Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1590

Experiment: m.b. Cisplatin 0.0125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1589 and B158DRAFT_1590 are separated by 441 nucleotidesB158DRAFT_1590 and B158DRAFT_1591 are separated by 48 nucleotides B158DRAFT_1589: B158DRAFT_1589 - lipoprotein releasing system, ATP-binding protein, at 1,650,291 to 1,650,977 _1589 B158DRAFT_1590: B158DRAFT_1590 - Uncharacterized protein conserved in bacteria, at 1,651,419 to 1,652,066 _1590 B158DRAFT_1591: B158DRAFT_1591 - DNA internalization-related competence protein ComEC/Rec2, at 1,652,115 to 1,654,454 _1591 Position (kb) 1651 1652 1653Strain fitness (log2 ratio) -1 0 1 2at 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.033 kb on + strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.041 kb on - strandat 1651.304 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.362 kb on + strandat 1651.370 kb on - strandat 1651.387 kb on + strandat 1651.395 kb on - strandat 1651.395 kb on - strandat 1651.527 kb on + strand, within B158DRAFT_1590at 1651.563 kb on + strand, within B158DRAFT_1590at 1651.571 kb on - strand, within B158DRAFT_1590at 1651.600 kb on + strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.608 kb on - strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.610 kb on + strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.618 kb on - strand, within B158DRAFT_1590at 1651.721 kb on + strand, within B158DRAFT_1590at 1651.724 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.729 kb on - strand, within B158DRAFT_1590at 1651.740 kb on + strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.750 kb on - strand, within B158DRAFT_1590at 1651.752 kb on - strand, within B158DRAFT_1590at 1651.762 kb on - strand, within B158DRAFT_1590at 1651.780 kb on + strand, within B158DRAFT_1590at 1651.862 kb on - strand, within B158DRAFT_1590at 1651.917 kb on - strand, within B158DRAFT_1590at 1651.945 kb on + strand, within B158DRAFT_1590at 1651.953 kb on - strand, within B158DRAFT_1590at 1652.054 kb on + strandat 1652.075 kb on + strandat 1652.083 kb on - strandat 1652.103 kb on + strandat 1652.103 kb on + strandat 1652.106 kb on - strandat 1652.147 kb on + strandat 1652.157 kb on + strandat 1652.157 kb on + strandat 1652.157 kb on + strandat 1652.160 kb on - strandat 1652.195 kb on - strandat 1652.195 kb on - strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.223 kb on + strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.231 kb on - strandat 1652.252 kb on - strandat 1652.347 kb on + strandat 1652.365 kb on - strand, within B158DRAFT_1591at 1652.373 kb on + strand, within B158DRAFT_1591at 1652.393 kb on + strand, within B158DRAFT_1591at 1652.502 kb on - strand, within B158DRAFT_1591at 1652.502 kb on - strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.561 kb on + strand, within B158DRAFT_1591at 