Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1202

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1200 and B158DRAFT_1201 are separated by 47 nucleotidesB158DRAFT_1201 and B158DRAFT_1202 are separated by 10 nucleotidesB158DRAFT_1202 and B158DRAFT_1203 are separated by 113 nucleotides B158DRAFT_1200: B158DRAFT_1200 - fumarase, class II (EC 4.2.1.2), at 1,238,550 to 1,239,911 _1200 B158DRAFT_1201: B158DRAFT_1201 - Predicted redox protein, regulator of disulfide bond formation, at 1,239,959 to 1,240,411 _1201 B158DRAFT_1202: B158DRAFT_1202 - EamA-like transporter family., at 1,240,422 to 1,241,318 _1202 B158DRAFT_1203: B158DRAFT_1203 - flavoprotein, HI0933 family, at 1,241,432 to 1,242,619 _1203 Position (kb) 1240 1241 1242Strain fitness (log2 ratio) -1 0 1at 1239.432 kb on + strand, within B158DRAFT_1200at 1239.487 kb on + strand, within B158DRAFT_1200at 1239.487 kb on + strand, within B158DRAFT_1200at 1239.526 kb on - strand, within B158DRAFT_1200at 1239.572 kb on + strand, within B158DRAFT_1200at 1239.814 kb on + strandat 1239.822 kb on - strandat 1240.175 kb on + strand, within B158DRAFT_1201at 1240.194 kb on - strand, within B158DRAFT_1201at 1240.202 kb on - strand, within B158DRAFT_1201at 1240.244 kb on + strand, within B158DRAFT_1201at 1240.252 kb on - strand, within B158DRAFT_1201at 1240.286 kb on + strand, within B158DRAFT_1201at 1240.293 kb on + strand, within B158DRAFT_1201at 1240.293 kb on + strand, within B158DRAFT_1201at 1240.301 kb on - strand, within B158DRAFT_1201at 1240.301 kb on - strand, within B158DRAFT_1201at 1240.439 kb on + strandat 1240.467 kb on - strandat 1240.472 kb on - strandat 1240.507 kb on - strandat 1240.565 kb on - strand, within B158DRAFT_1202at 1240.607 kb on - strand, within B158DRAFT_1202at 1240.661 kb on - strand, within B158DRAFT_1202at 1240.690 kb on + strand, within B158DRAFT_1202at 1240.696 kb on + strand, within B158DRAFT_1202at 1240.696 kb on + strand, within B158DRAFT_1202at 1240.745 kb on - strand, within B158DRAFT_1202at 1240.778 kb on - strand, within B158DRAFT_1202at 1240.848 kb on + strand, within B158DRAFT_1202at 1240.855 kb on + strand, within B158DRAFT_1202at 1240.855 kb on + strand, within B158DRAFT_1202at 1240.863 kb on - strand, within B158DRAFT_1202at 1240.926 kb on + strand, within B158DRAFT_1202at 1240.928 kb on - strand, within B158DRAFT_1202at 1240.929 kb on - strand, within B158DRAFT_1202at 1240.931 kb on + strand, within B158DRAFT_1202at 1240.934 kb on - strand, within B158DRAFT_1202at 1241.036 kb on - strand, within B158DRAFT_1202at 1241.040 kb on + strand, within B158DRAFT_1202at 1241.041 kb on - strand, within B158DRAFT_1202at 1241.100 kb on + strand, within B158DRAFT_1202at 1241.123 kb on + strand, within B158DRAFT_1202at 1241.139 kb on - strand, within B158DRAFT_1202at 1241.189 kb on + strand, within B158DRAFT_1202at 1241.189 kb on + strand, within B158DRAFT_1202at 1241.222 kb on + strand, within B158DRAFT_1202at 1241.277 kb on + strandat 1241.291 kb on + strandat 1241.469 kb on + strandat 1241.474 kb on + strandat 1241.474 kb on + strandat 1241.474 kb on + strandat 1241.477 kb on - strandat 1241.479 kb on + strandat 1241.482 kb on - strandat 1241.482 kb on - strandat 1241.482 kb on - strandat 1241.482 kb on - strandat 1241.487 kb on - strandat 1241.498 