Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2324

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2322 and B158DRAFT_2323 are separated by 71 nucleotidesB158DRAFT_2323 and B158DRAFT_2324 are separated by 60 nucleotidesB158DRAFT_2324 and B158DRAFT_2325 are separated by 218 nucleotides B158DRAFT_2322: B158DRAFT_2322 - phosphoserine aminotransferase apoenzyme (EC 2.6.1.52), at 488,297 to 489,382 _2322 B158DRAFT_2323: B158DRAFT_2323 - Uncharacterized protein conserved in bacteria, at 489,454 to 489,762 _2323 B158DRAFT_2324: B158DRAFT_2324 - Protease II, at 489,823 to 492,027 _2324 B158DRAFT_2325: B158DRAFT_2325 - histidinol-phosphate aminotransferase, at 492,246 to 493,346 _2325 Position (kb) 489 490 491 492 493Strain fitness (log2 ratio) -2 -1 0 1at 489.438 kb on + strandat 489.555 kb on + strand, within B158DRAFT_2323at 489.692 kb on + strand, within B158DRAFT_2323at 489.692 kb on + strand, within B158DRAFT_2323at 489.864 kb on + strandat 489.907 kb on + strandat 489.915 kb on - strandat 489.915 kb on - strandat 489.915 kb on - strandat 489.917 kb on + strandat 489.925 kb on - strandat 489.929 kb on + strandat 490.001 kb on - strandat 490.023 kb on + strandat 490.023 kb on + strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.103 kb on - strand, within B158DRAFT_2324at 490.131 kb on + strand, within B158DRAFT_2324at 490.155 kb on + strand, within B158DRAFT_2324at 490.155 kb on + strand, within B158DRAFT_2324at 490.204 kb on + strand, within B158DRAFT_2324at 490.250 kb on + strand, within B158DRAFT_2324at 490.270 kb on + strand, within B158DRAFT_2324at 490.280 kb on + strand, within B158DRAFT_2324at 490.288 kb on + strand, within B158DRAFT_2324at 490.288 kb on - strand, within B158DRAFT_2324at 490.405 kb on + strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.415 kb on + strand, within B158DRAFT_2324at 490.415 kb on + strand, within B158DRAFT_2324at 490.423 kb on - strand, within B158DRAFT_2324at 490.437 kb on + strand, within B158DRAFT_2324at 490.450 kb on + strand, within B158DRAFT_2324at 490.592 kb on - strand, within B158DRAFT_2324at 490.624 kb on - strand, within B158DRAFT_2324at 490.721 kb on - strand, within B158DRAFT_2324at 490.737 kb on + strand, within B158DRAFT_2324at 490.790 kb on + strand, within B158DRAFT_2324at 490.798 kb on - strand, within B158DRAFT_2324at 490.803 kb on + strand, within B158DRAFT_2324at 490.811 kb on - strand, within B158DRAFT_2324at 490.811 kb on - strand, within B158DRAFT_2324at 490.863 kb on + strand, within B158DRAFT_2324at 490.871 kb on - strand, within B158DRAFT_2324at 490.886 kb on + strand, within B158DRAFT_2324at 490.930 kb on + strand, within B158DRAFT_2324at 490.961 kb on + strand, within B158DRAFT_2324at 490.973 kb on + strand, within B158DRAFT_2324at 490.997 kb on + strand, within B158DRAFT_2324at 491.028 kb on + strand, within B158DRAFT_2324at 491.057 kb on + strand, within B158DRAFT_2324at 491.073 kb on - strand, within B158DRAFT_2324at 491.084 kb on + strand, within B158DRAFT_2324at 491.084 kb on + strand, within B158DRAFT_2324at 491.092 kb on - strand, within B158DRAFT_2324at 491.092 kb on - strand, within B158DRAFT_2324at 491.092 kb on - strand, within B158DRAFT_2324at 491.092 kb on - strand, within B158DRAFT_2324at 491.092 kb on - strand, within B158DRAFT_2324at 491.109 kb on + strand, within B158DRAFT_2324at 491.111 kb on + strand, within B158DRAFT_2324at 491.148 kb on + strand, within B158DRAFT_2324at 491.153 kb on + strand, within B158DRAFT_2324at 491.158 kb on + strand, within B158DRAFT_2324at 491.197 kb on + strand, within B158DRAFT_2324at 491.200 kb on - strand, within B158DRAFT_2324at 491.200 kb on - strand, within B158DRAFT_2324at 491.200 kb on - strand, within B158DRAFT_2324at 491.205 kb on - strand, within B158DRAFT_2324at 491.259 kb on - strand, within B158DRAFT_2324at 491.269 kb on - strand, within B158DRAFT_2324at 491.300 kb on - strand, within B158DRAFT_2324at 491.300 kb on - strand, within B158DRAFT_2324at 491.399 kb on - strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.409 kb on - strand, within B158DRAFT_2324at 491.422 kb on + strand, within B158DRAFT_2324at 491.448 kb on + strand, within B158DRAFT_2324at 491.448 kb on + strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.458 kb on + strand, within B158DRAFT_2324at 491.498 kb on + strand, within B158DRAFT_2324at 491.537 kb on - strand, within B158DRAFT_2324at 491.665 kb on - strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.719 kb on - strand, within B158DRAFT_2324at 491.719 kb on - strand, within B158DRAFT_2324at 491.721 kb on - strand, within B158DRAFT_2324at 491.781 kb on - strand, within B158DRAFT_2324at 491.804 kb on + strand, within B158DRAFT_2324at 491.812 kb on - strandat 491.817 kb on - strandat 491.889 kb on - strandat 491.903 kb on + strandat 491.925 kb on + strandat 491.933 kb on - strandat 491.933 kb on - strandat 491.979 kb on + strandat 491.989 kb on + strandat 491.994 kb on + strandat 491.997 kb on - strandat 492.010 kb on + strandat 492.018 kb on - strandat 492.018 kb on - strandat 492.018 kb on - strandat 492.078 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.124 kb on - strandat 492.124 kb on - strandat 492.124 kb on - strandat 492.143 kb on - strandat 492.166 kb on + strandat 492.217 kb on + strandat 492.394 kb on + strand, within B158DRAFT_2325at 492.440 kb on + strand, within B158DRAFT_2325at 492.957 kb on + strand, within B158DRAFT_2325

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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489,438 + -0.5
489,555 + B158DRAFT_2323 0.33 +0.1
489,692 + B158DRAFT_2323 0.77 -0.1
489,692 + B158DRAFT_2323 0.77 -0.3
489,864 + -0.1
489,907 + +0.3
489,915 - +0.1
489,915 - -0.5
489,915 - -1.4
489,917 + -0.5
489,925 - -1.0
489,929 + +0.2
490,001 - -0.5
490,023 + -1.0
490,023 + -0.6
490,031 - -0.1
490,031 - +0.1
490,031 - -0.1
490,031 - -0.3
490,051 + B158DRAFT_2324 0.10 -0.5
490,051 + B158DRAFT_2324 0.10 -0.1
490,051 + B158DRAFT_2324 0.10 -0.0
490,051 + B158DRAFT_2324 0.10 -0.4
490,051 + B158DRAFT_2324 0.10 +0.9
490,051 + B158DRAFT_2324 0.10 +0.0
490,051 + B158DRAFT_2324 0.10 -0.5
490,051 + B158DRAFT_2324 0.10 -0.6
490,051 + B158DRAFT_2324 0.10 -0.2
490,051 + B158DRAFT_2324 0.10 +0.2
490,051 + B158DRAFT_2324 0.10 -0.4
490,059 - B158DRAFT_2324 0.11 -0.6
490,059 - B158DRAFT_2324 0.11 +0.1
490,059 - B158DRAFT_2324 0.11 +0.0
490,059 - B158DRAFT_2324 0.11 -0.3
490,059 - B158DRAFT_2324 0.11 +0.1
490,059 - B158DRAFT_2324 0.11 +0.2
490,059 - B158DRAFT_2324 0.11 -0.4
490,059 - B158DRAFT_2324 0.11 -0.8
490,059 - B158DRAFT_2324 0.11 -0.3
490,069 + B158DRAFT_2324 0.11 -0.8
490,069 + B158DRAFT_2324 0.11 -0.0
490,069 + B158DRAFT_2324 0.11 -0.3
490,077 - B158DRAFT_2324 0.12 -0.5
490,077 - B158DRAFT_2324 0.12 -0.3
490,077 - B158DRAFT_2324 0.12 +0.1
490,103 - B158DRAFT_2324 0.13 -0.2
490,131 + B158DRAFT_2324 0.14 -0.4
490,155 + B158DRAFT_2324 0.15 -0.7
