Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0068 and B158DRAFT_0069 are separated by 17 nucleotides B158DRAFT_0069 and B158DRAFT_0070 are separated by 129 nucleotides B158DRAFT_0070 and B158DRAFT_0071 are separated by 75 nucleotides B158DRAFT_0071 and B158DRAFT_0072 are separated by 186 nucleotides
B158DRAFT_0068: B158DRAFT_0068 - Putative threonine efflux protein, at 65,725 to 66,372
_0068
B158DRAFT_0069: B158DRAFT_0069 - Uncharacterized membrane-associated protein, at 66,390 to 67,151
_0069
B158DRAFT_0070: B158DRAFT_0070 - hypothetical protein, at 67,281 to 67,727
_0070
B158DRAFT_0071: B158DRAFT_0071 - hypothetical protein, at 67,803 to 68,372
_0071
B158DRAFT_0072: B158DRAFT_0072 - Peptidase family M48., at 68,559 to 69,359
_0072
Position (kb)
67
68 Strain fitness (log2 ratio)
-2
-1
0
1 at 66.425 kb on - strand at 66.524 kb on + strand, within B158DRAFT_0069 at 66.529 kb on + strand, within B158DRAFT_0069 at 66.599 kb on + strand, within B158DRAFT_0069 at 66.609 kb on + strand, within B158DRAFT_0069 at 66.615 kb on - strand, within B158DRAFT_0069 at 66.619 kb on + strand, within B158DRAFT_0069 at 66.627 kb on - strand, within B158DRAFT_0069 at 66.642 kb on + strand, within B158DRAFT_0069 at 66.655 kb on - strand, within B158DRAFT_0069 at 66.655 kb on - strand, within B158DRAFT_0069 at 66.689 kb on - strand, within B158DRAFT_0069 at 66.749 kb on - strand, within B158DRAFT_0069 at 66.749 kb on - strand, within B158DRAFT_0069 at 66.836 kb on + strand, within B158DRAFT_0069 at 66.842 kb on - strand, within B158DRAFT_0069 at 66.922 kb on + strand, within B158DRAFT_0069 at 66.930 kb on - strand, within B158DRAFT_0069 at 66.995 kb on + strand, within B158DRAFT_0069 at 67.037 kb on + strand, within B158DRAFT_0069 at 67.045 kb on - strand, within B158DRAFT_0069 at 67.045 kb on - strand, within B158DRAFT_0069 at 67.080 kb on + strand at 67.100 kb on + strand at 67.100 kb on + strand at 67.207 kb on - strand at 67.209 kb on + strand at 67.278 kb on + strand at 67.283 kb on + strand at 67.283 kb on + strand at 67.286 kb on - strand at 67.286 kb on - strand at 67.286 kb on - strand at 67.288 kb on + strand at 67.355 kb on - strand, within B158DRAFT_0070 at 67.554 kb on + strand, within B158DRAFT_0070 at 67.582 kb on - strand, within B158DRAFT_0070 at 67.614 kb on + strand, within B158DRAFT_0070 at 67.638 kb on + strand, within B158DRAFT_0070 at 67.643 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.648 kb on + strand, within B158DRAFT_0070 at 67.649 kb on - strand, within B158DRAFT_0070 at 67.651 kb on - strand, within B158DRAFT_0070 at 67.722 kb on + strand at 67.800 kb on + strand at 67.901 kb on - strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.939 kb on + strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.947 