1652.567 kb on + strand, within B158DRAFT_1591at 1652.568 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.569 kb on - strand, within B158DRAFT_1591at 1652.575 kb on - strand, within B158DRAFT_1591at 1652.575 kb on - strand, within B158DRAFT_1591at 1652.580 kb on - strand, within B158DRAFT_1591at 1652.580 kb on - strand, within B158DRAFT_1591at 1652.580 kb on - strand, within B158DRAFT_1591at 1652.591 kb on - strand, within B158DRAFT_1591at 1652.618 kb on + strand, within B158DRAFT_1591at 1652.618 kb on + strand, within B158DRAFT_1591at 1652.628 kb on + strand, within B158DRAFT_1591at 1652.633 kb on + strand, within B158DRAFT_1591at 1652.635 kb on + strand, within B158DRAFT_1591at 1652.635 kb on + strand, within B158DRAFT_1591at 1652.643 kb on - strand, within B158DRAFT_1591at 1652.643 kb on - strand, within B158DRAFT_1591at 1652.689 kb on + strand, within B158DRAFT_1591at 1652.697 kb on - strand, within B158DRAFT_1591at 1652.697 kb on - strand, within B158DRAFT_1591at 1652.767 kb on - strand, within B158DRAFT_1591at 1652.832 kb on - strand, within B158DRAFT_1591at 1652.832 kb on - strand, within B158DRAFT_1591at 1652.917 kb on + strand, within B158DRAFT_1591at 1652.917 kb on + strand, within B158DRAFT_1591at 1652.969 kb on + strand, within B158DRAFT_1591at 1652.993 kb on + strand, within B158DRAFT_1591at 1653.001 kb on - strand, within B158DRAFT_1591at 1653.001 kb on - strand, within B158DRAFT_1591

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
remove
1,651,033 + -0.5
1,651,033 + -1.0
1,651,033 + -0.0
1,651,033 + +0.5
1,651,041 - -0.2
1,651,041 - +0.1
1,651,041 - +0.3
1,651,041 - -0.1
1,651,304 + +0.2
1,651,362 + -0.1
1,651,362 + -0.1
1,651,362 + -0.0
1,651,362 + -0.1
1,651,370 - +0.2
1,651,387 + -1.1
1,651,395 - -0.6
1,651,395 - +0.1
1,651,527 + B158DRAFT_1590 0.17 +1.9
1,651,563 + B158DRAFT_1590 0.22 +1.5
1,651,571 - B158DRAFT_1590 0.23 +1.3
1,651,600 + B158DRAFT_1590 0.28 +0.8
1,651,608 - B158DRAFT_1590 0.29 +1.4
1,651,608 - B158DRAFT_1590 0.29 +1.0
1,651,608 - B158DRAFT_1590 0.29 +0.9
1,651,608 - B158DRAFT_1590 0.29 +0.8
1,651,608 - B158DRAFT_1590 0.29 +1.3
1,651,608 - B158DRAFT_1590 0.29 +1.0
1,651,610 + B158DRAFT_1590 0.29 +1.3
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,610 + B158DRAFT_1590 0.29 +1.4
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,610 + B158DRAFT_1590 0.29 +0.8
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,610 + B158DRAFT_1590 0.29 +1.5
1,651,610 + B158DRAFT_1590 0.29 +1.1
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,610 + B158DRAFT_1590 0.29 +1.2
1,651,618 - B158DRAFT_1590 0.31 +1.1
1,651,618 - B158DRAFT_1590 0.31 +2.0
1,651,618 - B158DRAFT_1590 0.31 +1.3
1,651,618 - B158DRAFT_1590 0.31 +1.1
1,651,618 - B158DRAFT_1590 0.31 +1.0
1,651,721 + B158DRAFT_1590 0.47 +0.7
1,651,724 - B158DRAFT_1590 0.47 +0.7
1,651,729 - B158DRAFT_1590 0.48 +0.8
1,651,729 - B158DRAFT_1590 0.48 +1.7
