Experiment: m.b. Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1701 and B158DRAFT_1702 are separated by 20 nucleotides B158DRAFT_1702 and B158DRAFT_1703 are separated by 20 nucleotides B158DRAFT_1703 and B158DRAFT_1704 overlap by 8 nucleotides B158DRAFT_1704 and B158DRAFT_1705 are separated by 67 nucleotides
B158DRAFT_1701: B158DRAFT_1701 - hypothetical protein, at 1,777,414 to 1,778,196
_1701
B158DRAFT_1702: B158DRAFT_1702 - probable methyltransferase, at 1,778,217 to 1,779,164
_1702
B158DRAFT_1703: B158DRAFT_1703 - TIGR03440 family protein, at 1,779,185 to 1,780,522
_1703
B158DRAFT_1704: B158DRAFT_1704 - Predicted epimerase, PhzC/PhzF homolog, at 1,780,515 to 1,781,354
_1704
B158DRAFT_1705: B158DRAFT_1705 - amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3), at 1,781,422 to 1,782,747
_1705
Position (kb)
1779
1780
1781 Strain fitness (log2 ratio)
-1
0
1 at 1778.223 kb on - strand at 1778.320 kb on + strand, within B158DRAFT_1702 at 1778.320 kb on + strand, within B158DRAFT_1702 at 1778.328 kb on - strand, within B158DRAFT_1702 at 1778.419 kb on - strand, within B158DRAFT_1702 at 1778.536 kb on + strand, within B158DRAFT_1702 at 1778.543 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.568 kb on + strand, within B158DRAFT_1702 at 1778.576 kb on - strand, within B158DRAFT_1702 at 1778.710 kb on + strand, within B158DRAFT_1702 at 1778.718 kb on - strand, within B158DRAFT_1702 at 1778.787 kb on - strand, within B158DRAFT_1702 at 1778.799 kb on - strand, within B158DRAFT_1702 at 1778.856 kb on + strand, within B158DRAFT_1702 at 1778.864 kb on - strand, within B158DRAFT_1702 at 1778.970 kb on + strand, within B158DRAFT_1702 at 1778.978 kb on - strand, within B158DRAFT_1702 at 1779.050 kb on + strand, within B158DRAFT_1702 at 1779.050 kb on + strand, within B158DRAFT_1702 at 1779.268 kb on + strand at 1779.291 kb on - strand at 1779.302 kb on - strand at 1779.365 kb on + strand, within B158DRAFT_1703 at 1779.406 kb on - strand, within B158DRAFT_1703 at 1779.462 kb on + strand, within B158DRAFT_1703 at 1779.470 kb on - strand, within B158DRAFT_1703 at 1779.491 kb on + strand, within B158DRAFT_1703 at 1779.499 kb on - strand, within B158DRAFT_1703 at 1779.501 kb on + strand, within B158DRAFT_1703 at 1779.630 kb on + strand, within B158DRAFT_1703 at 1779.651 kb on - strand, within B158DRAFT_1703 at 1779.728 kb on + strand, within B158DRAFT_1703 at 1779.751 kb on - strand, within B158DRAFT_1703 at 1779.833 kb on - strand, within B158DRAFT_1703 at 1779.970 kb on - strand, within B158DRAFT_1703 at 1780.049 kb on - strand, within B158DRAFT_1703 at 1780.051 kb on + strand, within B158DRAFT_1703 at 1780.051 kb on + strand, within B158DRAFT_1703 at 1780.220 kb on + strand, within B158DRAFT_1703 at 1780.220 kb on + strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.263 kb on + strand, within B158DRAFT_1703 at 1780.271 kb on - strand, within B158DRAFT_1703 at 1780.324 kb on + strand, within B158DRAFT_1703 at 1780.413 kb on + strand at 1780.485 kb on - strand at 1780.503 kb on + strand at 1780.503 kb on - strand at 1780.511 kb on - strand at 1780.511 kb on - strand at 1780.524 kb on + strand at 1780.524 kb on + strand at 1780.525 kb on + strand at 1780.525 kb on + strand at 1780.525 kb on + strand at 1780.550 kb on + strand at 1780.575 kb on - strand at 1780.615 kb on + strand, within B158DRAFT_1704 at 1780.671 kb on + strand, within B158DRAFT_1704 at 1780.699 kb on + strand, within B158DRAFT_1704 at 1780.707 kb on - strand, within B158DRAFT_1704 at 1780.707 kb on - strand, within B158DRAFT_1704 at 1780.709 kb on + strand, within B158DRAFT_1704 at 1780.717 kb on - strand, within B158DRAFT_1704 at 1780.849 kb on - strand, within B158DRAFT_1704 at 1780.857 kb on - strand, within B158DRAFT_1704 at 1780.876 kb on + strand, within B158DRAFT_1704 at 1780.876 kb on + strand, within B158DRAFT_1704 at 1780.884 