Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0975

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0973 and B158DRAFT_0974 are separated by 55 nucleotidesB158DRAFT_0974 and B158DRAFT_0975 are separated by 196 nucleotidesB158DRAFT_0975 and B158DRAFT_0976 are separated by 32 nucleotidesB158DRAFT_0976 and B158DRAFT_0977 are separated by 40 nucleotides B158DRAFT_0973: B158DRAFT_0973 - type I secretion outer membrane protein, TolC family, at 1,003,718 to 1,005,091 _0973 B158DRAFT_0974: B158DRAFT_0974 - Protein-L-isoaspartate carboxylmethyltransferase, at 1,005,147 to 1,005,815 _0974 B158DRAFT_0975: B158DRAFT_0975 - nudix-type nucleoside diphosphatase, YffH/AdpP family, at 1,006,012 to 1,006,623 _0975 B158DRAFT_0976: B158DRAFT_0976 - Uncharacterized protein conserved in bacteria, at 1,006,656 to 1,007,132 _0976 B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997 _0977 Position (kb) 1006 1007Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1005.278 kb on + strand, within B158DRAFT_0974at 1005.278 kb on - strand, within B158DRAFT_0974at 1005.283 kb on + strand, within B158DRAFT_0974at 1005.283 kb on + strand, within B158DRAFT_0974at 1005.326 kb on - strand, within B158DRAFT_0974at 1005.326 kb on - strand, within B158DRAFT_0974at 1005.373 kb on + strand, within B158DRAFT_0974at 1005.453 kb on - strand, within B158DRAFT_0974at 1005.497 kb on - strand, within B158DRAFT_0974at 1005.497 kb on - strand, within B158DRAFT_0974at 1005.521 kb on + strand, within B158DRAFT_0974at 1005.531 kb on - strand, within B158DRAFT_0974at 1005.565 kb on - strand, within B158DRAFT_0974at 1005.593 kb on + strand, within B158DRAFT_0974at 1005.593 kb on + strand, within B158DRAFT_0974at 1005.594 kb on - strand, within B158DRAFT_0974at 1005.627 kb on - strand, within B158DRAFT_0974at 1005.629 kb on + strand, within B158DRAFT_0974at 1005.637 kb on - strand, within B158DRAFT_0974at 1005.637 kb on - strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.675 kb on + strand, within B158DRAFT_0974at 1005.683 kb on - strand, within B158DRAFT_0974at 1005.694 kb on - strand, within B158DRAFT_0974at 1005.772 kb on - strandat 1005.774 kb on + strandat 1005.841 kb on - strandat 1005.841 kb on - strandat 1005.876 kb on + strandat 1005.876 kb on + strandat 1005.884 kb on - strandat 1005.884 kb on - strandat 1005.903 kb on + strandat 1005.904 kb on - strandat 1005.924 kb on - strandat 1005.972 kb on - strandat 1005.986 kb on + strandat 1005.993 kb on - strandat 1006.004 kb on - strandat 1006.131 kb on - strand, within B158DRAFT_0975at 1006.133 kb on + strand, within B158DRAFT_0975at 1006.133 kb on + strand, within B158DRAFT_0975at 1006.133 kb on + strand, within B158DRAFT_0975at 1006.133 kb on + strand, within B158DRAFT_0975at 1006.133 kb on + strand, within B158DRAFT_0975at 1006.135 kb on + strand, within