Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1405 and B158DRAFT_1406 are separated by 11 nucleotides B158DRAFT_1406 and B158DRAFT_1407 are separated by 220 nucleotides
B158DRAFT_1405: B158DRAFT_1405 - Cation/multidrug efflux pump, at 1,452,048 to 1,455,233
_1405
B158DRAFT_1406: B158DRAFT_1406 - RND family efflux transporter, MFP subunit, at 1,455,245 to 1,456,462
_1406
B158DRAFT_1407: B158DRAFT_1407 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 1,456,683 to 1,458,731
_1407
Position (kb)
1455
1456
1457 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1454.317 kb on + strand, within B158DRAFT_1405 at 1454.330 kb on - strand, within B158DRAFT_1405 at 1454.369 kb on + strand, within B158DRAFT_1405 at 1454.369 kb on + strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.377 kb on - strand, within B158DRAFT_1405 at 1454.420 kb on + strand, within B158DRAFT_1405 at 1454.428 kb on - strand, within B158DRAFT_1405 at 1454.513 kb on - strand, within B158DRAFT_1405 at 1454.514 kb on + strand, within B158DRAFT_1405 at 1454.558 kb on + strand, within B158DRAFT_1405 at 1454.577 kb on - strand, within B158DRAFT_1405 at 1454.616 kb on + strand, within B158DRAFT_1405 at 1454.648 kb on + strand, within B158DRAFT_1405 at 1454.681 kb on + strand, within B158DRAFT_1405 at 1454.681 kb on + strand, within B158DRAFT_1405 at 1454.689 kb on + strand, within B158DRAFT_1405 at 1454.689 kb on - strand, within B158DRAFT_1405 at 1454.696 kb on - strand, within B158DRAFT_1405 at 1454.756 kb on + strand, within B158DRAFT_1405 at 1454.764 kb on - strand, within B158DRAFT_1405 at 1454.849 kb on + strand, within B158DRAFT_1405 at 1454.907 kb on - strand, within B158DRAFT_1405 at 1455.014 kb on + strand at 1455.035 kb on + strand at 1455.073 kb on - strand at 1455.073 kb on - strand at 1455.073 kb on - strand at 1455.232 kb on - strand at 1455.264 kb on + strand at 1455.269 kb on + strand at 1455.269 kb on + strand at 1455.269 kb on + strand at 1455.269 kb on + strand at 1455.272 kb on + strand at 1455.277 kb on - strand at 1455.277 kb on - strand at 1455.306 kb on + strand at 1455.361 kb on - strand at 1455.521 kb on + strand, within B158DRAFT_1406 at 1455.717 kb on + strand, within B158DRAFT_1406 at 1455.767 kb on + strand, within B158DRAFT_1406 at 1455.791 kb on + strand, within B158DRAFT_1406 at 1455.925 kb on + strand, within B158DRAFT_1406 at 1455.935 kb on + strand, within B158DRAFT_1406 at 1455.956 kb on + strand, within B158DRAFT_1406 at 1455.956 kb on + strand, within B158DRAFT_1406 at 1455.956 kb on + strand, within B158DRAFT_1406 at 1455.956 kb on + strand, within B158DRAFT_1406 at 1455.956 kb on + strand, within B158DRAFT_1406 at 1455.964 kb on - strand, within B158DRAFT_1406 at 1455.964 kb on - strand, within B158DRAFT_1406 at 1455.964 kb on - strand, within B158DRAFT_1406 at 1455.987 kb on + strand, within B158DRAFT_1406 at 1456.034 kb on - strand, within B158DRAFT_1406 at 1456.058 kb on + strand, within