Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1080

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1077 and B158DRAFT_1078 are separated by 6 nucleotidesB158DRAFT_1078 and B158DRAFT_1080 are separated by 417 nucleotidesB158DRAFT_1080 and B158DRAFT_1081 are separated by 107 nucleotides B158DRAFT_1077: B158DRAFT_1077 - Fatty-acid desaturase, at 1,115,807 to 1,116,718 _1077 B158DRAFT_1078: B158DRAFT_1078 - hypothetical protein, at 1,116,725 to 1,117,114 _1078 B158DRAFT_1080: B158DRAFT_1080 - ribosomal protein S2, bacterial type, at 1,117,532 to 1,118,266 _1080 B158DRAFT_1081: B158DRAFT_1081 - translation elongation factor Ts, at 1,118,374 to 1,119,243 _1081 Position (kb) 1117 1118 1119Strain fitness (log2 ratio) -2 -1 0 1at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.584 kb on + strand, within B158DRAFT_1077at 1116.639 kb on + strandat 1116.639 kb on + strandat 1116.647 kb on - strandat 1116.660 kb on + strandat 1116.660 kb on + strandat 1116.665 kb on + strandat 1116.798 kb on + strand, within B158DRAFT_1078at 1116.899 kb on + strand, within B158DRAFT_1078at 1116.935 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.041 kb on - strand, within B158DRAFT_1078at 1117.088 kb on + strandat 1117.111 kb on + strandat 1117.118 kb on + strandat 1117.149 kb on - strandat 1117.157 kb on + strandat 1117.179 kb on - strandat 1117.184 kb on - strandat 1117.219 kb on + strandat 1117.219 kb on + strandat 1117.227 kb on - strandat 1117.227 kb on - strandat 1117.258 kb on + strandat 1117.258 kb on + strandat 1117.277 kb on - strandat 1117.296 kb on + strandat 1118.204 kb on + strandat 1119.254 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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1,116,546 - B158DRAFT_1077 0.81 -0.3
1,116,546 - B158DRAFT_1077 0.81 -0.5
1,116,546 - B158DRAFT_1077 0.81 -0.2
1,116,556 - B158DRAFT_1077 0.82 -0.4
1,116,556 - B158DRAFT_1077 0.82 -0.1
1,116,584 + B158DRAFT_1077 0.85 +0.2
1,116,639 + -1.7
1,116,639 + -0.4
1,116,647 - -0.9
1,116,660 + -0.2
1,116,660 + -0.4
1,116,665 + -0.5
1,116,798 + B158DRAFT_1078 0.19 +0.1
1,116,899 + B158DRAFT_1078 0.45 -0.5
1,116,935 + B158DRAFT_1078 0.54 -0.1
1,117,033 + B158DRAFT_1078 0.79 -0.9
1,117,033 + B158DRAFT_1078 0.79 +0.1
1,117,041 - B158DRAFT_1078 0.81 -0.6
1,117,088 + -0.1
1,117,111 + -0.3
1,117,118 + -0.2
1,117,149 - +0.1
1,117,157 + -0.5
1,117,179 - -0.6
1,117,184 - +0.2
1,117,219 + -0.3
1,117,219 + +0.0
1,117,227 - +0.8
1,117,227 - -0.3
1,117,258 + -0.7
1,117,258 + -0.0
1,117,277 - -0.5
1,117,296 + -0.1
1,118,204 + -2.0
1,119,254 + -2.1

Or see this region's nucleotide sequence