Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2226 and B158DRAFT_2227 are separated by 164 nucleotides B158DRAFT_2227 and B158DRAFT_2228 are separated by 115 nucleotides
B158DRAFT_2226: B158DRAFT_2226 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 374,966 to 377,461
_2226
B158DRAFT_2227: B158DRAFT_2227 - DNA topoisomerase I, bacterial, at 377,626 to 380,256
_2227
B158DRAFT_2228: B158DRAFT_2228 - dihydroorotate oxidase A (EC 1.3.3.1), at 380,372 to 381,400
_2228
Position (kb) 377
378
379
380
381 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 376.628 kb on + strand, within B158DRAFT_2226 at 376.650 kb on + strand, within B158DRAFT_2226 at 376.702 kb on + strand, within B158DRAFT_2226 at 376.720 kb on + strand, within B158DRAFT_2226 at 376.769 kb on + strand, within B158DRAFT_2226 at 376.769 kb on + strand, within B158DRAFT_2226 at 376.769 kb on + strand, within B158DRAFT_2226 at 376.769 kb on + strand, within B158DRAFT_2226 at 376.769 kb on + strand, within B158DRAFT_2226 at 376.777 kb on - strand, within B158DRAFT_2226 at 376.777 kb on - strand, within B158DRAFT_2226 at 376.884 kb on + strand, within B158DRAFT_2226 at 376.993 kb on - strand, within B158DRAFT_2226 at 377.053 kb on + strand, within B158DRAFT_2226 at 377.054 kb on + strand, within B158DRAFT_2226 at 377.061 kb on - strand, within B158DRAFT_2226 at 377.062 kb on - strand, within B158DRAFT_2226 at 377.062 kb on - strand, within B158DRAFT_2226 at 377.062 kb on - strand, within B158DRAFT_2226 at 377.062 kb on - strand, within B158DRAFT_2226 at 377.074 kb on + strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.082 kb on - strand, within B158DRAFT_2226 at 377.129 kb on - strand, within B158DRAFT_2226 at 377.129 kb on - strand, within B158DRAFT_2226 at 377.131 kb on + strand, within B158DRAFT_2226 at 377.131 kb on + strand, within B158DRAFT_2226 at 377.139 kb on - strand, within B158DRAFT_2226 at 377.139 kb on - strand, within B158DRAFT_2226 at 377.139 kb on - strand, within B158DRAFT_2226 at 377.144 kb on - strand, within B158DRAFT_2226 at 377.193 kb on - strand, within B158DRAFT_2226 at 377.193 kb on - strand, within B158DRAFT_2226 at 377.193 kb on - strand, within B158DRAFT_2226 at 377.291 kb on + strand at 377.291 kb on + strand at 377.299 kb on - strand at 377.299 kb on - strand at 377.299 kb on - strand at 377.299 kb on - strand at 377.299 kb on - strand at 377.299 kb on - strand at 377.318 kb on + strand at 377.355 kb on + strand at 377.399 kb on + strand at 377.416 kb on - strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.556 kb on + strand at 377.563 kb on + strand at 377.563 kb on + strand at 379.805 kb on - strand, within B158DRAFT_2227 at 379.908 kb on + strand, within B158DRAFT_2227 at 379.908 kb on + strand, within B158DRAFT_2227 at 379.916 kb on - strand, within B158DRAFT_2227 at 379.934 kb on - strand, within B158DRAFT_2227 at 379.962 kb on + strand, within B158DRAFT_2227 at 380.047 kb on + strand at 380.180 kb on - strand at 380.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 376,628 + B158DRAFT_2226 0.67 +0.1 376,650 + B158DRAFT_2226 0.67 -0.2 376,702 + B158DRAFT_2226 0.70 +0.3 376,720 + B158DRAFT_2226 0.70 +0.6 376,769 + B158DRAFT_2226 0.72 -0.1 376,769 + B158DRAFT_2226 0.72 +0.3 376,769 + B158DRAFT_2226 0.72 +0.1 376,769 + B158DRAFT_2226 0.72 -0.5 376,769 + B158DRAFT_2226 0.72 +0.0 376,777 - B158DRAFT_2226 0.73 +0.1 376,777 - B158DRAFT_2226 0.73 +0.4 376,884 + B158DRAFT_2226 0.77 -0.0 376,993 - B158DRAFT_2226 0.81 +1.3 377,053 + B158DRAFT_2226 0.84 +0.4 377,054 + B158DRAFT_2226 0.84 +1.0 377,061 - B158DRAFT_2226 0.84 -0.1 377,062 - B158DRAFT_2226 0.84 -0.0 377,062 - B158DRAFT_2226 0.84 -0.6 377,062 - B158DRAFT_2226 0.84 +0.4 377,062 - B158DRAFT_2226 0.84 -0.7 377,074 + B158DRAFT_2226 0.84 +0.4 377,082 - B158DRAFT_2226 0.85 -0.2 377,082 - B158DRAFT_2226 0.85 +0.2 377,082 - B158DRAFT_2226 0.85 +0.1 377,082 - B158DRAFT_2226 0.85 +0.5 377,082 - B158DRAFT_2226 0.85 -1.2 377,082 - B158DRAFT_2226 0.85 -0.1 377,129 - B158DRAFT_2226 0.87 +0.8 377,129 - B158DRAFT_2226 0.87 +0.0 377,131 + B158DRAFT_2226 0.87 -0.5 377,131 + B158DRAFT_2226 0.87 +0.2 377,139 - B158DRAFT_2226 0.87 +0.1 377,139 - B158DRAFT_2226 0.87 -0.3 377,139 - B158DRAFT_2226 0.87 +0.1 377,144 - B158DRAFT_2226 0.87 +0.1 377,193 - B158DRAFT_2226 0.89 -0.5 377,193 - B158DRAFT_2226 0.89 -2.5 377,193 - B158DRAFT_2226 0.89 +0.2 377,291 + +0.1 377,291 + +1.7 377,299 - +0.2 377,299 - -0.1 377,299 - -0.1 377,299 - -0.2 377,299 - +0.0 377,299 - +0.4 377,318 + +0.4 377,355 + +0.2 377,399 + -0.1 377,416 - -0.3 377,556 + -2.3 377,556 + -2.2 377,556 + -3.4 377,556 + -2.6 377,556 + -2.5 377,556 + -3.5 377,556 + -3.4 377,563 + -1.2 377,563 + -4.1 379,805 - B158DRAFT_2227 0.83 -2.5 379,908 + B158DRAFT_2227 0.87 -3.2 379,908 + B158DRAFT_2227 0.87 -1.3 379,916 - B158DRAFT_2227 0.87 -3.5 379,934 - B158DRAFT_2227 0.88 -1.9 379,962 + B158DRAFT_2227 0.89 -1.7 380,047 + -2.0 380,180 - -2.2 380,191 - -0.7
Or see this region's nucleotide sequence