Experiment: m.b. Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1723 and B158DRAFT_1724 are separated by 46 nucleotides B158DRAFT_1724 and B158DRAFT_1725 are separated by 13 nucleotides B158DRAFT_1725 and B158DRAFT_1726 overlap by 1 nucleotides B158DRAFT_1726 and B158DRAFT_1727 overlap by 1 nucleotides
B158DRAFT_1723: B158DRAFT_1723 - hypothetical protein, at 1,797,700 to 1,799,004
_1723
B158DRAFT_1724: B158DRAFT_1724 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 1,799,051 to 1,799,773
_1724
B158DRAFT_1725: B158DRAFT_1725 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 1,799,787 to 1,800,536
_1725
B158DRAFT_1726: B158DRAFT_1726 - hypothetical protein, at 1,800,536 to 1,800,769
_1726
B158DRAFT_1727: B158DRAFT_1727 - ribonucleoside-triphosphate reductase class III catalytic subunit (EC 1.17.4.2), at 1,800,769 to 1,802,808
_1727
Position (kb)
1799
1800
1801 Strain fitness (log2 ratio)
-2
-1
0
1 at 1798.860 kb on + strand, within B158DRAFT_1723 at 1799.053 kb on + strand at 1799.129 kb on + strand, within B158DRAFT_1724 at 1799.129 kb on - strand, within B158DRAFT_1724 at 1799.166 kb on + strand, within B158DRAFT_1724 at 1799.166 kb on + strand, within B158DRAFT_1724 at 1799.193 kb on + strand, within B158DRAFT_1724 at 1799.201 kb on - strand, within B158DRAFT_1724 at 1799.318 kb on + strand, within B158DRAFT_1724 at 1799.364 kb on + strand, within B158DRAFT_1724 at 1799.509 kb on + strand, within B158DRAFT_1724 at 1799.524 kb on - strand, within B158DRAFT_1724 at 1799.695 kb on + strand, within B158DRAFT_1724 at 1799.805 kb on - strand at 1799.830 kb on + strand at 1799.830 kb on + strand at 1799.893 kb on + strand, within B158DRAFT_1725 at 1799.939 kb on - strand, within B158DRAFT_1725 at 1799.994 kb on + strand, within B158DRAFT_1725 at 1800.048 kb on - strand, within B158DRAFT_1725 at 1800.048 kb on - strand, within B158DRAFT_1725 at 1800.085 kb on + strand, within B158DRAFT_1725 at 1800.093 kb on - strand, within B158DRAFT_1725 at 1800.131 kb on + strand, within B158DRAFT_1725 at 1800.131 kb on - strand, within B158DRAFT_1725 at 1800.139 kb on - strand, within B158DRAFT_1725 at 1800.139 kb on - strand, within B158DRAFT_1725 at 1800.166 kb on + strand, within B158DRAFT_1725 at 1800.182 kb on + strand, within B158DRAFT_1725 at 1800.190 kb on - strand, within B158DRAFT_1725 at 1800.198 kb on + strand, within B158DRAFT_1725 at 1800.198 kb on - strand, within B158DRAFT_1725 at 1800.246 kb on + strand, within B158DRAFT_1725 at 1800.246 kb on + strand, within B158DRAFT_1725 at 1800.246 kb on + strand, within B158DRAFT_1725 at 1800.254 kb on - strand, within B158DRAFT_1725 at 1800.254 kb on - strand, within B158DRAFT_1725 at 1800.260 kb on + strand, within B158DRAFT_1725 at 1800.285 kb on - strand, within B158DRAFT_1725 at 1800.290 kb on - strand, within B158DRAFT_1725 at 1800.304 kb on + strand, within B158DRAFT_1725 at 