Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0685

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0683 and B158DRAFT_0684 are separated by 216 nucleotidesB158DRAFT_0684 and B158DRAFT_0685 are separated by 50 nucleotidesB158DRAFT_0685 and B158DRAFT_0686 overlap by 4 nucleotidesB158DRAFT_0686 and B158DRAFT_0687 are separated by 37 nucleotides B158DRAFT_0683: B158DRAFT_0683 - Transcriptional accessory protein, at 683,240 to 685,561 _0683 B158DRAFT_0684: B158DRAFT_0684 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 685,778 to 686,500 _0684 B158DRAFT_0685: B158DRAFT_0685 - Signal transduction histidine kinase, at 686,551 to 687,855 _0685 B158DRAFT_0686: B158DRAFT_0686 - Disulfide bond chaperones of the HSP33 family, at 687,852 to 688,724 _0686 B158DRAFT_0687: B158DRAFT_0687 - heat shock protein Hsp15, at 688,762 to 689,148 _0687 Position (kb) 686 687 688Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 685.599 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.649 kb on - strandat 685.654 kb on - strandat 685.657 kb on + strandat 685.665 kb on - strandat 685.665 kb on - strandat 685.841 kb on - strandat 685.856 kb on + strand, within B158DRAFT_0684at 685.905 kb on + strand, within B158DRAFT_0684at 686.042 kb on + strand, within B158DRAFT_0684at 686.061 kb on + strand, within B158DRAFT_0684at 686.073 kb on + strand, within B158DRAFT_0684at 686.089 kb on + strand, within B158DRAFT_0684at 686.097 kb on - strand, within B158DRAFT_0684at 686.133 kb on - strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.157 kb on - strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.197 kb on - strand, within B158DRAFT_0684at 686.213 kb on - strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.312 kb on - strand, within B158DRAFT_0684at 686.361 kb on + strand, within B158DRAFT_0684at 686.369 kb on - strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.400 kb on - strand, within B158DRAFT_0684at 686.413 kb on + strand, within B158DRAFT_0684at 686.452 kb on + strandat 686.452 kb on + strandat 686.461 kb on - strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.499 kb on + strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.510 kb on - strandat 686.585 kb on + strandat 686.585 kb on + strandat 686.683 kb on + strand, within B158DRAFT_0685at 686.805 kb on + strand, within B158DRAFT_0685at 686.810 kb on + strand, within B158DRAFT_0685at 686.824 kb on - strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.843 kb on + strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.896 kb on - strand, within B158DRAFT_0685at 686.990 kb on + strand, within B158DRAFT_0685at 687.087 kb on - strand, within B158DRAFT_0685at 687.184 kb on - strand, within B158DRAFT_0685at 687.194 kb on + strand, within B158DRAFT_0685at 687.224 kb on + strand, within B158DRAFT_0685at 687.232 kb on - strand, within B158DRAFT_0685at 687.280 