B158DRAFT_0975at 1006.135 kb on + strand, within B158DRAFT_0975at 1006.135 kb on + strand, within B158DRAFT_0975at 1006.135 kb on + strand, within B158DRAFT_0975at 1006.135 kb on + strand, within B158DRAFT_0975at 1006.141 kb on - strand, within B158DRAFT_0975at 1006.141 kb on - strand, within B158DRAFT_0975at 1006.141 kb on - strand, within B158DRAFT_0975at 1006.141 kb on - strand, within B158DRAFT_0975at 1006.141 kb on - strand, within B158DRAFT_0975at 1006.143 kb on - strand, within B158DRAFT_0975at 1006.143 kb on - strand, within B158DRAFT_0975at 1006.143 kb on - strand, within B158DRAFT_0975at 1006.199 kb on - strand, within B158DRAFT_0975at 1006.214 kb on + strand, within B158DRAFT_0975at 1006.219 kb on + strand, within B158DRAFT_0975at 1006.227 kb on - strand, within B158DRAFT_0975at 1006.246 kb on + strand, within B158DRAFT_0975at 1006.254 kb on - strand, within B158DRAFT_0975at 1006.254 kb on - strand, within B158DRAFT_0975at 1006.259 kb on - strand, within B158DRAFT_0975at 1006.264 kb on - strand, within B158DRAFT_0975at 1006.287 kb on + strand, within B158DRAFT_0975at 1006.305 kb on - strand, within B158DRAFT_0975at 1006.307 kb on + strand, within B158DRAFT_0975at 1006.335 kb on + strand, within B158DRAFT_0975at 1006.338 kb on - strand, within B158DRAFT_0975at 1006.339 kb on - strand, within B158DRAFT_0975at 1006.379 kb on + strand, within B158DRAFT_0975at 1006.385 kb on + strand, within B158DRAFT_0975at 1006.394 kb on - strand, within B158DRAFT_0975at 1006.400 kb on + strand, within B158DRAFT_0975at 1006.411 kb on - strand, within B158DRAFT_0975at 1006.411 kb on - strand, within B158DRAFT_0975at 1006.428 kb on + strand, within B158DRAFT_0975at 1006.488 kb on + strand, within B158DRAFT_0975at 1006.645 kb on + strandat 1006.653 kb on + strandat 1006.653 kb on + strandat 1006.653 kb on - strandat 1006.694 kb on + strandat 1006.694 kb on + strandat 1006.702 kb on - strandat 1006.702 kb on - strandat 1006.739 kb on + strand, within B158DRAFT_0976at 1006.752 kb on + strand, within B158DRAFT_0976at 1006.758 kb on + strand, within B158DRAFT_0976at 1006.814 kb on + strand, within B158DRAFT_0976at 1006.822 kb on + strand, within B158DRAFT_0976at 1006.822 kb on - strand, within B158DRAFT_0976at 1006.858 kb on + strand, within B158DRAFT_0976at 1006.858 kb on + strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.877 kb on + strand, within B158DRAFT_0976at 1006.885 kb on - strand, within B158DRAFT_0976at 1006.963 kb on + strand, within B158DRAFT_0976at 1006.963 kb on - strand, within B158DRAFT_0976at 1006.970 kb on - strand, within B158DRAFT_0976at 1007.062 kb on + strand, within B158DRAFT_0976at 1007.090 kb on + strandat 1007.178 kb on - strandat 1007.184 kb on - strandat 1007.231 kb on + strandat 1007.231 kb on + strandat 1007.239 kb on - strandat 1007.270 kb on - strand, within