B158DRAFT_1406 at 1456.058 kb on + strand, within B158DRAFT_1406 at 1456.068 kb on - strand, within B158DRAFT_1406 at 1456.077 kb on + strand, within B158DRAFT_1406 at 1456.077 kb on + strand, within B158DRAFT_1406 at 1456.077 kb on + strand, within B158DRAFT_1406 at 1456.077 kb on + strand, within B158DRAFT_1406 at 1456.085 kb on - strand, within B158DRAFT_1406 at 1456.085 kb on - strand, within B158DRAFT_1406 at 1456.098 kb on - strand, within B158DRAFT_1406 at 1456.100 kb on - strand, within B158DRAFT_1406 at 1456.162 kb on + strand, within B158DRAFT_1406 at 1456.258 kb on + strand, within B158DRAFT_1406 at 1456.258 kb on + strand, within B158DRAFT_1406 at 1456.265 kb on + strand, within B158DRAFT_1406 at 1456.266 kb on - strand, within B158DRAFT_1406 at 1456.266 kb on - strand, within B158DRAFT_1406 at 1456.266 kb on - strand, within B158DRAFT_1406 at 1456.266 kb on - strand, within B158DRAFT_1406 at 1456.273 kb on - strand, within B158DRAFT_1406 at 1456.280 kb on + strand, within B158DRAFT_1406 at 1456.285 kb on + strand, within B158DRAFT_1406 at 1456.304 kb on + strand, within B158DRAFT_1406 at 1456.314 kb on + strand, within B158DRAFT_1406 at 1456.386 kb on - strand at 1456.386 kb on - strand at 1456.520 kb on - strand at 1456.544 kb on - strand at 1456.544 kb on - strand at 1456.592 kb on - strand at 1456.809 kb on + strand at 1456.828 kb on - strand at 1456.855 kb on + strand at 1456.860 kb on - strand at 1456.863 kb on - strand at 1456.863 kb on - strand at 1456.877 kb on - strand at 1456.926 kb on - strand, within B158DRAFT_1407 at 1456.954 kb on - strand, within B158DRAFT_1407 at 1456.981 kb on + strand, within B158DRAFT_1407 at 1456.983 kb on + strand, within B158DRAFT_1407 at 1456.991 kb on + strand, within B158DRAFT_1407 at 1456.999 kb on + strand, within B158DRAFT_1407 at 1457.070 kb on - strand, within B158DRAFT_1407 at 1457.070 kb on - strand, within B158DRAFT_1407 at 1457.070 kb on - strand, within B158DRAFT_1407 at 1457.085 kb on + strand, within B158DRAFT_1407 at 1457.121 kb on + strand, within B158DRAFT_1407 at 1457.121 kb on + strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.129 kb on - strand, within B158DRAFT_1407 at 1457.157 kb on + strand, within B158DRAFT_1407 at 1457.171 kb on - strand, within B158DRAFT_1407 at 1457.212 kb on - strand, within B158DRAFT_1407 at 1457.240 kb on + strand, within B158DRAFT_1407 at 1457.243 kb on + strand, within B158DRAFT_1407 at 1457.243 kb on + strand, within B158DRAFT_1407 at 1457.243 kb on + strand, within B158DRAFT_1407 at 1457.280 kb on + strand, within B158DRAFT_1407 at 1457.280 kb on + strand, within B158DRAFT_1407 at 1457.290 kb on + strand, within B158DRAFT_1407 at 1457.293 kb on - strand, within B158DRAFT_1407 at 1457.295 kb on + strand, within B158DRAFT_1407 at 1457.298 kb on - strand, within B158DRAFT_1407 at 1457.337 kb on + strand, within B158DRAFT_1407 at 1457.409 kb on - strand, within B158DRAFT_1407 at 1457.409 kb on - strand, within B158DRAFT_1407 at 1457.456 kb on + strand, within B158DRAFT_1407 at 1457.456 kb on + strand, within B158DRAFT_1407