1,651,729 - B158DRAFT_1590 0.48 +0.9
1,651,740 + B158DRAFT_1590 0.50 +1.0
1,651,750 - B158DRAFT_1590 0.51 +0.3
1,651,750 - B158DRAFT_1590 0.51 +1.2
1,651,750 - B158DRAFT_1590 0.51 +0.9
1,651,752 - B158DRAFT_1590 0.51 +1.1
1,651,762 - B158DRAFT_1590 0.53 +1.1
1,651,780 + B158DRAFT_1590 0.56 +2.1
1,651,862 - B158DRAFT_1590 0.68 +1.0
1,651,917 - B158DRAFT_1590 0.77 +0.9
1,651,945 + B158DRAFT_1590 0.81 +0.7
1,651,953 - B158DRAFT_1590 0.82 +1.6
1,652,054 + +1.3
1,652,075 + +0.4
1,652,083 - +1.2
1,652,103 + +1.0
1,652,103 + +1.1
1,652,106 - +1.2
1,652,147 + +1.0
1,652,157 + +1.2
1,652,157 + +0.7
1,652,157 + +2.3
1,652,160 - +1.0
1,652,195 - +1.2
1,652,195 - +1.0
1,652,223 + +0.8
1,652,223 + +1.0
1,652,223 + +1.1
1,652,223 + +1.2
1,652,223 + +0.9
1,652,223 + +0.7
1,652,223 + +1.0
1,652,223 + +1.2
1,652,223 + +0.4
1,652,223 + +1.1
1,652,223 + +0.9
1,652,223 + +1.2
1,652,231 - +1.1
1,652,231 - +1.9
1,652,231 - +1.2
1,652,231 - +0.6
1,652,231 - +1.4
1,652,231 - +0.9
1,652,231 - +1.1
1,652,231 - +1.1
1,652,231 - +1.1
1,652,231 - +0.9
1,652,231 - +1.3
1,652,231 - +0.6
1,652,231 - +1.0
1,652,252 - +1.3
1,652,347 + +1.2
1,652,365 - B158DRAFT_1591 0.11 +0.8
1,652,373 + B158DRAFT_1591 0.11 +1.1
1,652,393 + B158DRAFT_1591 0.12 -0.7
1,652,502 - B158DRAFT_1591 0.17 -0.3
1,652,502 - B158DRAFT_1591 0.17 +0.4
1,652,561 + B158DRAFT_1591 0.19 -0.1
1,652,561 + B158DRAFT_1591 0.19 -0.2
1,652,561 + B158DRAFT_1591 0.19 +1.0
1,652,561 + B158DRAFT_1591 0.19 -0.7
1,652,561 + B158DRAFT_1591 0.19 +0.1
1,652,561 + B158DRAFT_1591 0.19 +0.4
1,652,561 + B158DRAFT_1591 0.19 -0.4
1,652,567 + B158DRAFT_1591 0.19 -0.5
1,652,568 - B158DRAFT_1591 0.19 -0.1
1,652,569 - B158DRAFT_1591 0.19 -0.2
1,652,569 - B158DRAFT_1591 0.19 +0.2
1,652,569 - B158DRAFT_1591 0.19 +0.1
1,652,569 - B158DRAFT_1591 0.19 +0.4
1,652,569 - B158DRAFT_1591 0.19 -0.5
1,652,569 - B158DRAFT_1591 0.19 -0.1
1,652,575 - B158DRAFT_1591 0.20 +0.2
1,652,575 - B158DRAFT_1591 0.20 -0.6
1,652,580 - B158DRAFT_1591 0.20 +0.2
1,652,580 - B158DRAFT_1591 0.20 -0.4
1,652,580 - B158DRAFT_1591 0.20 -0.3
1,652,591 - B158DRAFT_1591 0.20 -0.4
1,652,618 + B158DRAFT_1591 0.21 +0.2
1,652,618 + B158DRAFT_1591 0.21 -0.5
1,652,628 + B158DRAFT_1591 0.22 -0.2
1,652,633 + B158DRAFT_1591 0.22 -1.2
1,652,635 + B158DRAFT_1591 0.22 +0.1
1,652,635 + B158DRAFT_1591 0.22 -0.4
1,652,643 - B158DRAFT_1591 0.23 +0.4
1,652,643 - B158DRAFT_1591 0.23 -0.4
1,652,689 + B158DRAFT_1591 0.25 +0.2
1,652,697 - B158DRAFT_1591 0.25 +0.1
1,652,697 - B158DRAFT_1591 0.25 -0.3
1,652,767 - B158DRAFT_1591 0.28 -0.0
1,652,832 - B158DRAFT_1591 0.31 -0.4
1,652,832 - B158DRAFT_1591 0.31 +0.5
1,652,917 + B158DRAFT_1591 0.34 +0.4
1,652,917 + B158DRAFT_1591 0.34 +0.5
1,652,969 + B158DRAFT_1591 0.36 -0.2
1,652,993 + B158DRAFT_1591 0.38 -1.0
1,653,001 - B158DRAFT_1591 0.38 -0.1
1,653,001 - B158DRAFT_1591 0.38 +0.5

Or see this region's nucleotide sequence