1800.312 kb on - strand, within B158DRAFT_1725 at 1800.328 kb on + strand, within B158DRAFT_1725 at 1800.362 kb on + strand, within B158DRAFT_1725 at 1800.406 kb on + strand, within B158DRAFT_1725 at 1800.409 kb on - strand, within B158DRAFT_1725 at 1800.419 kb on - strand, within B158DRAFT_1725 at 1800.427 kb on + strand, within B158DRAFT_1725 at 1800.435 kb on - strand, within B158DRAFT_1725 at 1800.435 kb on - strand, within B158DRAFT_1725 at 1800.440 kb on - strand, within B158DRAFT_1725 at 1800.467 kb on - strand at 1800.474 kb on + strand at 1800.547 kb on + strand at 1800.556 kb on - strand at 1800.596 kb on + strand, within B158DRAFT_1726 at 1800.596 kb on + strand, within B158DRAFT_1726 at 1800.693 kb on + strand, within B158DRAFT_1726 at 1800.700 kb on + strand, within B158DRAFT_1726 at 1800.708 kb on - strand, within B158DRAFT_1726 at 1800.708 kb on - strand, within B158DRAFT_1726 at 1800.708 kb on - strand, within B158DRAFT_1726 at 1800.790 kb on + strand at 1800.819 kb on - strand at 1800.827 kb on + strand at 1800.862 kb on + strand at 1800.862 kb on + strand at 1800.867 kb on + strand at 1800.867 kb on + strand at 1800.867 kb on + strand at 1800.867 kb on + strand at 1800.870 kb on - strand at 1800.870 kb on - strand at 1800.870 kb on - strand at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.977 kb on + strand, within B158DRAFT_1727 at 1800.985 kb on - strand, within B158DRAFT_1727 at 1800.985 kb on - strand, within B158DRAFT_1727 at 1800.985 kb on - strand, within B158DRAFT_1727 at 1800.985 kb on - strand, within B158DRAFT_1727 at 1800.988 kb on + strand, within B158DRAFT_1727 at 1800.996 kb on - strand, within B158DRAFT_1727 at 1801.085 kb on + strand, within B158DRAFT_1727 at 1801.101 kb on - strand, within B158DRAFT_1727 at 1801.101 kb on - strand, within B158DRAFT_1727 at 1801.116 kb on - strand, within B158DRAFT_1727 at 1801.175 kb on - strand, within B158DRAFT_1727 at 1801.177 kb on - strand, within B158DRAFT_1727 at 1801.199 kb on - strand, within B158DRAFT_1727 at 1801.281 kb on - strand, within B158DRAFT_1727 at 1801.326 kb on - strand, within B158DRAFT_1727 at 1801.394 kb on + strand, within B158DRAFT_1727 at 1801.511 kb on + strand, within B158DRAFT_1727 at 1801.519 kb on - strand, within B158DRAFT_1727 at 1801.528 kb on - strand, within B158DRAFT_1727 at 1801.530 kb on + strand, within B158DRAFT_1727
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM remove 1,798,860 + B158DRAFT_1723 0.89 +0.1 1,799,053 + +0.2 1,799,129 + B158DRAFT_1724 0.11 -0.2 1,799,129 - B158DRAFT_1724 0.11 -0.0 1,799,166 + B158DRAFT_1724 0.16 +0.2 1,799,166 + B158DRAFT_1724 0.16 +0.1 1,799,193 + B158DRAFT_1724 0.20 -0.3 1,799,201 - B158DRAFT_1724 0.21 +0.8 1,799,318 + B158DRAFT_1724 0.37 -0.2 1,799,364 + B158DRAFT_1724 0.43 +0.2 1,799,509 + B158DRAFT_1724 0.63 +0.5 1,799,524 - B158DRAFT_1724 0.65 -0.9 1,799,695 + B158DRAFT_1724 