Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0266

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0264 and B158DRAFT_0265 are separated by 365 nucleotidesB158DRAFT_0265 and B158DRAFT_0266 are separated by 6 nucleotidesB158DRAFT_0266 and B158DRAFT_0267 are separated by 44 nucleotidesB158DRAFT_0267 and B158DRAFT_0268 are separated by 160 nucleotides B158DRAFT_0264: B158DRAFT_0264 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 269,775 to 270,410 _0264 B158DRAFT_0265: B158DRAFT_0265 - Predicted endonuclease containing a URI domain, at 270,776 to 271,084 _0265 B158DRAFT_0266: B158DRAFT_0266 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 271,091 to 271,951 _0266 B158DRAFT_0267: B158DRAFT_0267 - ribulose-phosphate 3-epimerase, at 271,996 to 272,673 _0267 B158DRAFT_0268: B158DRAFT_0268 - Protein of unknown function (DUF3050)., at 272,834 to 273,577 _0268 Position (kb) 271 272Strain fitness (log2 ratio) -2 -1 0 1 2at 270.150 kb on - strand, within B158DRAFT_0264at 270.259 kb on - strand, within B158DRAFT_0264at 270.264 kb on - strand, within B158DRAFT_0264at 270.272 kb on + strand, within B158DRAFT_0264at 270.272 kb on + strand, within B158DRAFT_0264at 270.272 kb on + strand, within B158DRAFT_0264at 270.280 kb on - strand, within B158DRAFT_0264at 270.280 kb on - strand, within B158DRAFT_0264at 270.334 kb on - strand, within B158DRAFT_0264at 270.676 kb on + strandat 270.676 kb on + strandat 270.684 kb on - strandat 270.684 kb on - strandat 270.712 kb on - strandat 270.828 kb on + strand, within B158DRAFT_0265at 270.828 kb on + strand, within B158DRAFT_0265at 270.836 kb on - strand, within B158DRAFT_0265at 270.893 kb on + strand, within B158DRAFT_0265at 271.071 kb on - strandat 271.079 kb on + strandat 271.089 kb on + strandat 271.203 kb on + strand, within B158DRAFT_0266at 271.251 kb on + strand, within B158DRAFT_0266at 271.259 kb on + strand, within B158DRAFT_0266at 271.259 kb on - strand, within B158DRAFT_0266at 271.330 kb on - strand, within B158DRAFT_0266at 271.368 kb on - strand, within B158DRAFT_0266at 271.395 kb on - strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.458 kb on + strand, within B158DRAFT_0266at 271.458 kb on + strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.466 kb on - strand, within B158DRAFT_0266at 271.466 kb on - strand, within B158DRAFT_0266at 271.633 kb on - strand, within B158DRAFT_0266at 271.633 kb on - strand, within B158DRAFT_0266at 271.743 kb on + strand, within B158DRAFT_0266at 271.799 kb on + strand, within B158DRAFT_0266at 271.873 kb on - strandat 272.001 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.756 kb on - strandat 272.767 kb on - strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.793 kb on - strandat 272.793 kb on - strandat 272.839 kb on - strandat 272.839 kb on - strandat 272.841 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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270,150 - B158DRAFT_0264 0.59 +0.1
270,259 - B158DRAFT_0264 0.76 -0.2
270,264 - B158DRAFT_0264 0.77 -0.1
270,272 + B158DRAFT_0264 0.78 +0.5
270,272 + B158DRAFT_0264 0.78 -0.4
270,272 + B158DRAFT_0264 0.78 +0.9
270,280 - B158DRAFT_0264 0.79 -0.5
270,280 - B158DRAFT_0264 0.79 +1.5
270,334 - B158DRAFT_0264 0.88 -0.0
270,676 + -0.0
270,676 + +0.1
270,684 - -1.1
270,684 - -0.4
270,712 - -1.3
270,828 + B158DRAFT_0265 0.17 -1.3
270,828 + B158DRAFT_0265 0.17 -0.1
270,836 - B158DRAFT_0265 0.19 -0.1
270,893 + B158DRAFT_0265 0.38 -0.8
271,071 - -0.5
271,079 + -0.1
271,089 + +0.2
271,203 + B158DRAFT_0266 0.13 -0.1
271,251 + B158DRAFT_0266 0.19 +0.4
271,259 + B158DRAFT_0266 0.20 +0.3
271,259 - B158DRAFT_0266 0.20 +0.3
271,330 - B158DRAFT_0266 0.28 -0.0
271,368 - B158DRAFT_0266 0.32 -0.1
271,395 - B158DRAFT_0266 0.35 +1.1
271,453 + B158DRAFT_0266 0.42 +0.3
271,453 + B158DRAFT_0266 0.42 +0.6
271,453 + B158DRAFT_0266 0.42 +0.4
271,453 + B158DRAFT_0266 0.42 +0.5
271,453 + B158DRAFT_0266 0.42 -0.8
271,453 + B158DRAFT_0266 0.42 +0.4
271,453 + B158DRAFT_0266 0.42 -0.0
271,458 + B158DRAFT_0266 0.43 +0.2
271,458 + B158DRAFT_0266 0.43 -1.0
271,461 - B158DRAFT_0266 0.43 -0.4
271,461 - B158DRAFT_0266 0.43 +0.2
271,461 - B158DRAFT_0266 0.43 -0.1
271,461 - B158DRAFT_0266 0.43 -0.0
271,461 - B158DRAFT_0266 0.43 -0.0
271,461 - B158DRAFT_0266 0.43 +0.4
271,461 - B158DRAFT_0266 0.43 -0.4
271,461 - B158DRAFT_0266 0.43 -0.2
271,466 - B158DRAFT_0266 0.44 +0.3
271,466 - B158DRAFT_0266 0.44 +0.1
271,633 - B158DRAFT_0266 0.63 +0.3
271,633 - B158DRAFT_0266 0.63 +1.4
271,743 + B158DRAFT_0266 0.76 +1.8
271,799 + B158DRAFT_0266 0.82 +0.1
271,873 - +0.1
272,001 - +0.1
272,701 - -2.2
272,701 - -0.6
272,701 - -1.4
272,701 - -1.3
272,701 - -1.2
272,756 - -0.6
272,767 - +0.5
272,785 + +1.1
272,785 + +0.0
272,785 + +0.1
272,785 + -0.6
272,785 + +0.1
272,793 - -0.7
272,793 - -0.3
272,839 - -0.3
272,839 - +0.2
272,841 + +1.4

Or see this region's nucleotide sequence