kb on - strand, within B158DRAFT_1704 at 1780.884 kb on - strand, within B158DRAFT_1704 at 1781.060 kb on + strand, within B158DRAFT_1704 at 1781.060 kb on + strand, within B158DRAFT_1704 at 1781.153 kb on + strand, within B158DRAFT_1704 at 1781.174 kb on - strand, within B158DRAFT_1704 at 1781.174 kb on - strand, within B158DRAFT_1704 at 1781.211 kb on - strand, within B158DRAFT_1704 at 1781.213 kb on + strand, within B158DRAFT_1704 at 1781.215 kb on + strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.305 kb on + strand at 1781.350 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM remove 1,778,223 - -0.2 1,778,320 + B158DRAFT_1702 0.11 +0.5 1,778,320 + B158DRAFT_1702 0.11 -0.7 1,778,328 - B158DRAFT_1702 0.12 +0.3 1,778,419 - B158DRAFT_1702 0.21 -0.8 1,778,536 + B158DRAFT_1702 0.34 +0.3 1,778,543 + B158DRAFT_1702 0.34 +0.0 1,778,551 + B158DRAFT_1702 0.35 +0.1 1,778,551 + B158DRAFT_1702 0.35 -0.8 1,778,551 + B158DRAFT_1702 0.35 +0.4 1,778,568 + B158DRAFT_1702 0.37 -0.3 1,778,576 - B158DRAFT_1702 0.38 -0.3 1,778,710 + B158DRAFT_1702 0.52 -0.6 1,778,718 - B158DRAFT_1702 0.53 -0.4 1,778,787 - B158DRAFT_1702 0.60 +0.0 1,778,799 - B158DRAFT_1702 0.61 -0.4 1,778,856 + B158DRAFT_1702 0.67 +0.6 1,778,864 - B158DRAFT_1702 0.68 -1.4 1,778,970 + B158DRAFT_1702 0.79 -0.3 1,778,978 - B158DRAFT_1702 0.80 -0.5 1,779,050 + B158DRAFT_1702 0.88 -0.2 1,779,050 + B158DRAFT_1702 0.88 -0.1 1,779,268 + +0.3 1,779,291 - +0.4 1,779,302 - +0.4 1,779,365 + B158DRAFT_1703 0.13 +0.5 1,779,406 - B158DRAFT_1703 0.17 +0.1 1,779,462 + B158DRAFT_1703 0.21 +0.3 1,779,470 - B158DRAFT_1703 0.21 -1.2 1,779,491 + B158DRAFT_1703 0.23 -0.0 1,779,499 - B158DRAFT_1703 0.23 -0.2 1,779,501 + B158DRAFT_1703 0.24 -0.4 1,779,630 + B158DRAFT_1703 0.33 -0.2 1,779,651 - B158DRAFT_1703 0.35 +0.4 1,779,728 + B158DRAFT_1703 0.41 -0.0 1,779,751 - B158DRAFT_1703 0.42 -0.2 1,779,833 - B158DRAFT_1703 0.48 -0.0 1,779,970 - B158DRAFT_1703 0.59 +0.4 1,780,049 - B158DRAFT_1703 0.65 +0.9 1,780,051 + B158DRAFT_1703 0.65 +0.4 1,780,051 + B158DRAFT_1703 0.65 -0.7 1,780,220 + B158DRAFT_1703 0.77 +0.9 1,780,220 + B158DRAFT_1703 0.77 +0.6 1,780,228 - B158DRAFT_1703 0.78 +0.3 1,780,228 - B158DRAFT_1703 0.78 +0.0 1,780,228 - B158DRAFT_1703 0.78 -0.2 1,780,263 + B158DRAFT_1703 0.81 +0.0 1,780,271 - B158DRAFT_1703 0.81 +0.7 1,780,324 + B158DRAFT_1703 0.85 +0.6 1,780,413 + -0.6 1,780,485 - -0.1 1,780,503 + -1.2 1,780,503 - +1.2 1,780,511 - +0.0 1,780,511 - +0.1 1,780,524 + -0.1 1,780,524 + -0.3 1,780,525 + -0.1 1,780,525 + -0.2 1,780,525 + -0.8 1,780,550 + -0.5 1,780,575 - -0.1 1,780,615 + B158DRAFT_1704 0.12 +0.5 1,780,671 + B158DRAFT_1704 0.19 -0.5 1,780,699 + B158DRAFT_1704 0.22 -0.4 1,780,707 - B158DRAFT_1704 0.23 -0.1 1,780,707 - B158DRAFT_1704 0.23 -0.3 1,780,709 + B158DRAFT_1704 0.23 +0.1 1,780,717 - B158DRAFT_1704 0.24 -0.1 1,780,849 - B158DRAFT_1704 0.40 +0.3 1,780,857 - B158DRAFT_1704 0.41 +0.3 1,780,876 + B158DRAFT_1704 0.43 -0.8 1,780,876 + B158DRAFT_1704 0.43 +0.6 1,780,884 - B158DRAFT_1704 0.44 -0.4 1,780,884 - B158DRAFT_1704 0.44 -0.2 1,781,060 + B158DRAFT_1704 0.65 -0.2 1,781,060 + B158DRAFT_1704 0.65 +0.1 1,781,153 + B158DRAFT_1704 0.76 -0.0 1,781,174 - B158DRAFT_1704 0.78 -0.4 1,781,174 - B158DRAFT_1704 0.78 -0.2 1,781,211 - B158DRAFT_1704 0.83 +0.6 1,781,213 + B158DRAFT_1704 0.83 -0.4 1,781,215 + B158DRAFT_1704 0.83 +0.0 1,781,223 - B158DRAFT_1704 0.84 -0.3 1,781,223 - B158DRAFT_1704 0.84 -0.7 1,781,223 - B158DRAFT_1704 0.84 +0.8 1,781,281 + +0.1 1,781,281 + +0.0 1,781,281 + +0.1 1,781,281 + +0.3 1,781,281 + -0.2 1,781,281 + -0.5 1,781,281 + +0.2 1,781,281 + -1.0 1,781,281 + -0.5 1,781,281 + +0.3 1,781,281 + -1.0 1,781,289 - -0.4 1,781,289 - +0.5 1,781,289 - +0.7 1,781,289 - +0.1 1,781,289 - +0.2 1,781,289 - -0.1 1,781,289 - +0.3 1,781,289 - -0.4 1,781,289 - -0.4 1,781,289 - +0.4 1,781,305 + -0.6 1,781,350 + -0.9
Or see this region's nucleotide sequence