kb on - strand, within B158DRAFT_0071 at 67.985 kb on - strand, within B158DRAFT_0071 at 68.047 kb on - strand, within B158DRAFT_0071 at 68.052 kb on + strand, within B158DRAFT_0071 at 68.317 kb on - strand at 68.324 kb on + strand at 68.324 kb on + strand at 68.348 kb on + strand at 68.387 kb on - strand at 68.483 kb on + strand at 68.491 kb on - strand at 68.595 kb on + strand at 68.595 kb on + strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.603 kb on - strand at 68.623 kb on + strand at 68.674 kb on + strand, within B158DRAFT_0072 at 68.682 kb on - strand, within B158DRAFT_0072 at 68.726 kb on - strand, within B158DRAFT_0072
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 66,425 - +0.4 66,524 + B158DRAFT_0069 0.18 +0.3 66,529 + B158DRAFT_0069 0.18 +0.1 66,599 + B158DRAFT_0069 0.27 +0.6 66,609 + B158DRAFT_0069 0.29 +0.9 66,615 - B158DRAFT_0069 0.30 +0.6 66,619 + B158DRAFT_0069 0.30 +0.9 66,627 - B158DRAFT_0069 0.31 +0.5 66,642 + B158DRAFT_0069 0.33 +0.9 66,655 - B158DRAFT_0069 0.35 -0.3 66,655 - B158DRAFT_0069 0.35 +0.5 66,689 - B158DRAFT_0069 0.39 +0.9 66,749 - B158DRAFT_0069 0.47 +1.0 66,749 - B158DRAFT_0069 0.47 +0.9 66,836 + B158DRAFT_0069 0.59 -0.0 66,842 - B158DRAFT_0069 0.59 +0.6 66,922 + B158DRAFT_0069 0.70 +0.5 66,930 - B158DRAFT_0069 0.71 +0.4 66,995 + B158DRAFT_0069 0.79 +0.6 67,037 + B158DRAFT_0069 0.85 +1.0 67,045 - B158DRAFT_0069 0.86 +0.4 67,045 - B158DRAFT_0069 0.86 +1.0 67,080 + +0.5 67,100 + +0.7 67,100 + +0.8 67,207 - -0.4 67,209 + -0.0 67,278 + -0.2 67,283 + -0.8 67,283 + -0.3 67,286 - -0.2 67,286 - -0.0 67,286 - -0.6 67,288 + +0.5 67,355 - B158DRAFT_0070 0.17 -0.1 67,554 + B158DRAFT_0070 0.61 -0.1 67,582 - B158DRAFT_0070 0.67 -0.3 67,614 + B158DRAFT_0070 0.74 -0.5 67,638 + B158DRAFT_0070 0.80 -0.0 67,643 + B158DRAFT_0070 0.81 -0.5 67,648 + B158DRAFT_0070 0.82 -1.4 67,648 + B158DRAFT_0070 0.82 +0.3 67,648 + B158DRAFT_0070 0.82 -1.0 67,649 - B158DRAFT_0070 0.82 -0.4 67,651 - B158DRAFT_0070 0.83 +0.0 67,722 + -0.4 67,800 + +0.0 67,901 - B158DRAFT_0071 0.17 +0.1 67,939 + B158DRAFT_0071 0.24 -0.4 67,939 + B158DRAFT_0071 0.24 -0.3 67,939 + B158DRAFT_0071 0.24 -1.2 67,947 - B158DRAFT_0071 0.25 -0.1 67,947 - B158DRAFT_0071 0.25 -1.8 67,947 - B158DRAFT_0071 0.25 +0.0 67,947 - B158DRAFT_0071 0.25 +0.3 67,985 - B158DRAFT_0071 0.32 -0.3 68,047 - B158DRAFT_0071 0.43 -0.3 68,052 + B158DRAFT_0071 0.44 -0.8 68,317 - +0.3 68,324 + +0.3 68,324 + +0.3 68,348 + -0.5 68,387 - -0.7 68,483 + +0.4 68,491 - +0.0 68,595 + -0.1 68,595 + +0.3 68,603 - +0.1 68,603 - -0.2 68,603 - +0.1 68,603 - -0.0 68,603 - +0.4 68,623 + -0.1 68,674 + B158DRAFT_0072 0.14 +0.4 68,682 - B158DRAFT_0072 0.15 +0.2 68,726 - B158DRAFT_0072 0.21 +0.0
Or see this region's nucleotide sequence