Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0690

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0689 and B158DRAFT_0690 overlap by 1 nucleotidesB158DRAFT_0690 and B158DRAFT_0691 overlap by 1 nucleotides B158DRAFT_0689: B158DRAFT_0689 - general secretion pathway protein D, at 690,239 to 692,371 _0689 B158DRAFT_0690: B158DRAFT_0690 - general secretory pathway protein E, at 692,371 to 693,900 _0690 B158DRAFT_0691: B158DRAFT_0691 - general secretion pathway protein F, at 693,900 to 695,123 _0691 Position (kb) 692 693 694Strain fitness (log2 ratio) -3 -2 -1 0 1at 691.407 kb on - strand, within B158DRAFT_0689at 691.407 kb on - strand, within B158DRAFT_0689at 691.419 kb on + strand, within B158DRAFT_0689at 691.427 kb on - strand, within B158DRAFT_0689at 691.472 kb on - strand, within B158DRAFT_0689at 691.587 kb on + strand, within B158DRAFT_0689at 691.604 kb on + strand, within B158DRAFT_0689at 691.612 kb on - strand, within B158DRAFT_0689at 691.621 kb on - strand, within B158DRAFT_0689at 691.623 kb on + strand, within B158DRAFT_0689at 691.628 kb on + strand, within B158DRAFT_0689at 691.652 kb on - strand, within B158DRAFT_0689at 691.659 kb on + strand, within B158DRAFT_0689at 691.659 kb on + strand, within B158DRAFT_0689at 691.659 kb on + strand, within B158DRAFT_0689at 691.659 kb on + strand, within B158DRAFT_0689at 691.667 kb on - strand, within B158DRAFT_0689at 691.667 kb on - strand, within B158DRAFT_0689at 691.667 kb on - strand, within B158DRAFT_0689at 691.727 kb on + strand, within B158DRAFT_0689at 691.794 kb on + strand, within B158DRAFT_0689at 691.802 kb on - strand, within B158DRAFT_0689at 691.802 kb on - strand, within B158DRAFT_0689at 692.154 kb on + strand, within B158DRAFT_0689at 692.285 kb on - strandat 692.303 kb on + strandat 692.311 kb on - strandat 692.332 kb on + strandat 692.356 kb on + strandat 692.634 kb on + strand, within B158DRAFT_0690at 692.634 kb on + strand, within B158DRAFT_0690at 692.642 kb on + strand, within B158DRAFT_0690at 692.642 kb on - strand, within B158DRAFT_0690at 692.686 kb on + strand, within B158DRAFT_0690at 692.771 kb on + strand, within B158DRAFT_0690at 693.161 kb on + strand, within B158DRAFT_0690at 693.298 kb on - strand, within B158DRAFT_0690at 693.308 kb on - strand, within B158DRAFT_0690at 693.438 kb on - strand, within B158DRAFT_0690at 693.509 kb on - strand, within B158DRAFT_0690at 693.517 kb on - strand, within B158DRAFT_0690at 693.553 kb on + strand, within B158DRAFT_0690at 693.581 kb on - strand, within B158DRAFT_0690at 693.640 kb on - strand, within B158DRAFT_0690at 693.768 kb on + strandat 693.814 kb on - strandat 694.136 kb on + strand, within B158DRAFT_0691at 694.136 kb on + strand, within B158DRAFT_0691at 694.136 kb on + strand, within B158DRAFT_0691at 694.136 kb on + strand, within B158DRAFT_0691at 694.136 kb on + strand, within B158DRAFT_0691at 694.136 kb on + strand, within B158DRAFT_0691at 694.144 kb on - strand, within B158DRAFT_0691at 694.144 kb on - strand, within B158DRAFT_0691at 694.144 kb on - strand, within B158DRAFT_0691at 694.298 kb on + strand, within B158DRAFT_0691at 694.323 kb on - strand, within B158DRAFT_0691at 694.520 kb on - strand, within B158DRAFT_0691at 694.584 kb on + strand, within B158DRAFT_0691at 694.739 kb on - strand, within B158DRAFT_0691at 694.881 kb on - strand, within B158DRAFT_0691