kb on + strand, within B158DRAFT_0685at 687.288 kb on - strand, within B158DRAFT_0685at 687.288 kb on - strand, within B158DRAFT_0685at 687.295 kb on - strand, within B158DRAFT_0685at 687.325 kb on + strand, within B158DRAFT_0685at 687.339 kb on - strand, within B158DRAFT_0685at 687.343 kb on + strand, within B158DRAFT_0685at 687.387 kb on + strand, within B158DRAFT_0685at 687.472 kb on + strand, within B158DRAFT_0685at 687.492 kb on + strand, within B158DRAFT_0685at 687.497 kb on + strand, within B158DRAFT_0685at 687.624 kb on - strand, within B158DRAFT_0685at 687.726 kb on + strandat 687.728 kb on + strandat 687.742 kb on + strandat 687.750 kb on - strandat 687.750 kb on - strandat 687.780 kb on - strandat 687.840 kb on + strandat 687.883 kb on - strandat 687.995 kb on + strand, within B158DRAFT_0686at 687.995 kb on + strand, within B158DRAFT_0686at 687.995 kb on + strand, within B158DRAFT_0686at 688.019 kb on + strand, within B158DRAFT_0686at 688.047 kb on + strand, within B158DRAFT_0686at 688.086 kb on - strand, within B158DRAFT_0686at 688.099 kb on + strand, within B158DRAFT_0686at 688.109 kb on + strand, within B158DRAFT_0686at 688.112 kb on - strand, within B158DRAFT_0686at 688.124 kb on + strand, within B158DRAFT_0686at 688.124 kb on + strand, within B158DRAFT_0686at 688.125 kb on + strand, within B158DRAFT_0686at 688.125 kb on + strand, within B158DRAFT_0686at 688.133 kb on - strand, within B158DRAFT_0686at 688.133 kb on - strand, within B158DRAFT_0686at 688.133 kb on - strand, within B158DRAFT_0686at 688.133 kb on - strand, within B158DRAFT_0686at 688.133 kb on - strand, within B158DRAFT_0686at 688.180 kb on - strand, within B158DRAFT_0686at 688.210 kb on - strand, within B158DRAFT_0686at 688.266 kb on - strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.286 kb on + strand, within B158DRAFT_0686at 688.294 kb on - strand, within B158DRAFT_0686at 688.294 kb on - strand, within B158DRAFT_0686at 688.294 kb on - strand, within B158DRAFT_0686at 688.307 kb on + strand, within B158DRAFT_0686at 688.360 kb on + strand, within B158DRAFT_0686at 688.370 kb on + strand, within B158DRAFT_0686at 688.375 kb on + strand, within B158DRAFT_0686at 688.378 kb on - strand, within B158DRAFT_0686at 688.442 kb on + strand, within B158DRAFT_0686at 688.454 kb on + strand, within B158DRAFT_0686at 688.460 kb on - strand, within B158DRAFT_0686at 688.511 kb on + strand, within B158DRAFT_0686at 688.530 kb on + strand, within B158DRAFT_0686at 688.566 kb on + strand, within B158DRAFT_0686at 688.579 kb on - strand, within B158DRAFT_0686at 688.591 kb on + strand, within B158DRAFT_0686at 688.596 kb on - strand, within B158DRAFT_0686at 688.642 kb on + strandat 688.662 kb on + strandat 688.715 kb on + strandat 688.723 kb on - strandat 688.751 kb on + strandat 688.767 kb on - strandat 688.827 kb on + strand, within B158DRAFT_0687at 688.827 kb on + strand, within B158DRAFT_0687at 688.827 kb on - strand, within B158DRAFT_0687at 688.835 kb on - strand, within B158DRAFT_0687

