Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1601 and B158DRAFT_1602 are separated by 30 nucleotides B158DRAFT_1602 and B158DRAFT_1603 are separated by 91 nucleotides B158DRAFT_1603 and B158DRAFT_1604 are separated by 119 nucleotides
B158DRAFT_1601: B158DRAFT_1601 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 1,660,916 to 1,661,686
_1601
B158DRAFT_1602: B158DRAFT_1602 - Protein-tyrosine-phosphatase, at 1,661,717 to 1,662,202
_1602
B158DRAFT_1603: B158DRAFT_1603 - arginyl-tRNA synthetase (EC 6.1.1.19), at 1,662,294 to 1,664,060
_1603
B158DRAFT_1604: B158DRAFT_1604 - succinate-semialdehyde dehydrogenase, at 1,664,180 to 1,665,613
_1604
Position (kb)
1662
1663
1664
1665 Strain fitness (log2 ratio)
-2
-1
0
1 at 1661.644 kb on + strand at 1661.670 kb on - strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.749 kb on + strand at 1661.749 kb on + strand at 1661.755 kb on + strand at 1661.757 kb on - strand at 1661.780 kb on - strand, within B158DRAFT_1602 at 1661.818 kb on - strand, within B158DRAFT_1602 at 1661.828 kb on - strand, within B158DRAFT_1602 at 1661.850 kb on + strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.877 kb on + strand, within B158DRAFT_1602 at 1661.885 kb on - strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.936 kb on + strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.941 kb on + strand, within B158DRAFT_1602 at 1661.942 kb on - strand, within B158DRAFT_1602 at 1661.974 kb on + strand, within B158DRAFT_1602 at 1661.982 kb on - strand, within B158DRAFT_1602 at 1662.007 kb on - strand, within B158DRAFT_1602 at 1662.024 kb on - strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on - strand, within B158DRAFT_1602 at 1662.111 kb on - strand, within B158DRAFT_1602 at 1662.148 kb on + strand, within B158DRAFT_1602 at 1662.156 kb on - strand at 1662.156 kb on - strand at 1662.170 kb on - strand at 1662.227 kb on + strand at 1662.236 kb on + strand at 1662.236 kb on + strand at 1664.084 kb on + strand at 1664.101 kb on + strand at 1664.101 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.103 kb on + strand at 1664.109 kb on - strand at 1664.109 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.111 kb on - strand at 1664.195 kb on + strand at 1664.276 kb on - strand at 1664.308 kb on - strand at 1664.331 kb on - strand, within B158DRAFT_1604 at 1664.333 kb on + strand, within B158DRAFT_1604 at 1664.335 kb on + strand, within B158DRAFT_1604 at 1664.367 kb on - strand, within B158DRAFT_1604 at 1664.372 kb on + strand, within B158DRAFT_1604 at 1664.382 kb on + strand, within B158DRAFT_1604 at 1664.390 kb on + strand, within B158DRAFT_1604 at 1664.390 kb on - strand, within B158DRAFT_1604 at 1664.398 kb on - strand, within B158DRAFT_1604 at 1664.400 kb on + strand, within B158DRAFT_1604 at 1664.453 kb on + strand, within B158DRAFT_1604 at 1664.453 kb on + strand, within B158DRAFT_1604 at 1664.458 kb on + strand, within B158DRAFT_1604 at 1664.458 kb on + strand, within B158DRAFT_1604 at 1664.458 kb on + strand, within B158DRAFT_1604 at 1664.458 kb on + strand, within B158DRAFT_1604 at 1664.458 kb on + strand, within B158DRAFT_1604 at 1664.461 kb on - strand, within B158DRAFT_1604 at 1664.461 kb on - strand, within B158DRAFT_1604 at 1664.461 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on + strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.466 kb on - strand, within B158DRAFT_1604 at 1664.516 kb on - strand, within B158DRAFT_1604 at 1664.539 kb on - strand, within B158DRAFT_1604 at 1664.627 kb on + strand, within B158DRAFT_1604 at 1664.627 kb on + strand, within B158DRAFT_1604 