880.112 kb on + strandat 880.112 kb on + strandat 880.120 kb on - strandat 880.150 kb on + strandat 880.158 kb on - strandat 880.188 kb on + strandat 880.188 kb on - strandat 880.188 kb on - strandat 880.238 kb on + strand, within B158DRAFT_0861at 880.250 kb on + strand, within B158DRAFT_0861at 880.270 kb on + strand, within B158DRAFT_0861at 880.270 kb on + strand, within B158DRAFT_0861at 880.270 kb on + strand, within B158DRAFT_0861at 880.275 kb on + strand, within B158DRAFT_0861at 880.278 kb on - strand, within B158DRAFT_0861at 880.286 kb on + strand, within B158DRAFT_0861at 880.288 kb on - strand, within B158DRAFT_0861at 880.291 kb on + strand, within B158DRAFT_0861at 880.291 kb on + strand, within B158DRAFT_0861at 880.291 kb on + strand, within B158DRAFT_0861at 880.294 kb on - strand, within B158DRAFT_0861at 880.294 kb on - strand, within B158DRAFT_0861at 880.304 kb on - strand, within B158DRAFT_0861at 880.304 kb on - strand, within B158DRAFT_0861at 880.304 kb on - strand, within B158DRAFT_0861at 880.354 kb on + strand, within B158DRAFT_0861at 880.354 kb on + strand, within B158DRAFT_0861at 880.362 kb on - strand, within B158DRAFT_0861at 880.364 kb on + strand, within B158DRAFT_0861at 880.364 kb on + strand, within B158DRAFT_0861at 880.364 kb on + strand, within B158DRAFT_0861at 880.380 kb on + strand, within B158DRAFT_0861

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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877,145 + B158DRAFT_0858 0.29 +0.1
877,145 + B158DRAFT_0858 0.29 +0.3
877,145 + B158DRAFT_0858 0.29 -0.1
877,148 - B158DRAFT_0858 0.29 -0.2
877,153 - B158DRAFT_0858 0.29 -0.9
877,153 - B158DRAFT_0858 0.29 +0.0
877,153 - B158DRAFT_0858 0.29 -0.5
877,154 - B158DRAFT_0858 0.29 +0.3
877,172 + B158DRAFT_0858 0.31 -1.7
877,219 + B158DRAFT_0858 0.34 -0.6
877,233 + B158DRAFT_0858 0.35 +0.0
877,275 + B158DRAFT_0858 0.38 -0.3
877,298 - B158DRAFT_0858 0.40 -1.1
877,298 - B158DRAFT_0858 0.40 -0.3
877,298 - B158DRAFT_0858 0.40 -0.4
877,340 + B158DRAFT_0858 0.43 -0.1
877,394 + B158DRAFT_0858 0.47 -0.8
877,484 - B158DRAFT_0858 0.53 +0.5
877,484 - B158DRAFT_0858 0.53 -0.6
877,486 - B158DRAFT_0858 0.53 +0.5
877,491 + B158DRAFT_0858 0.54 -0.3
877,528 - B158DRAFT_0858 0.56 -0.1
877,616 + B158DRAFT_0858 0.63 -0.2
877,616 + B158DRAFT_0858 0.63 +0.1
877,621 + B158DRAFT_0858 0.63 -0.3
877,621 + B158DRAFT_0858 0.63 -0.2
877,623 + B158DRAFT_0858 0.63 +0.0
877,624 - B158DRAFT_0858 0.63 -0.7
877,624 - B158DRAFT_0858 0.63 -0.6
877,624 - B158DRAFT_0858 0.63 +0.2
877,629 - B158DRAFT_0858 0.64 +0.3
877,645 + B158DRAFT_0858 0.65 -0.7
877,645 + B158DRAFT_0858 0.65 -0.1
877,645 - B158DRAFT_0858 0.65 -0.6
877,653 - B158DRAFT_0858 0.65 -0.7
877,660 + B158DRAFT_0858 0.66 -0.2
877,722 - B158DRAFT_0858 0.70 -0.5
877,805 + B158DRAFT_0858 0.76 -1.3
877,805 + B158DRAFT_0858 0.76 -0.2
877,805 + B158DRAFT_0858 0.76 +0.3
877,831 + B158DRAFT_0858 0.78 -0.3
877,839 - B158DRAFT_0858 0.79 -0.3
877,839 - B158DRAFT_0858 0.79 -1.2
877,841 + B158DRAFT_0858 0.79 -0.6
877,841 - B158DRAFT_0858 0.79 +0.7
877,883 + B158DRAFT_0858 0.82 -1.3
877,883 + B158DRAFT_0858 0.82 -1.0
877,931 + B158DRAFT_0858 0.86 -0.9
877,949 + B158DRAFT_0858 0.87 +0.3
877,957 - B158DRAFT_0858 0.87 +0.3
877,957 - B158DRAFT_0858 0.87 +0.1
877,962 - B158DRAFT_0858 0.88 +0.7
877,976 + B158DRAFT_0858 0.89 -0.0