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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691,407 - B158DRAFT_0689 0.55 -2.4
691,407 - B158DRAFT_0689 0.55 -1.0
691,419 + B158DRAFT_0689 0.55 -3.1
691,427 - B158DRAFT_0689 0.56 -1.6
691,472 - B158DRAFT_0689 0.58 -2.0
691,587 + B158DRAFT_0689 0.63 -1.7
691,604 + B158DRAFT_0689 0.64 -0.7
691,612 - B158DRAFT_0689 0.64 -0.7
691,621 - B158DRAFT_0689 0.65 +0.1
691,623 + B158DRAFT_0689 0.65 -1.9
691,628 + B158DRAFT_0689 0.65 -1.0
691,652 - B158DRAFT_0689 0.66 -1.3
691,659 + B158DRAFT_0689 0.67 -1.9
691,659 + B158DRAFT_0689 0.67 -2.4
691,659 + B158DRAFT_0689 0.67 -1.0
691,659 + B158DRAFT_0689 0.67 -0.3
691,667 - B158DRAFT_0689 0.67 -3.1
691,667 - B158DRAFT_0689 0.67 -1.0
691,667 - B158DRAFT_0689 0.67 -0.9
691,727 + B158DRAFT_0689 0.70 -1.5
691,794 + B158DRAFT_0689 0.73 -1.3
691,802 - B158DRAFT_0689 0.73 -1.5
691,802 - B158DRAFT_0689 0.73 -0.5
692,154 + B158DRAFT_0689 0.90 -0.3
692,285 - -2.1
692,303 + -1.0
692,311 - -1.5
692,332 + -1.5
692,356 + -0.9
692,634 + B158DRAFT_0690 0.17 -0.9
692,634 + B158DRAFT_0690 0.17 -0.3
692,642 + B158DRAFT_0690 0.18 -1.5
692,642 - B158DRAFT_0690 0.18 -1.1
692,686 + B158DRAFT_0690 0.21 -1.5
692,771 + B158DRAFT_0690 0.26 -1.5
693,161 + B158DRAFT_0690 0.52 -1.3
693,298 - B158DRAFT_0690 0.61 -1.7
693,308 - B158DRAFT_0690 0.61 -0.3
693,438 - B158DRAFT_0690 0.70 -2.0
693,509 - B158DRAFT_0690 0.74 +0.3
693,517 - B158DRAFT_0690 0.75 -0.7
693,553 + B158DRAFT_0690 0.77 -1.0
693,581 - B158DRAFT_0690 0.79 -0.7
693,640 - B158DRAFT_0690 0.83 -1.5
693,768 + -1.3
693,814 - -1.7
694,136 + B158DRAFT_0691 0.19 -2.9
694,136 + B158DRAFT_0691 0.19 -1.5
694,136 + B158DRAFT_0691 0.19 -2.8
694,136 + B158DRAFT_0691 0.19 -2.8
694,136 + B158DRAFT_0691 0.19 -1.0
694,136 + B158DRAFT_0691 0.19 -1.0
694,144 - B158DRAFT_0691 0.20 -1.7
694,144 - B158DRAFT_0691 0.20 -1.7
694,144 - B158DRAFT_0691 0.20 -1.6
694,298 + B158DRAFT_0691 0.33 -0.5
694,323 - B158DRAFT_0691 0.35 -1.1
694,520 - B158DRAFT_0691 0.51 -0.7
694,584 + B158DRAFT_0691 0.56 -0.7
694,739 - B158DRAFT_0691 0.69 -2.9
694,881 - B158DRAFT_0691 0.80 -2.4

Or see this region's nucleotide sequence