0.89 +0.2 1,799,805 - +0.0 1,799,830 + -0.4 1,799,830 + +0.0 1,799,893 + B158DRAFT_1725 0.14 +0.7 1,799,939 - B158DRAFT_1725 0.20 +0.3 1,799,994 + B158DRAFT_1725 0.28 -0.8 1,800,048 - B158DRAFT_1725 0.35 -0.3 1,800,048 - B158DRAFT_1725 0.35 -0.2 1,800,085 + B158DRAFT_1725 0.40 -0.4 1,800,093 - B158DRAFT_1725 0.41 +0.3 1,800,131 + B158DRAFT_1725 0.46 -0.6 1,800,131 - B158DRAFT_1725 0.46 +0.5 1,800,139 - B158DRAFT_1725 0.47 -0.3 1,800,139 - B158DRAFT_1725 0.47 -0.2 1,800,166 + B158DRAFT_1725 0.51 -0.0 1,800,182 + B158DRAFT_1725 0.53 +0.1 1,800,190 - B158DRAFT_1725 0.54 -0.3 1,800,198 + B158DRAFT_1725 0.55 -0.2 1,800,198 - B158DRAFT_1725 0.55 -0.3 1,800,246 + B158DRAFT_1725 0.61 +0.9 1,800,246 + B158DRAFT_1725 0.61 -0.2 1,800,246 + B158DRAFT_1725 0.61 -0.2 1,800,254 - B158DRAFT_1725 0.62 -0.4 1,800,254 - B158DRAFT_1725 0.62 -0.3 1,800,260 + B158DRAFT_1725 0.63 +0.7 1,800,285 - B158DRAFT_1725 0.66 +0.1 1,800,290 - B158DRAFT_1725 0.67 +0.2 1,800,304 + B158DRAFT_1725 0.69 -0.4 1,800,312 - B158DRAFT_1725 0.70 -0.2 1,800,328 + B158DRAFT_1725 0.72 -0.4 1,800,362 + B158DRAFT_1725 0.77 -0.3 1,800,406 + B158DRAFT_1725 0.83 -0.6 1,800,409 - B158DRAFT_1725 0.83 +0.5 1,800,419 - B158DRAFT_1725 0.84 -2.0 1,800,427 + B158DRAFT_1725 0.85 +0.0 1,800,435 - B158DRAFT_1725 0.86 -0.1 1,800,435 - B158DRAFT_1725 0.86 +0.3 1,800,440 - B158DRAFT_1725 0.87 -0.3 1,800,467 - +0.0 1,800,474 + -0.3 1,800,547 + +0.1 1,800,556 - +0.3 1,800,596 + B158DRAFT_1726 0.26 -0.2 1,800,596 + B158DRAFT_1726 0.26 -1.7 1,800,693 + B158DRAFT_1726 0.67 +0.2 1,800,700 + B158DRAFT_1726 0.70 +0.2 1,800,708 - B158DRAFT_1726 0.74 +0.0 1,800,708 - B158DRAFT_1726 0.74 -0.7 1,800,708 - B158DRAFT_1726 0.74 -0.0 1,800,790 + +0.0 1,800,819 - +0.1 1,800,827 + +0.3 1,800,862 + +0.1 1,800,862 + +0.2 1,800,867 + -0.1 1,800,867 + -0.3 1,800,867 + -0.2 1,800,867 + -0.3 1,800,870 - -1.6 1,800,870 - -0.0 1,800,870 - +0.4 1,800,977 + B158DRAFT_1727 0.10 +0.1 1,800,977 + B158DRAFT_1727 0.10 +0.1 1,800,977 + B158DRAFT_1727 0.10 -0.6 1,800,977 + B158DRAFT_1727 0.10 +0.2 1,800,977 + B158DRAFT_1727 0.10 -0.4 1,800,977 + B158DRAFT_1727 0.10 -0.2 1,800,985 - B158DRAFT_1727 0.11 -0.1 1,800,985 - B158DRAFT_1727 0.11 +0.0 1,800,985 - B158DRAFT_1727 0.11 -0.2 1,800,985 - B158DRAFT_1727 0.11 -1.1 1,800,988 + B158DRAFT_1727 0.11 +0.5 1,800,996 - B158DRAFT_1727 0.11 -0.4 1,801,085 + B158DRAFT_1727 0.15 -0.0 1,801,101 - B158DRAFT_1727 0.16 +0.7 1,801,101 - B158DRAFT_1727 0.16 -0.0 1,801,116 - B158DRAFT_1727 0.17 -0.1 1,801,175 - B158DRAFT_1727 0.20 +0.0 1,801,177 - B158DRAFT_1727 0.20 -0.5 1,801,199 - B158DRAFT_1727 0.21 -0.2 1,801,281 - B158DRAFT_1727 0.25 -0.0 1,801,326 - B158DRAFT_1727 0.27 -0.1 1,801,394 + B158DRAFT_1727 0.31 -0.0 1,801,511 + B158DRAFT_1727 0.36 -0.7 1,801,519 - B158DRAFT_1727 0.37 +0.2 1,801,528 - B158DRAFT_1727 0.37 -0.2 1,801,530 + B158DRAFT_1727 0.37 -1.8
Or see this region's nucleotide sequence