877,976 + B158DRAFT_0858 0.89 +0.0
877,976 + B158DRAFT_0858 0.89 -0.3
877,976 + B158DRAFT_0858 0.89 -0.1
877,981 + B158DRAFT_0858 0.89 -0.3
877,984 - B158DRAFT_0858 0.89 +0.0
877,984 - B158DRAFT_0858 0.89 -1.1
877,984 - B158DRAFT_0858 0.89 -1.0
878,012 + -0.3
878,064 - +0.5
878,095 + -0.3
878,095 + -1.6
878,095 + -0.6
878,097 + +0.5
878,104 + -0.2
878,154 - -0.7
878,162 + -1.3
878,189 + -0.5
878,206 + -2.8
878,310 - B158DRAFT_0859 0.14 +1.1
878,327 - B158DRAFT_0859 0.15 -1.2
878,529 - B158DRAFT_0859 0.30 -0.2
878,554 + B158DRAFT_0859 0.32 +0.1
878,564 + B158DRAFT_0859 0.33 -1.7
878,595 + B158DRAFT_0859 0.35 +0.5
878,600 + B158DRAFT_0859 0.36 -2.3
878,605 + B158DRAFT_0859 0.36 -1.5
878,668 + B158DRAFT_0859 0.41 -0.7
878,676 - B158DRAFT_0859 0.41 -1.5
878,699 - B158DRAFT_0859 0.43 -0.2
878,887 + B158DRAFT_0859 0.57 -0.5
878,927 + B158DRAFT_0859 0.60 -0.9
878,927 + B158DRAFT_0859 0.60 -0.7
878,935 - B158DRAFT_0859 0.61 -1.6
878,953 + B158DRAFT_0859 0.62 -2.1
878,963 - B158DRAFT_0859 0.63 -1.6
878,963 - B158DRAFT_0859 0.63 -1.1
879,002 - B158DRAFT_0859 0.66 -1.1
879,235 - B158DRAFT_0859 0.83 -1.1
879,342 - -1.0
879,342 - -1.0
879,342 - -1.2
879,342 - -0.7
879,342 - +0.1
879,353 + -0.2
879,354 - +0.1
879,411 - -2.4
879,453 - +0.1
879,497 + +0.9
879,516 + -0.3
879,517 - -0.1
879,519 + +0.3
879,524 - +0.2
879,524 - -0.7
879,526 + +0.3
879,526 + +0.2
879,526 + +0.7
879,526 + +0.2
879,526 + +0.8
879,531 + -0.3
879,531 + +1.4
879,531 + -0.5
879,531 + -1.2
879,531 + +1.1
879,531 + -0.8
879,534 - +0.0
879,534 - +0.2
879,534 - -0.1
879,534 - +0.6
879,534 - -0.5
879,539 - -0.6
879,573 + +0.5
879,578 + -0.5
879,586 - -0.6
879,651 + -1.1
879,693 - B158DRAFT_0860 0.17 -0.5
879,796 + B158DRAFT_0860 0.41 +0.6
879,804 + B158DRAFT_0860 0.43 -0.2
879,804 - B158DRAFT_0860 0.43 +0.1
879,804 - B158DRAFT_0860 0.43 +0.2
879,812 - B158DRAFT_0860 0.44 -0.5
879,835 - B158DRAFT_0860 0.50 +0.0
879,926 - B158DRAFT_0860 0.71 -0.9
879,936 - B158DRAFT_0860 0.73 -0.5
879,936 - B158DRAFT_0860 0.73 -0.4
879,958 + B158DRAFT_0860 0.78 +0.2
879,966 - B158DRAFT_0860 0.80 +0.3
879,966 - B158DRAFT_0860 0.80 -0.0
879,997 + B158DRAFT_0860 0.87 +1.5
880,009 + +1.0
880,012 - -0.5
880,047 + +0.1
880,080 - -0.0
880,102 + -0.4
880,102 + -0.8
880,102 + -0.3
880,102 + -0.4
880,102 + +0.6
880,109 - -0.1
880,110 - +0.5
880,110 - -0.6
880,112 + -0.0
880,112 + -0.8
880,112 + -0.1
880,120 - -2.0
880,150 + -0.0
880,158 - +0.9
880,188 + -0.4
880,188 - -0.6
880,188 - +0.1
880,238 + B158DRAFT_0861 0.18 +0.5
880,250 + B158DRAFT_0861 0.20 +0.7
880,270 + B158DRAFT_0861 0.24 -0.3
880,270 + B158DRAFT_0861 0.24 -0.1
880,270 + B158DRAFT_0861 0.24 -0.2
880,275 + B158DRAFT_0861 0.25 -0.3
880,278 - B158DRAFT_0861 0.25 +0.1
880,286 + B158DRAFT_0861 0.27 -0.4
880,288 - B158DRAFT_0861 0.27 -0.2
880,291 + B158DRAFT_0861 0.28 +0.1
880,291 + B158DRAFT_0861 0.28 -0.7
880,291 + B158DRAFT_0861 0.28 +0.7
880,294 - B158DRAFT_0861 0.28 -2.2
880,294 - B158DRAFT_0861 0.28 +0.0
880,304 - B158DRAFT_0861 0.30 +0.5
880,304 - B158DRAFT_0861 0.30 +0.3
880,304 - B158DRAFT_0861 0.30 -0.4
880,354 + B158DRAFT_0861 0.39 -0.1
880,354 + B158DRAFT_0861 0.39 +0.8
880,362 - B158DRAFT_0861 0.41 -0.6
880,364 + B158DRAFT_0861 0.41 -0.7
880,364 + B158DRAFT_0861 0.41 +0.3
880,364 + B158DRAFT_0861 0.41 -0.1
880,380 + B158DRAFT_0861 0.44 -0.2

Or see this region's nucleotide sequence