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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685,599 + +0.8
685,646 + -0.8
685,646 + -0.6
685,646 + -0.8
685,646 + -0.7
685,646 + -0.1
685,649 - -4.0
685,654 - -2.1
685,657 + +0.3
685,665 - -2.2
685,665 - -4.1
685,841 - -2.3
685,856 + B158DRAFT_0684 0.11 -2.9
685,905 + B158DRAFT_0684 0.18 -4.4
686,042 + B158DRAFT_0684 0.37 -3.9
686,061 + B158DRAFT_0684 0.39 -3.6
686,073 + B158DRAFT_0684 0.41 -2.4
686,089 + B158DRAFT_0684 0.43 -4.4
686,097 - B158DRAFT_0684 0.44 -3.5
686,133 - B158DRAFT_0684 0.49 -5.0
686,135 + B158DRAFT_0684 0.49 -3.8
686,135 + B158DRAFT_0684 0.49 -3.3
686,157 - B158DRAFT_0684 0.52 -3.2
686,189 + B158DRAFT_0684 0.57 -3.5
686,189 + B158DRAFT_0684 0.57 -3.3
686,197 - B158DRAFT_0684 0.58 -3.1
686,213 - B158DRAFT_0684 0.60 -4.1
686,284 + B158DRAFT_0684 0.70 -3.0
686,284 + B158DRAFT_0684 0.70 -2.0
686,284 + B158DRAFT_0684 0.70 -3.2
686,284 + B158DRAFT_0684 0.70 -2.6
686,284 + B158DRAFT_0684 0.70 -2.4
686,284 + B158DRAFT_0684 0.70 -3.3
686,284 + B158DRAFT_0684 0.70 -3.9
686,284 + B158DRAFT_0684 0.70 -3.5
686,292 - B158DRAFT_0684 0.71 -1.5
686,292 - B158DRAFT_0684 0.71 -4.8
686,292 - B158DRAFT_0684 0.71 -3.7
686,292 - B158DRAFT_0684 0.71 -1.7
686,292 - B158DRAFT_0684 0.71 -4.2
686,292 - B158DRAFT_0684 0.71 -3.5
686,312 - B158DRAFT_0684 0.74 -3.5
686,361 + B158DRAFT_0684 0.81 -3.2
686,369 - B158DRAFT_0684 0.82 -3.9
686,379 + B158DRAFT_0684 0.83 -4.0
686,379 + B158DRAFT_0684 0.83 -3.0
686,379 + B158DRAFT_0684 0.83 -4.3
686,400 - B158DRAFT_0684 0.86 -3.3
686,413 + B158DRAFT_0684 0.88 -3.2
686,452 + -4.2
686,452 + -2.8
686,461 - -1.3
686,494 + -0.3
686,494 + +0.2
686,494 + -2.3
686,494 + +0.1
686,499 + +0.2
686,502 - -2.0
686,502 - -1.9
686,502 - -2.2
686,510 - -2.2
686,585 + -2.7
686,585 + -2.1
686,683 + B158DRAFT_0685 0.10 -1.9
686,805 + B158DRAFT_0685 0.19 -2.0
686,810 + B158DRAFT_0685 0.20 -2.0
686,824 - B158DRAFT_0685 0.21 -1.5
686,841 + B158DRAFT_0685 0.22 -2.9
686,841 + B158DRAFT_0685 0.22 -1.8
686,841 + B158DRAFT_0685 0.22 -3.6
686,841 + B158DRAFT_0685 0.22 -0.3
686,843 + B158DRAFT_0685 0.22 -2.5
686,849 - B158DRAFT_0685 0.23 -2.3
686,849 - B158DRAFT_0685 0.23 -1.0
686,849 - B158DRAFT_0685 0.23 -1.6
686,849 - B158DRAFT_0685 0.23 -2.4
686,849 - B158DRAFT_0685 0.23 -2.9
686,849 - B158DRAFT_0685 0.23 -3.3
686,876 + B158DRAFT_0685 0.25 -2.2
686,876 + B158DRAFT_0685 0.25 -1.9
686,876 + B158DRAFT_0685 0.25 -1.1
686,876 + B158DRAFT_0685 0.25 -1.3
686,876 + B158DRAFT_0685 0.25 -2.6
686,876 + B158DRAFT_0685 0.25 -2.8
686,876 + B158DRAFT_0685 0.25 -0.6
686,876 + B158DRAFT_0685 0.25 -1.3
686,876 + B158DRAFT_0685 0.25 -1.5
686,876 + B158DRAFT_0685 0.25 -1.9
686,876 + B158DRAFT_0685 0.25 -2.1
686,884 - B158DRAFT_0685 0.26 -1.6
686,884 - B158DRAFT_0685 0.26 -2.0
