Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2460

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2459 and B158DRAFT_2460 overlap by 8 nucleotidesB158DRAFT_2460 and B158DRAFT_2461 overlap by 4 nucleotidesB158DRAFT_2461 and B158DRAFT_2462 are separated by 34 nucleotides B158DRAFT_2459: B158DRAFT_2459 - cystathionine gamma-synthase (EC 2.5.1.48), at 634,189 to 635,367 _2459 B158DRAFT_2460: B158DRAFT_2460 - aspartate kinase (EC 2.7.2.4), at 635,360 to 637,843 _2460 B158DRAFT_2461: B158DRAFT_2461 - 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20), at 637,840 to 638,766 _2461 B158DRAFT_2462: B158DRAFT_2462 - heavy metal efflux pump (cobalt-zinc-cadmium), at 638,801 to 641,929 _2462 Position (kb) 635 636 637 638Strain fitness (log2 ratio) -1 0 1at 634.368 kb on - strand, within B158DRAFT_2459at 634.382 kb on + strand, within B158DRAFT_2459at 634.436 kb on - strand, within B158DRAFT_2459at 634.482 kb on - strand, within B158DRAFT_2459at 634.509 kb on + strand, within B158DRAFT_2459at 634.557 kb on + strand, within B158DRAFT_2459at 634.560 kb on - strand, within B158DRAFT_2459at 634.565 kb on - strand, within B158DRAFT_2459at 634.631 kb on - strand, within B158DRAFT_2459at 634.806 kb on - strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.907 kb on + strand, within B158DRAFT_2459at 634.914 kb on - strand, within B158DRAFT_2459at 634.930 kb on - strand, within B158DRAFT_2459at 635.140 kb on - strand, within B158DRAFT_2459at 635.142 kb on + strand, within B158DRAFT_2459at 635.150 kb on - strand, within B158DRAFT_2459at 635.168 kb on - strand, within B158DRAFT_2459at 635.184 kb on + strand, within B158DRAFT_2459at 635.226 kb on + strand, within B158DRAFT_2459at 635.276 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.351 kb on - strandat 635.351 kb on - strandat 635.377 kb on + strandat 635.385 kb on - strandat 635.392 kb on + strandat 635.585 kb on + strandat 635.585 kb on + strandat 635.588 kb on - strandat 635.593 kb on - strandat 635.633 kb on - strand, within B158DRAFT_2460at 635.742 kb on + strand, within B158DRAFT_2460at 635.761 kb on + strand, within B158DRAFT_2460at 635.808 kb on + strand, within B158DRAFT_2460at 635.816 kb on - strand, within B158DRAFT_2460at 635.846 kb on - strand, within B158DRAFT_2460at 635.917 kb on - strand, within B158DRAFT_2460at 636.143 kb on - strand, within B158DRAFT_2460at 636.161 kb on + strand, within B158DRAFT_2460at 636.456 kb on + strand, within B158DRAFT_2460at 636.472 kb on + strand, within B158DRAFT_2460at 636.528 kb on - strand, within B158DRAFT_2460at 636.560 kb on + strand, within B158DRAFT_2460at 636.926 kb on + strand, within B158DRAFT_2460at 637.020 kb on + strand, within B158DRAFT_2460at 637.389 kb on - strand, within B158DRAFT_2460at 637.398 kb on + strand, within B158DRAFT_2460at 637.575 kb on + strand, within B158DRAFT_2460at 637.575 kb on + strand, within B158DRAFT_2460at 637.744 kb on + strandat 637.746 kb on - strandat 638.071 kb on - strand, within B158DRAFT_2461at 638.179 kb on - strand, within B158DRAFT_2461at 638.266 kb on - strand, within B158DRAFT_2461at 638.318 kb on + strand, within B158DRAFT_2461at 638.456 kb on - strand, within B158DRAFT_2461at 638.587 kb on - strand, within B158DRAFT_2461at 638.608 kb on - strand, within B158DRAFT_2461at 638.614 kb on - strand, within B158DRAFT_2461at 638.643 kb on + strand, within B158DRAFT_2461at 638.682 kb on + strandat 638.697 kb on - strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.704 kb on + strandat 638.707 kb on - strandat 638.707 kb on - strandat 638.707 kb on - strandat 638.707 kb on - strandat 638.712 kb on - strandat 638.712 kb on - strandat 638.712 kb on - strandat 638.712 kb on - strandat 638.773 kb on + strandat 638.804 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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634,368 - B158DRAFT_2459 0.15 +0.4
634,382 + B158DRAFT_2459 0.16 -0.1
634,436 - B158DRAFT_2459 0.21 -0.0
634,482 - B158DRAFT_2459 0.25 -0.4
634,509 + B158DRAFT_2459 0.27 +0.1
634,557 + B158DRAFT_2459 0.31 -0.1
634,560 - B158DRAFT_2459 0.31 -0.3
634,565 - B158DRAFT_2459 0.32 -0.3
634,631 - B158DRAFT_2459 0.37 -1.1
634,806 - B158DRAFT_2459 0.52 +0.1
634,865 + B158DRAFT_2459 0.57 -1.2
634,865 + B158DRAFT_2459 0.57 -0.2
634,865 + B158DRAFT_2459 0.57 -0.0
634,865 + B158DRAFT_2459 0.57 +0.2
634,865 + B158DRAFT_2459 0.57 -0.1
634,873 - B158DRAFT_2459 0.58 +0.1
634,873 - B158DRAFT_2459 0.58 -0.2
634,873 - B158DRAFT_2459 0.58 +0.4
634,873 - B158DRAFT_2459 0.58 -0.6
634,907 + B158DRAFT_2459 0.61 -0.5
634,914 - B158DRAFT_2459 0.61 -0.1
634,930 - B158DRAFT_2459 0.63 +0.0
635,140 - B158DRAFT_2459 0.81 -0.4
635,142 + B158DRAFT_2459 0.81 -0.4
635,150 - B158DRAFT_2459 0.82 +0.2
635,168 - B158DRAFT_2459 0.83 -0.2
635,184 + B158DRAFT_2459 0.84 -0.8
635,226 + B158DRAFT_2459 0.88 -0.3
635,276 + -0.4
635,343 + -0.5
635,343 + +0.1
635,343 + -0.1
635,343 + -0.6
635,343 + +0.6
635,351 - -0.3
635,351 - +0.1
635,377 + -0.8
635,385 - -0.5
635,392 + -1.0
635,585 + +0.2
635,585 + -0.9
635,588 - -0.2
635,593 - -0.9
635,633 - B158DRAFT_2460 0.11 -0.3
635,742 + B158DRAFT_2460 0.15 +0.2
635,761 + B158DRAFT_2460 0.16 -0.1
635,808 + B158DRAFT_2460 0.18 -1.3
635,816 - B158DRAFT_2460 0.18 +0.5
635,846 - B158DRAFT_2460 0.20 +0.0
635,917 - B158DRAFT_2460 0.22 +0.1
636,143 - B158DRAFT_2460 0.32 -0.8
636,161 + B158DRAFT_2460 0.32 +0.3
636,456 + B158DRAFT_2460 0.44 +0.0
636,472 + B158DRAFT_2460 0.45 -0.2
636,528 - B158DRAFT_2460 0.47 -0.5
636,560 + B158DRAFT_2460 0.48 -0.3
636,926 + B158DRAFT_2460 0.63 -0.2
637,020 + B158DRAFT_2460 0.67 -0.2
637,389 - B158DRAFT_2460 0.82 -0.1
637,398 + B158DRAFT_2460 0.82 +0.2
637,575 + B158DRAFT_2460 0.89 +0.8
637,575 + B158DRAFT_2460 0.89 -0.4
637,744 + +0.1
637,746 - -0.6
638,071 - B158DRAFT_2461 0.25 -0.2
638,179 - B158DRAFT_2461 0.37 -0.7
638,266 - B158DRAFT_2461 0.46 +0.2
638,318 + B158DRAFT_2461 0.52 -0.9
638,456 - B158DRAFT_2461 0.66 -0.5
638,587 - B158DRAFT_2461 0.81 -0.6
638,608 - B158DRAFT_2461 0.83 +0.0
638,614 - B158DRAFT_2461 0.83 -0.1
638,643 + B158DRAFT_2461 0.87 -0.4
638,682 + +0.1
638,697 - -0.2
638,704 + -0.4
638,704 + +0.1
638,704 + -0.3
638,704 + -0.9
638,704 + +0.2
638,704 + +0.2
638,704 + +0.3
638,704 + -0.6
638,704 + +0.1
638,704 + -0.6
638,707 - +0.7
638,707 - +0.5
638,707 - +0.1
638,707 - -1.1
638,712 - +0.3
638,712 - -0.7
638,712 - -0.3
638,712 - -0.1
638,773 + -0.3
638,804 + +0.0

Or see this region's nucleotide sequence