at 1664.635 kb on - strand, within B158DRAFT_1604 at 1664.661 kb on + strand, within B158DRAFT_1604 at 1664.683 kb on + strand, within B158DRAFT_1604 at 1664.698 kb on + strand, within B158DRAFT_1604 at 1664.706 kb on - strand, within B158DRAFT_1604 at 1664.727 kb on - strand, within B158DRAFT_1604 at 1664.729 kb on + strand, within B158DRAFT_1604 at 1664.729 kb on + strand, within B158DRAFT_1604 at 1664.734 kb on + strand, within B158DRAFT_1604 at 1664.742 kb on - strand, within B158DRAFT_1604 at 1664.747 kb on - strand, within B158DRAFT_1604 at 1664.789 kb on + strand, within B158DRAFT_1604 at 1664.796 kb on + strand, within B158DRAFT_1604 at 1664.806 kb on - strand, within B158DRAFT_1604 at 1664.830 kb on - strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.835 kb on + strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.843 kb on - strand, within B158DRAFT_1604 at 1664.885 kb on + strand, within B158DRAFT_1604 at 1664.903 kb on + strand, within B158DRAFT_1604 at 1664.911 kb on - strand, within B158DRAFT_1604 at 1664.972 kb on + strand, within B158DRAFT_1604 at 1664.980 kb on - strand, within B158DRAFT_1604 at 1664.995 kb on - strand, within B158DRAFT_1604 at 1664.995 kb on - strand, within B158DRAFT_1604 at 1665.023 kb on + strand, within B158DRAFT_1604 at 1665.023 kb on + strand, within B158DRAFT_1604 at 1665.037 kb on - strand, within B158DRAFT_1604 at 1665.050 kb on + strand, within B158DRAFT_1604
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,661,644 + -2.7 1,661,670 - -0.4 1,661,708 + +0.2 1,661,708 + +0.1 1,661,708 + +0.3 1,661,708 + -0.4 1,661,708 + -0.5 1,661,708 + +0.7 1,661,708 + -0.1 1,661,708 + -0.2 1,661,708 + +0.1 1,661,716 - -0.3 1,661,716 - -0.6 1,661,716 - +0.1 1,661,749 + -0.3 1,661,749 + -0.4 1,661,755 + -0.5 1,661,757 - -0.8 1,661,780 - B158DRAFT_1602 0.13 +0.3 1,661,818 - B158DRAFT_1602 0.21 +0.1 1,661,828 - B158DRAFT_1602 0.23 -0.8 1,661,850 + B158DRAFT_1602 0.27 -0.5 1,661,853 - B158DRAFT_1602 0.28 -0.2 1,661,853 - B158DRAFT_1602 0.28 +0.1 1,661,877 + B158DRAFT_1602 0.33 -0.5 1,661,885 - B158DRAFT_1602 0.35 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,909 + B158DRAFT_1602 0.40 -0.2 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -1.7 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,909 + B158DRAFT_1602 0.40 +0.5 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -0.5 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -0.8 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -1.0 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 +0.3 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,917 - B158DRAFT_1602 0.41 -1.5 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,917 - B158DRAFT_1602 0.41 +0.4 1,661,917 - B158DRAFT_1602 0.41 +0.0 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.0 1,661,917 - B158DRAFT_1602 0.41 +0.3 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.8 1,661,917 - B158DRAFT_1602 0.41 -0.8 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,931 + B158DRAFT_1602 0.44 +0.1 1,661,931 + B158DRAFT_1602 0.44 -0.7 1,661,931 + B158DRAFT_1602 0.44 -0.3 1,661,936 + B158DRAFT_1602 0.45 -0.3 1,661,939 - B158DRAFT_1602 0.46 -0.5 1,661,939 - B158DRAFT_1602 0.46 -1.2 1,661,939 - B158DRAFT_1602 0.46 +0.1 1,661,939 - B158DRAFT_1602 0.46 -0.0 1,661,941 + B158DRAFT_1602 0.46 -0.4 1,661,942 - B158DRAFT_1602 0.46 +0.2 1,661,974 + B158DRAFT_1602 0.53 +0.3 1,661,982 - B158DRAFT_1602 0.55 -1.2 1,662,007 - B158DRAFT_1602 0.60 -0.7 1,662,024 - B158DRAFT_1602 0.63 -0.2 1,662,103 + B158DRAFT_1602 0.79 -0.0 1,662,103 + B158DRAFT_1602 0.79 +0.0 1,662,103 - B158DRAFT_1602 