B158DRAFT_0977at 1007.373 kb on + strand, within B158DRAFT_0977at 1007.376 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.381 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.424 kb on - strand, within B158DRAFT_0977at 1007.462 kb on - strand, within B158DRAFT_0977at 1007.478 kb on - strand, within B158DRAFT_0977at 1007.563 kb on - strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.572 kb on + strand, within B158DRAFT_0977at 1007.604 kb on - strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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1,005,278 + B158DRAFT_0974 0.20 -0.6
1,005,278 - B158DRAFT_0974 0.20 -1.6
1,005,283 + B158DRAFT_0974 0.20 -1.3
1,005,283 + B158DRAFT_0974 0.20 -1.2
1,005,326 - B158DRAFT_0974 0.27 -0.6
1,005,326 - B158DRAFT_0974 0.27 -1.6
1,005,373 + B158DRAFT_0974 0.34 -0.6
1,005,453 - B158DRAFT_0974 0.46 -1.2
1,005,497 - B158DRAFT_0974 0.52 -0.8
1,005,497 - B158DRAFT_0974 0.52 -0.6
1,005,521 + B158DRAFT_0974 0.56 -2.0
1,005,531 - B158DRAFT_0974 0.57 +1.6
1,005,565 - B158DRAFT_0974 0.62 -0.4
1,005,593 + B158DRAFT_0974 0.67 -1.9
1,005,593 + B158DRAFT_0974 0.67 -3.4
1,005,594 - B158DRAFT_0974 0.67 -0.8
1,005,627 - B158DRAFT_0974 0.72 -0.5
1,005,629 + B158DRAFT_0974 0.72 -0.8
1,005,637 - B158DRAFT_0974 0.73 -0.9
1,005,637 - B158DRAFT_0974 0.73 -1.0
1,005,675 + B158DRAFT_0974 0.79 -0.4
1,005,675 + B158DRAFT_0974 0.79 -2.2
1,005,675 + B158DRAFT_0974 0.79 -2.6
1,005,675 + B158DRAFT_0974 0.79 -1.9
1,005,675 + B158DRAFT_0974 0.79 -1.9
1,005,675 + B158DRAFT_0974 0.79 -0.1
1,005,683 - B158DRAFT_0974 0.80 -1.1
1,005,694 - B158DRAFT_0974 0.82 -0.3
1,005,772 - -0.3
1,005,774 + -2.6
1,005,841 - -1.1
1,005,841 - -1.7
1,005,876 + -1.6
1,005,876 + -2.9
1,005,884 - -1.2
1,005,884 - -1.6
1,005,903 + -0.4
1,005,904 - -0.5
1,005,924 - -0.7
1,005,972 - +1.8
1,005,986 + -0.1
1,005,993 - -0.1
1,006,004 - +0.2
1,006,131 - B158DRAFT_0975 0.19 -0.0
1,006,133 + B158DRAFT_0975 0.20 -0.1
1,006,133 + B158DRAFT_0975 0.20 -0.1
1,006,133 + B158DRAFT_0975 0.20 +2.7
1,006,133 + B158DRAFT_0975 0.20 +0.2
1,006,133 + B158DRAFT_0975 0.20 -0.0
1,006,135 + B158DRAFT_0975 0.20 +0.4
1,006,135 + B158DRAFT_0975 0.20 -0.4
1,006,135 + B158DRAFT_0975 0.20 -0.4
1,006,135 + B158DRAFT_0975 0.20 -0.7
1,006,135 + B158DRAFT_0975 0.20 +0.1
1,006,141 - B158DRAFT_0975 0.21 -0.6
1,006,141 - B158DRAFT_0975 0.21 -0.1
1,006,141 - B158DRAFT_0975 0.21 -0.6
1,006,141 - B158DRAFT_0975 0.21 +0.1
1,006,141 - B158DRAFT_0975 0.21 +0.2
1,006,143 - B158DRAFT_0975 0.21 -0.4
1,006,143 - B158DRAFT_0975 0.21 -0.1
1,006,143 - B158DRAFT_0975 0.21 -0.2
1,006,199 - B158DRAFT_0975 0.31 +0.5
1,006,214 + B158DRAFT_0975 0.33 +1.9
1,006,219 + B158DRAFT_0975 0.34 -0.7
1,006,227 - B158DRAFT_0975 0.35 -0.2
1,006,246 + B158DRAFT_0975 0.38 -0.3
1,006,254 - B158DRAFT_0975 0.40 -0.3
1,006,254 - B158DRAFT_0975 0.40 -0.0