kb on + strandat 1241.563 kb on + strand, within B158DRAFT_1203at 1241.571 kb on - strand, within B158DRAFT_1203at 1241.598 kb on + strand, within B158DRAFT_1203at 1241.598 kb on + strand, within B158DRAFT_1203at 1241.598 kb on + strand, within B158DRAFT_1203at 1241.598 kb on + strand, within B158DRAFT_1203at 1241.598 kb on + strand, within B158DRAFT_1203at 1241.601 kb on - strand, within B158DRAFT_1203at 1241.606 kb on - strand, within B158DRAFT_1203at 1241.606 kb on - strand, within B158DRAFT_1203at 1241.611 kb on - strand, within B158DRAFT_1203at 1241.628 kb on + strand, within B158DRAFT_1203at 1241.631 kb on - strand, within B158DRAFT_1203at 1241.638 kb on - strand, within B158DRAFT_1203at 1241.648 kb on + strand, within B158DRAFT_1203at 1241.648 kb on + strand, within B158DRAFT_1203at 1241.648 kb on + strand, within B158DRAFT_1203at 1241.648 kb on + strand, within B158DRAFT_1203at 1241.648 kb on + strand, within B158DRAFT_1203at 1241.656 kb on - strand, within B158DRAFT_1203at 1241.656 kb on - strand, within B158DRAFT_1203at 1241.656 kb on - strand, within B158DRAFT_1203at 1241.666 kb on - strand, within B158DRAFT_1203at 1241.791 kb on + strand, within B158DRAFT_1203at 1241.791 kb on + strand, within B158DRAFT_1203at 1241.796 kb on + strand, within B158DRAFT_1203at 1241.850 kb on + strand, within B158DRAFT_1203at 1241.866 kb on - strand, within B158DRAFT_1203at 1241.872 kb on + strand, within B158DRAFT_1203at 1241.928 kb on + strand, within B158DRAFT_1203at 1242.021 kb on + strand, within B158DRAFT_1203at 1242.052 kb on + strand, within B158DRAFT_1203at 1242.060 kb on + strand, within B158DRAFT_1203at 1242.130 kb on - strand, within B158DRAFT_1203at 1242.136 kb on - strand, within B158DRAFT_1203at 1242.214 kb on - strand, within B158DRAFT_1203at 1242.216 kb on + strand, within B158DRAFT_1203at 1242.216 kb on + strand, within B158DRAFT_1203at 1242.224 kb on - strand, within B158DRAFT_1203at 1242.250 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.262 kb on + strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.270 kb on - strand, within B158DRAFT_1203at 1242.279 kb on - strand, within B158DRAFT_1203at 1242.311 kb on - strand, within B158DRAFT_1203

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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1,239,432 + B158DRAFT_1200 0.65 -1.1
1,239,487 + B158DRAFT_1200 0.69 +0.2
1,239,487 + B158DRAFT_1200 0.69 +0.1
1,239,526 - B158DRAFT_1200 0.72 +0.2
1,239,572 + B158DRAFT_1200 0.75 +0.7
1,239,814 + -0.3
1,239,822 - -0.1
1,240,175 + B158DRAFT_1201 0.48 -0.4
1,240,194 - B158DRAFT_1201 0.52 +0.6
1,240,202 - B158DRAFT_1201 0.54 +0.2
1,240,244 + B158DRAFT_1201 0.63 +0.3
1,240,252 - B158DRAFT_1201 0.65 +0.0
1,240,286 + B158DRAFT_1201 0.72 -0.1
1,240,293 + B158DRAFT_1201 0.74 -0.3
1,240,293 + B158DRAFT_1201 0.74 -0.3
1,240,301 - B158DRAFT_1201 0.75 -0.1
1,240,301 - B158DRAFT_1201 0.75 -0.4
1,240,439 + -0.4
1,240,467 - -0.4
1,240,472 - +0.3
1,240,507 - -0.9
1,240,565 - B158DRAFT_1202 0.16 +0.5
1,240,607 - B158DRAFT_1202 0.21 +0.3
1,240,661 - B158DRAFT_1202 0.27 -0.4
1,240,690 + B158DRAFT_1202 0.30 +0.7
1,240,696 + B158DRAFT_1202 0.31 +0.3
1,240,696 + B158DRAFT_1202 0.31 +0.5
1,240,745 - B158DRAFT_1202 0.36 +1.0
1,240,778 - B158DRAFT_1202 0.40 -0.2
1,240,848 + B158DRAFT_1202 0.47 -0.3