490,155 + B158DRAFT_2324 0.15 +0.4
490,204 + B158DRAFT_2324 0.17 -0.5
490,250 + B158DRAFT_2324 0.19 -0.0
490,270 + B158DRAFT_2324 0.20 -0.4
490,280 + B158DRAFT_2324 0.21 +0.2
490,288 + B158DRAFT_2324 0.21 -0.9
490,288 - B158DRAFT_2324 0.21 +0.2
490,405 + B158DRAFT_2324 0.26 +0.8
490,413 - B158DRAFT_2324 0.27 -0.3
490,413 - B158DRAFT_2324 0.27 -0.2
490,413 - B158DRAFT_2324 0.27 +0.0
490,413 - B158DRAFT_2324 0.27 -0.0
490,413 - B158DRAFT_2324 0.27 +0.3
490,413 - B158DRAFT_2324 0.27 -0.2
490,415 + B158DRAFT_2324 0.27 +0.5
490,415 + B158DRAFT_2324 0.27 -0.0
490,423 - B158DRAFT_2324 0.27 -0.3
490,437 + B158DRAFT_2324 0.28 -0.3
490,450 + B158DRAFT_2324 0.28 +0.0
490,592 - B158DRAFT_2324 0.35 -1.0
490,624 - B158DRAFT_2324 0.36 -0.2
490,721 - B158DRAFT_2324 0.41 -0.0
490,737 + B158DRAFT_2324 0.41 -0.5
490,790 + B158DRAFT_2324 0.44 +0.3
490,798 - B158DRAFT_2324 0.44 -1.4
490,803 + B158DRAFT_2324 0.44 -0.4
490,811 - B158DRAFT_2324 0.45 -0.8
490,811 - B158DRAFT_2324 0.45 -0.5
490,863 + B158DRAFT_2324 0.47 -0.4
490,871 - B158DRAFT_2324 0.48 -1.9
490,886 + B158DRAFT_2324 0.48 -0.0
490,930 + B158DRAFT_2324 0.50 -0.1
490,961 + B158DRAFT_2324 0.52 -0.3
490,973 + B158DRAFT_2324 0.52 -0.3
490,997 + B158DRAFT_2324 0.53 +0.0
491,028 + B158DRAFT_2324 0.55 +0.2
491,057 + B158DRAFT_2324 0.56 -0.4
491,073 - B158DRAFT_2324 0.57 -0.0
491,084 + B158DRAFT_2324 0.57 -0.7
491,084 + B158DRAFT_2324 0.57 -0.6
491,092 - B158DRAFT_2324 0.58 -0.1
491,092 - B158DRAFT_2324 0.58 -0.5
491,092 - B158DRAFT_2324 0.58 -0.5
491,092 - B158DRAFT_2324 0.58 -1.0
491,092 - B158DRAFT_2324 0.58 -0.4
491,109 + B158DRAFT_2324 0.58 -1.8
491,111 + B158DRAFT_2324 0.58 +0.0
491,148 + B158DRAFT_2324 0.60 -0.5
491,153 + B158DRAFT_2324 0.60 -0.1
491,158 + B158DRAFT_2324 0.61 +0.2
491,197 + B158DRAFT_2324 0.62 -0.9
491,200 - B158DRAFT_2324 0.62 +0.3
491,200 - B158DRAFT_2324 0.62 -0.5
491,200 - B158DRAFT_2324 0.62 -0.1
491,205 - B158DRAFT_2324 0.63 -1.0
491,259 - B158DRAFT_2324 0.65 +0.7
491,269 - B158DRAFT_2324 0.66 -0.3
491,300 - B158DRAFT_2324 0.67 -0.4
491,300 - B158DRAFT_2324 0.67 +0.2
491,399 - B158DRAFT_2324 0.71 +0.0
491,401 + B158DRAFT_2324 0.72 -0.2
491,401 + B158DRAFT_2324 0.72 +0.4
491,401 + B158DRAFT_2324 0.72 -0.0
491,401 + B158DRAFT_2324 0.72 -0.1
491,409 - B158DRAFT_2324 0.72 -0.5
491,422 + B158DRAFT_2324 0.73 -0.3
491,448 + B158DRAFT_2324 0.74 -0.3
491,448 + B158DRAFT_2324 0.74 -0.2
491,456 - B158DRAFT_2324 0.74 -0.6
491,456 - B158DRAFT_2324 0.74 -0.5
491,456 - B158DRAFT_2324 0.74 -0.2
491,458 + B158DRAFT_2324 0.74 -0.9
491,498 + B158DRAFT_2324 0.76 -0.3
491,537 - B158DRAFT_2324 0.78 -0.2
491,665 - B158DRAFT_2324 0.84 -0.6
491,711 + B158DRAFT_2324 0.86 -0.6
491,711 + B158DRAFT_2324 0.86 -0.9
491,711 + B158DRAFT_2324 0.86 +0.0
491,719 - B158DRAFT_2324 0.86 -0.5
491,719 - B158DRAFT_2324 0.86 -0.0
491,721 - B158DRAFT_2324 0.86 -0.4
491,781 - B158DRAFT_2324 0.89 -1.3
491,804 + B158DRAFT_2324 0.90 +0.1
491,812 - +0.1
491,817 - +0.2
491,889 - -0.9
491,903 + -0.4
491,925 + -0.1
491,933 - -0.2
491,933 - -1.5
491,979 + -0.7
491,989 + -0.3
491,994 + -0.0
491,997 - +0.0
492,010 + -1.4
492,018 - +0.0
492,018 - -0.6
492,018 - -0.6
492,078 + -0.1
492,116 + -0.2
492,116 + -0.2
492,116 + -0.0
492,116 + -0.3
492,116 + -0.3
492,116 + -0.3
492,124 - -0.2
492,124 - +0.4
492,124 - -0.5
492,143 - -0.3
492,166 + -0.3
492,217 + -0.1
492,394 + B158DRAFT_2325 0.13 -1.0
492,440 + B158DRAFT_2325 0.18 -1.5
492,957 + B158DRAFT_2325 0.65 -1.1

Or see this region's nucleotide sequence