686,884 - B158DRAFT_0685 0.26 -1.6
686,884 - B158DRAFT_0685 0.26 -1.4
686,884 - B158DRAFT_0685 0.26 -1.6
686,884 - B158DRAFT_0685 0.26 -2.7
686,884 - B158DRAFT_0685 0.26 -2.3
686,884 - B158DRAFT_0685 0.26 -0.9
686,884 - B158DRAFT_0685 0.26 -2.4
686,884 - B158DRAFT_0685 0.26 -1.1
686,896 - B158DRAFT_0685 0.26 -2.7
686,990 + B158DRAFT_0685 0.34 -2.6
687,087 - B158DRAFT_0685 0.41 -1.7
687,184 - B158DRAFT_0685 0.49 -1.7
687,194 + B158DRAFT_0685 0.49 -2.3
687,224 + B158DRAFT_0685 0.52 -2.3
687,232 - B158DRAFT_0685 0.52 -2.4
687,280 + B158DRAFT_0685 0.56 -1.6
687,288 - B158DRAFT_0685 0.56 -2.8
687,288 - B158DRAFT_0685 0.56 -2.0
687,295 - B158DRAFT_0685 0.57 -3.4
687,325 + B158DRAFT_0685 0.59 -2.3
687,339 - B158DRAFT_0685 0.60 -1.9
687,343 + B158DRAFT_0685 0.61 +0.3
687,387 + B158DRAFT_0685 0.64 -4.1
687,472 + B158DRAFT_0685 0.71 -1.9
687,492 + B158DRAFT_0685 0.72 -3.5
687,497 + B158DRAFT_0685 0.72 -3.8
687,624 - B158DRAFT_0685 0.82 -1.2
687,726 + -3.0
687,728 + -3.9
687,742 + -2.6
687,750 - -3.3
687,750 - -2.1
687,780 - -2.6
687,840 + +0.3
687,883 - +0.7
687,995 + B158DRAFT_0686 0.16 +0.2
687,995 + B158DRAFT_0686 0.16 -0.1
687,995 + B158DRAFT_0686 0.16 -0.5
688,019 + B158DRAFT_0686 0.19 -0.2
688,047 + B158DRAFT_0686 0.22 +0.2
688,086 - B158DRAFT_0686 0.27 -0.4
688,099 + B158DRAFT_0686 0.28 +0.9
688,109 + B158DRAFT_0686 0.29 +0.2
688,112 - B158DRAFT_0686 0.30 +0.1
688,124 + B158DRAFT_0686 0.31 -0.2
688,124 + B158DRAFT_0686 0.31 -0.4
688,125 + B158DRAFT_0686 0.31 +0.5
688,125 + B158DRAFT_0686 0.31 -0.2
688,133 - B158DRAFT_0686 0.32 -0.4
688,133 - B158DRAFT_0686 0.32 +0.1
688,133 - B158DRAFT_0686 0.32 -0.4
688,133 - B158DRAFT_0686 0.32 -0.4
688,133 - B158DRAFT_0686 0.32 -0.1
688,180 - B158DRAFT_0686 0.38 -0.3
688,210 - B158DRAFT_0686 0.41 -0.3
688,266 - B158DRAFT_0686 0.47 -0.0
688,286 + B158DRAFT_0686 0.50 -0.6
688,286 + B158DRAFT_0686 0.50 -0.6
688,286 + B158DRAFT_0686 0.50 -0.5
688,286 + B158DRAFT_0686 0.50 -0.6
688,286 + B158DRAFT_0686 0.50 -0.0
688,286 + B158DRAFT_0686 0.50 -0.6
688,294 - B158DRAFT_0686 0.51 -0.3
688,294 - B158DRAFT_0686 0.51 -0.1
688,294 - B158DRAFT_0686 0.51 +0.9
688,307 + B158DRAFT_0686 0.52 +0.1
688,360 + B158DRAFT_0686 0.58 -0.4
688,370 + B158DRAFT_0686 0.59 +0.1
688,375 + B158DRAFT_0686 0.60 -0.3
688,378 - B158DRAFT_0686 0.60 -0.4
688,442 + B158DRAFT_0686 0.68 -0.1
688,454 + B158DRAFT_0686 0.69 -1.0
688,460 - B158DRAFT_0686 0.70 -0.9
688,511 + B158DRAFT_0686 0.75 -0.1
688,530 + B158DRAFT_0686 0.78 -0.2
688,566 + B158DRAFT_0686 0.82 -1.1
688,579 - B158DRAFT_0686 0.83 -0.2
688,591 + B158DRAFT_0686 0.85 +0.2
688,596 - B158DRAFT_0686 0.85 -0.3
688,642 + -0.2
688,662 + -0.1
688,715 + +0.1
688,723 - -0.4
688,751 + -0.1
688,767 - +0.2
688,827 + B158DRAFT_0687 0.17 -0.1
688,827 + B158DRAFT_0687 0.17 +0.0
688,827 - B158DRAFT_0687 0.17 -1.0
688,835 - B158DRAFT_0687 0.19 -0.2

Or see this region's nucleotide sequence