1,006,259 - B158DRAFT_0975 0.40 +0.1
1,006,264 - B158DRAFT_0975 0.41 +0.2
1,006,287 + B158DRAFT_0975 0.45 +0.4
1,006,305 - B158DRAFT_0975 0.48 -0.3
1,006,307 + B158DRAFT_0975 0.48 +0.1
1,006,335 + B158DRAFT_0975 0.53 -1.1
1,006,338 - B158DRAFT_0975 0.53 +0.1
1,006,339 - B158DRAFT_0975 0.53 +0.3
1,006,379 + B158DRAFT_0975 0.60 -0.2
1,006,385 + B158DRAFT_0975 0.61 -0.7
1,006,394 - B158DRAFT_0975 0.62 -0.4
1,006,400 + B158DRAFT_0975 0.63 -0.8
1,006,411 - B158DRAFT_0975 0.65 +0.0
1,006,411 - B158DRAFT_0975 0.65 +0.0
1,006,428 + B158DRAFT_0975 0.68 -0.3
1,006,488 + B158DRAFT_0975 0.78 +0.2
1,006,645 + -0.2
1,006,653 + -0.1
1,006,653 + -0.5
1,006,653 - -0.6
1,006,694 + +0.1
1,006,694 + +0.4
1,006,702 - +0.6
1,006,702 - +0.0
1,006,739 + B158DRAFT_0976 0.17 +0.4
1,006,752 + B158DRAFT_0976 0.20 +0.4
1,006,758 + B158DRAFT_0976 0.21 -0.6
1,006,814 + B158DRAFT_0976 0.33 +0.4
1,006,822 + B158DRAFT_0976 0.35 -0.4
1,006,822 - B158DRAFT_0976 0.35 +0.5
1,006,858 + B158DRAFT_0976 0.42 +0.0
1,006,858 + B158DRAFT_0976 0.42 -0.3
1,006,866 - B158DRAFT_0976 0.44 -0.4
1,006,866 - B158DRAFT_0976 0.44 -1.0
1,006,866 - B158DRAFT_0976 0.44 +0.1
1,006,866 - B158DRAFT_0976 0.44 +0.0
1,006,877 + B158DRAFT_0976 0.46 -0.9
1,006,885 - B158DRAFT_0976 0.48 -0.3
1,006,963 + B158DRAFT_0976 0.64 -0.6
1,006,963 - B158DRAFT_0976 0.64 +0.1
1,006,970 - B158DRAFT_0976 0.66 -0.9
1,007,062 + B158DRAFT_0976 0.85 +0.2
1,007,090 + +0.2
1,007,178 - +0.2
1,007,184 - -0.0
1,007,231 + +0.1
1,007,231 + -0.2
1,007,239 - -0.4
1,007,270 - B158DRAFT_0977 0.12 +0.7
1,007,373 + B158DRAFT_0977 0.24 +0.3
1,007,376 + B158DRAFT_0977 0.25 +0.0
1,007,378 + B158DRAFT_0977 0.25 -0.4
1,007,378 + B158DRAFT_0977 0.25 -0.7
1,007,378 + B158DRAFT_0977 0.25 -0.0
1,007,378 + B158DRAFT_0977 0.25 -0.9
1,007,378 + B158DRAFT_0977 0.25 -0.4
1,007,381 - B158DRAFT_0977 0.25 -0.5
1,007,386 - B158DRAFT_0977 0.26 +0.1
1,007,386 - B158DRAFT_0977 0.26 +0.7
1,007,386 - B158DRAFT_0977 0.26 -0.5
1,007,386 - B158DRAFT_0977 0.26 -0.2
1,007,386 - B158DRAFT_0977 0.26 -0.1
1,007,386 - B158DRAFT_0977 0.26 +0.3
1,007,386 - B158DRAFT_0977 0.26 -0.7
1,007,386 - B158DRAFT_0977 0.26 -0.5
1,007,386 - B158DRAFT_0977 0.26 -1.3
1,007,386 - B158DRAFT_0977 0.26 +0.1
1,007,386 - B158DRAFT_0977 0.26 -0.4
1,007,424 - B158DRAFT_0977 0.30 +0.5
1,007,462 - B158DRAFT_0977 0.35 -0.7
1,007,478 - B158DRAFT_0977 0.37 +0.2
1,007,563 - B158DRAFT_0977 0.47 +0.1
1,007,567 + B158DRAFT_0977 0.48 -1.5
1,007,567 + B158DRAFT_0977 0.48 -0.9
1,007,572 + B158DRAFT_0977 0.48 -0.1
1,007,604 - B158DRAFT_0977 0.52 -0.1
1,007,606 + B158DRAFT_0977 0.52 -0.4
1,007,606 + B158DRAFT_0977 0.52 -0.3
1,007,606 + B158DRAFT_0977 0.52 -0.1
1,007,614 - B158DRAFT_0977 0.53 -0.9
1,007,614 - B158DRAFT_0977 0.53 +0.5
1,007,614 - B158DRAFT_0977 0.53 -0.6
1,007,614 - B158DRAFT_0977 0.53 -0.3

Or see this region's nucleotide sequence