1,240,855 + B158DRAFT_1202 0.48 +0.3
1,240,855 + B158DRAFT_1202 0.48 +0.1
1,240,863 - B158DRAFT_1202 0.49 -0.3
1,240,926 + B158DRAFT_1202 0.56 -0.2
1,240,928 - B158DRAFT_1202 0.56 -0.1
1,240,929 - B158DRAFT_1202 0.57 +0.2
1,240,931 + B158DRAFT_1202 0.57 +0.0
1,240,934 - B158DRAFT_1202 0.57 +0.3
1,241,036 - B158DRAFT_1202 0.68 -0.7
1,241,040 + B158DRAFT_1202 0.69 -0.0
1,241,041 - B158DRAFT_1202 0.69 +0.4
1,241,100 + B158DRAFT_1202 0.76 +0.3
1,241,123 + B158DRAFT_1202 0.78 -0.2
1,241,139 - B158DRAFT_1202 0.80 +0.0
1,241,189 + B158DRAFT_1202 0.86 +0.1
1,241,189 + B158DRAFT_1202 0.86 +0.3
1,241,222 + B158DRAFT_1202 0.89 -0.1
1,241,277 + -0.4
1,241,291 + -0.9
1,241,469 + -1.4
1,241,474 + -0.1
1,241,474 + +0.5
1,241,474 + -0.6
1,241,477 - +0.3
1,241,479 + -0.2
1,241,482 - -1.3
1,241,482 - -0.2
1,241,482 - +0.1
1,241,482 - -0.8
1,241,487 - +1.3
1,241,498 + +0.2
1,241,563 + B158DRAFT_1203 0.11 +0.8
1,241,571 - B158DRAFT_1203 0.12 +0.3
1,241,598 + B158DRAFT_1203 0.14 -0.4
1,241,598 + B158DRAFT_1203 0.14 -1.2
1,241,598 + B158DRAFT_1203 0.14 -0.1
1,241,598 + B158DRAFT_1203 0.14 -0.3
1,241,598 + B158DRAFT_1203 0.14 +0.3
1,241,601 - B158DRAFT_1203 0.14 -0.2
1,241,606 - B158DRAFT_1203 0.15 +0.1
1,241,606 - B158DRAFT_1203 0.15 -0.6
1,241,611 - B158DRAFT_1203 0.15 -0.0
1,241,628 + B158DRAFT_1203 0.16 -0.5
1,241,631 - B158DRAFT_1203 0.17 +0.0
1,241,638 - B158DRAFT_1203 0.17 -0.3
1,241,648 + B158DRAFT_1203 0.18 -0.4
1,241,648 + B158DRAFT_1203 0.18 +0.4
1,241,648 + B158DRAFT_1203 0.18 -0.1
1,241,648 + B158DRAFT_1203 0.18 -0.0
1,241,648 + B158DRAFT_1203 0.18 -0.3
1,241,656 - B158DRAFT_1203 0.19 -0.9
1,241,656 - B158DRAFT_1203 0.19 +0.2
1,241,656 - B158DRAFT_1203 0.19 +0.0
1,241,666 - B158DRAFT_1203 0.20 +1.1
1,241,791 + B158DRAFT_1203 0.30 -0.3
1,241,791 + B158DRAFT_1203 0.30 +1.5
1,241,796 + B158DRAFT_1203 0.31 -0.3
1,241,850 + B158DRAFT_1203 0.35 -0.0
1,241,866 - B158DRAFT_1203 0.37 -0.8
1,241,872 + B158DRAFT_1203 0.37 -0.3
1,241,928 + B158DRAFT_1203 0.42 +0.7
1,242,021 + B158DRAFT_1203 0.50 +0.1
1,242,052 + B158DRAFT_1203 0.52 +1.0
1,242,060 + B158DRAFT_1203 0.53 -0.1
1,242,130 - B158DRAFT_1203 0.59 -0.2
1,242,136 - B158DRAFT_1203 0.59 +0.2
1,242,214 - B158DRAFT_1203 0.66 -0.4
1,242,216 + B158DRAFT_1203 0.66 -0.0
1,242,216 + B158DRAFT_1203 0.66 +0.3
1,242,224 - B158DRAFT_1203 0.67 +0.0
1,242,250 + B158DRAFT_1203 0.69 -0.0
1,242,262 + B158DRAFT_1203 0.70 -0.2
1,242,262 + B158DRAFT_1203 0.70 -0.1
1,242,262 + B158DRAFT_1203 0.70 +0.2
1,242,262 + B158DRAFT_1203 0.70 +0.3
1,242,262 + B158DRAFT_1203 0.70 -0.0
1,242,262 + B158DRAFT_1203 0.70 -0.4
1,242,262 + B158DRAFT_1203 0.70 -0.3
1,242,262 + B158DRAFT_1203 0.70 -0.5
1,242,262 + B158DRAFT_1203 0.70 +0.2
1,242,270 - B158DRAFT_1203 0.71 -1.3
1,242,270 - B158DRAFT_1203 0.71 -0.5
1,242,270 - B158DRAFT_1203 0.71 +0.4
1,242,270 - B158DRAFT_1203 0.71 -0.5
1,242,270 - B158DRAFT_1203 0.71 -0.4
1,242,270 - B158DRAFT_1203 0.71 +0.1
1,242,270 - B158DRAFT_1203 0.71 +0.1
1,242,270 - B158DRAFT_1203 0.71 -0.6
1,242,270 - B158DRAFT_1203 0.71 -0.2
1,242,270 - B158DRAFT_1203 0.71 +1.2
1,242,270 - B158DRAFT_1203 0.71 -0.7
1,242,270 - B158DRAFT_1203 0.71 -0.0
1,242,270 - B158DRAFT_1203 0.71 +0.2
1,242,279 - B158DRAFT_1203 0.71 -0.7
1,242,311 - B158DRAFT_1203 0.74 +0.2

Or see this region's nucleotide sequence