0.79 +0.8 1,662,111 - B158DRAFT_1602 0.81 -0.4 1,662,148 + B158DRAFT_1602 0.89 -0.6 1,662,156 - -0.4 1,662,156 - +0.4 1,662,170 - -0.2 1,662,227 + -0.4 1,662,236 + -0.2 1,662,236 + +0.4 1,664,084 + -0.5 1,664,101 + -0.7 1,664,101 + -0.4 1,664,103 + +0.6 1,664,103 + -0.2 1,664,103 + -0.3 1,664,103 + +0.2 1,664,103 + +0.9 1,664,103 + -0.9 1,664,103 + -0.1 1,664,103 + -0.2 1,664,103 + -0.4 1,664,103 + +0.4 1,664,103 + +1.4 1,664,109 - -0.3 1,664,109 - -1.1 1,664,111 - -0.3 1,664,111 - +0.1 1,664,111 - +0.6 1,664,111 - +0.5 1,664,111 - -0.1 1,664,111 - -0.1 1,664,111 - +0.2 1,664,111 - -0.5 1,664,111 - +0.4 1,664,111 - +0.4 1,664,195 + -0.3 1,664,276 - -0.0 1,664,308 - +0.1 1,664,331 - B158DRAFT_1604 0.11 -0.3 1,664,333 + B158DRAFT_1604 0.11 +0.5 1,664,335 + B158DRAFT_1604 0.11 -0.7 1,664,367 - B158DRAFT_1604 0.13 -0.2 1,664,372 + B158DRAFT_1604 0.13 +0.3 1,664,382 + B158DRAFT_1604 0.14 -0.0 1,664,390 + B158DRAFT_1604 0.15 -0.1 1,664,390 - B158DRAFT_1604 0.15 -0.4 1,664,398 - B158DRAFT_1604 0.15 +0.2 1,664,400 + B158DRAFT_1604 0.15 -0.3 1,664,453 + B158DRAFT_1604 0.19 -0.3 1,664,453 + B158DRAFT_1604 0.19 -0.2 1,664,458 + B158DRAFT_1604 0.19 -0.5 1,664,458 + B158DRAFT_1604 0.19 -1.6 1,664,458 + B158DRAFT_1604 0.19 -0.3 1,664,458 + B158DRAFT_1604 0.19 +0.2 1,664,458 + B158DRAFT_1604 0.19 -0.4 1,664,461 - B158DRAFT_1604 0.20 +0.4 1,664,461 - B158DRAFT_1604 0.20 -0.3 1,664,461 - B158DRAFT_1604 0.20 +0.2 1,664,466 + B158DRAFT_1604 0.20 -1.1 1,664,466 - B158DRAFT_1604 0.20 -0.7 1,664,466 - B158DRAFT_1604 0.20 +0.3 1,664,466 - B158DRAFT_1604 0.20 +0.3 1,664,466 - B158DRAFT_1604 0.20 -0.2 1,664,466 - B158DRAFT_1604 0.20 +0.1 1,664,466 - B158DRAFT_1604 0.20 -0.5 1,664,516 - B158DRAFT_1604 0.23 +0.3 1,664,539 - B158DRAFT_1604 0.25 +0.1 1,664,627 + B158DRAFT_1604 0.31 -0.4 1,664,627 + B158DRAFT_1604 0.31 -0.2 1,664,635 - B158DRAFT_1604 0.32 +0.4 1,664,661 + B158DRAFT_1604 0.34 -1.0 1,664,683 + B158DRAFT_1604 0.35 +0.2 1,664,698 + B158DRAFT_1604 0.36 -0.1 1,664,706 - B158DRAFT_1604 0.37 -0.1 1,664,727 - B158DRAFT_1604 0.38 -0.0 1,664,729 + B158DRAFT_1604 0.38 +1.0 1,664,729 + B158DRAFT_1604 0.38 +0.6 1,664,734 + B158DRAFT_1604 0.39 -0.6 1,664,742 - B158DRAFT_1604 0.39 +0.4 1,664,747 - B158DRAFT_1604 0.40 -0.7 1,664,789 + B158DRAFT_1604 0.42 -0.1 1,664,796 + B158DRAFT_1604 0.43 -0.1 1,664,806 - B158DRAFT_1604 0.44 +1.3 1,664,830 - B158DRAFT_1604 0.45 -0.2 1,664,835 + B158DRAFT_1604 0.46 -0.8 1,664,835 + B158DRAFT_1604 0.46 +0.3 1,664,835 + B158DRAFT_1604 0.46 -0.2 1,664,835 + B158DRAFT_1604 0.46 -0.3 1,664,835 + B158DRAFT_1604 0.46 -0.6 1,664,835 + B158DRAFT_1604 0.46 +0.2 1,664,835 + B158DRAFT_1604 0.46 -0.1 1,664,835 + B158DRAFT_1604 0.46 -0.4 1,664,835 + B158DRAFT_1604 0.46 +0.1 1,664,835 + B158DRAFT_1604 0.46 -0.3 1,664,835 + B158DRAFT_1604 0.46 -0.0 1,664,835 + B158DRAFT_1604 0.46 +0.1 1,664,843 - B158DRAFT_1604 0.46 -0.2 1,664,843 - B158DRAFT_1604 0.46 +1.1 1,664,843 - B158DRAFT_1604 0.46 +0.1 1,664,843 - B158DRAFT_1604 0.46 -0.5 1,664,843 - B158DRAFT_1604 0.46 -0.4 1,664,843 - B158DRAFT_1604 0.46 +0.1 1,664,843 - B158DRAFT_1604 0.46 -0.6 1,664,843 - B158DRAFT_1604 0.46 -0.7 1,664,843 - B158DRAFT_1604 0.46 -0.3 1,664,885 + B158DRAFT_1604 0.49 +0.3 1,664,903 + B158DRAFT_1604 0.50 +0.4 1,664,911 - B158DRAFT_1604 0.51 -0.1 1,664,972 + B158DRAFT_1604 0.55 -0.2 1,664,980 - B158DRAFT_1604 0.56 +0.1 1,664,995 - B158DRAFT_1604 0.57 -0.3 1,664,995 - B158DRAFT_1604 0.57 +0.2 1,665,023 + B158DRAFT_1604 0.59 +0.4 1,665,023 + B158DRAFT_1604 0.59 +0.1 1,665,037 - B158DRAFT_1604 0.60 -0.2 1,665,050 + B158DRAFT_1604 0.61 -0.8
Or see this region's nucleotide sequence