Experiment: m.b. Cisplatin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2179 and B158DRAFT_2180 are separated by 243 nucleotides B158DRAFT_2180 and B158DRAFT_2181 are separated by 339 nucleotides
B158DRAFT_2179: B158DRAFT_2179 - L-aspartate oxidase (EC 1.4.3.16), at 325,571 to 327,187
_2179
B158DRAFT_2180: B158DRAFT_2180 - RNA polymerase, sigma-24 subunit, RpoE, at 327,431 to 328,021
_2180
B158DRAFT_2181: B158DRAFT_2181 - Negative regulator of sigma E activity, at 328,361 to 329,041
_2181
Position (kb) 327
328
329 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 326.485 kb on + strand, within B158DRAFT_2179 at 326.494 kb on - strand, within B158DRAFT_2179 at 326.499 kb on + strand, within B158DRAFT_2179 at 326.499 kb on + strand, within B158DRAFT_2179 at 326.507 kb on - strand, within B158DRAFT_2179 at 326.512 kb on - strand, within B158DRAFT_2179 at 326.554 kb on + strand, within B158DRAFT_2179 at 326.554 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.745 kb on + strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.753 kb on - strand, within B158DRAFT_2179 at 326.769 kb on + strand, within B158DRAFT_2179 at 326.860 kb on + strand, within B158DRAFT_2179 at 326.901 kb on - strand, within B158DRAFT_2179 at 326.911 kb on - strand, within B158DRAFT_2179 at 326.911 kb on - strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.941 kb on + strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 326.949 kb on - strand, within B158DRAFT_2179 at 327.012 kb on - strand, within B158DRAFT_2179 at 327.139 kb on + strand at 327.242 kb on + strand at 327.348 kb on + strand at 327.353 kb on + strand at 327.353 kb on + strand at 327.353 kb on + strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.413 kb on - strand at 327.433 kb on + strand at 327.433 kb on - strand at 327.439 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.451 kb on - strand at 327.468 kb on - strand at 327.535 kb on - strand, within B158DRAFT_2180 at 327.553 kb on - strand, within B158DRAFT_2180 at 327.569 kb on - strand, within B158DRAFT_2180 at 327.595 kb on + strand, within B158DRAFT_2180 at 327.603 kb on - strand, within B158DRAFT_2180 at 327.665 kb on + strand, within B158DRAFT_2180 at 327.702 kb on + strand, within B158DRAFT_2180 at 327.708 kb on + strand, within B158DRAFT_2180 at 327.856 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.925 kb on - strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.014 kb on - strand at 328.014 kb on - strand at 328.084 kb on + strand at 328.593 kb on + strand, within B158DRAFT_2181 at 328.629 kb on + strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.765 kb on + strand, within B158DRAFT_2181 at 328.947 kb on - strand, within B158DRAFT_2181 at 328.981 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml remove 326,485 + B158DRAFT_2179 0.57 -2.4 326,494 - B158DRAFT_2179 0.57 -2.9 326,499 + B158DRAFT_2179 0.57 -0.3 326,499 + B158DRAFT_2179 0.57 -0.3 326,507 - B158DRAFT_2179 0.58 -1.4 326,512 - B158DRAFT_2179 0.58 -2.6 326,554 + B158DRAFT_2179 0.61 -2.3 326,554 + B158DRAFT_2179 0.61 -2.2 326,745 + B158DRAFT_2179 0.73 -0.7 326,745 + B158DRAFT_2179 0.73 -2.3 326,745 + B158DRAFT_2179 0.73 -2.5 326,753 - B158DRAFT_2179 0.73 -3.2 326,753 - B158DRAFT_2179 0.73 -2.8 326,753 - B158DRAFT_2179 0.73 -3.4 326,769 + B158DRAFT_2179 0.74 -3.0 326,860 + B158DRAFT_2179 0.80 -1.4 326,901 - B158DRAFT_2179 0.82 -3.5 326,911 - B158DRAFT_2179 0.83 -0.3 326,911 - B158DRAFT_2179 0.83 -1.5 326,941 + B158DRAFT_2179 0.85 -3.8 326,941 + B158DRAFT_2179 0.85 -2.7 326,941 + B158DRAFT_2179 0.85 -1.9 326,941 + B158DRAFT_2179 0.85 -2.4 326,949 - B158DRAFT_2179 0.85 -2.7 326,949 - B158DRAFT_2179 0.85 -0.9 326,949 - B158DRAFT_2179 0.85 -2.3 326,949 - B158DRAFT_2179 0.85 +0.5 326,949 - B158DRAFT_2179 0.85 -1.0 327,012 - B158DRAFT_2179 0.89 -1.3 327,139 + +1.9 327,242 + -2.9 327,348 + -0.7 327,353 + +0.1 327,353 + +0.1 327,353 + +0.2 327,361 - -0.1 327,361 - -0.2 327,361 - -0.5 327,361 - +0.2 327,361 - +0.1 327,361 - -0.4 327,413 - -0.5 327,433 + -0.6 327,433 - -0.1 327,439 + -0.3 327,443 + -0.0 327,443 + +0.0 327,443 + -0.3 327,443 + -0.3 327,451 - -0.0 327,468 - -0.1 327,535 - B158DRAFT_2180 0.18 -0.5 327,553 - B158DRAFT_2180 0.21 -1.3 327,569 - B158DRAFT_2180 0.23 -0.3 327,595 + B158DRAFT_2180 0.28 -0.8 327,603 - B158DRAFT_2180 0.29 -0.6 327,665 + B158DRAFT_2180 0.40 -0.4 327,702 + B158DRAFT_2180 0.46 -0.3 327,708 + B158DRAFT_2180 0.47 -0.9 327,856 + B158DRAFT_2180 0.72 -0.0 327,917 + B158DRAFT_2180 0.82 -0.0 327,917 + B158DRAFT_2180 0.82 -0.4 327,917 + B158DRAFT_2180 0.82 -0.1 327,917 + B158DRAFT_2180 0.82 -1.1 327,925 - B158DRAFT_2180 0.84 -0.5 327,935 + B158DRAFT_2180 0.85 -0.4 327,935 + B158DRAFT_2180 0.85 -1.3 328,006 + -0.4 328,006 + +0.3 328,006 + -0.6 328,006 + +0.3 328,006 + -0.3 328,014 - -0.4 328,014 - -0.4 328,084 + -3.3 328,593 + B158DRAFT_2181 0.34 -1.9 328,629 + B158DRAFT_2181 0.39 -0.4 328,637 - B158DRAFT_2181 0.41 -0.4 328,637 - B158DRAFT_2181 0.41 -0.5 328,644 + B158DRAFT_2181 0.42 +0.4 328,644 + B158DRAFT_2181 0.42 -0.1 328,765 + B158DRAFT_2181 0.59 -1.7 328,947 - B158DRAFT_2181 0.86 +0.6 328,981 + -0.6
Or see this region's nucleotide sequence