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,454,317 + B158DRAFT_1405 0.71 -2.2 1,454,330 - B158DRAFT_1405 0.72 -2.8 1,454,369 + B158DRAFT_1405 0.73 -1.3 1,454,369 + B158DRAFT_1405 0.73 -3.2 1,454,377 - B158DRAFT_1405 0.73 -2.0 1,454,377 - B158DRAFT_1405 0.73 -2.8 1,454,377 - B158DRAFT_1405 0.73 -0.0 1,454,377 - B158DRAFT_1405 0.73 -2.2 1,454,377 - B158DRAFT_1405 0.73 -1.4 1,454,377 - B158DRAFT_1405 0.73 -1.2 1,454,377 - B158DRAFT_1405 0.73 -1.7 1,454,377 - B158DRAFT_1405 0.73 -4.1 1,454,420 + B158DRAFT_1405 0.74 -2.5 1,454,428 - B158DRAFT_1405 0.75 -2.3 1,454,513 - B158DRAFT_1405 0.77 -2.8 1,454,514 + B158DRAFT_1405 0.77 -2.5 1,454,558 + B158DRAFT_1405 0.79 -1.9 1,454,577 - B158DRAFT_1405 0.79 -1.7 1,454,616 + B158DRAFT_1405 0.81 -1.9 1,454,648 + B158DRAFT_1405 0.82 -2.2 1,454,681 + B158DRAFT_1405 0.83 -1.8 1,454,681 + B158DRAFT_1405 0.83 -2.0 1,454,689 + B158DRAFT_1405 0.83 -1.3 1,454,689 - B158DRAFT_1405 0.83 -2.2 1,454,696 - B158DRAFT_1405 0.83 -1.6 1,454,756 + B158DRAFT_1405 0.85 -1.3 1,454,764 - B158DRAFT_1405 0.85 -2.1 1,454,849 + B158DRAFT_1405 0.88 -2.1 1,454,907 - B158DRAFT_1405 0.90 -1.8 1,455,014 + -1.2 1,455,035 + -1.3 1,455,073 - -2.3 1,455,073 - -1.9 1,455,073 - -2.2 1,455,232 - -2.6 1,455,264 + -2.2 1,455,269 + -3.6 1,455,269 + -3.2 1,455,269 + -2.6 1,455,269 + -1.4 1,455,272 + -1.1 1,455,277 - -1.6 1,455,277 - -1.7 1,455,306 + -2.3 1,455,361 - -2.3 1,455,521 + B158DRAFT_1406 0.23 -2.5 1,455,717 + B158DRAFT_1406 0.39 -1.9 1,455,767 + B158DRAFT_1406 0.43 -3.3 1,455,791 + B158DRAFT_1406 0.45 -1.6 1,455,925 + B158DRAFT_1406 0.56 -1.3 1,455,935 + B158DRAFT_1406 0.57 -2.9 1,455,956 + B158DRAFT_1406 0.58 -1.5 1,455,956 + B158DRAFT_1406 0.58 -2.0 1,455,956 + B158DRAFT_1406 0.58 -2.7 1,455,956 + B158DRAFT_1406 0.58 -1.8 1,455,956 + B158DRAFT_1406 0.58 -4.2 1,455,964 - B158DRAFT_1406 0.59 -1.5 1,455,964 - B158DRAFT_1406 0.59 -2.4 1,455,964 - B158DRAFT_1406 0.59 -1.4 1,455,987 + B158DRAFT_1406 0.61 -2.2 1,456,034 - B158DRAFT_1406 0.65 -2.3 1,456,058 + B158DRAFT_1406 0.67 -2.9 1,456,058 + B158DRAFT_1406 0.67 -1.8 1,456,068 - B158DRAFT_1406 0.68 -1.2 1,456,077 + B158DRAFT_1406 0.68 -1.6 1,456,077 + B158DRAFT_1406 0.68 -2.7 1,456,077 + B158DRAFT_1406 0.68 -3.6 1,456,077 + B158DRAFT_1406 0.68 -2.9 1,456,085 - B158DRAFT_1406 0.69 -3.1 1,456,085 - B158DRAFT_1406 0.69 -2.3 1,456,098 - B158DRAFT_1406 0.70 -1.7 1,456,100 - B158DRAFT_1406 0.70 -2.8 1,456,162 + B158DRAFT_1406 0.75 -2.3 1,456,258 + B158DRAFT_1406 0.83 -2.4 1,456,258 + B158DRAFT_1406 0.83 -1.8 1,456,265 + B158DRAFT_1406 0.84 -2.2 1,456,266 - B158DRAFT_1406 0.84 -1.5 1,456,266 - B158DRAFT_1406 0.84 -3.8 1,456,266 - B158DRAFT_1406 0.84 -3.3 1,456,266 - B158DRAFT_1406 0.84 -2.1 1,456,273 - B158DRAFT_1406 0.84 -0.4 1,456,280 + B158DRAFT_1406 0.85 -1.5 1,456,285 + B158DRAFT_1406 0.85 -2.8 1,456,304 + B158DRAFT_1406 0.87 -3.2 1,456,314 + B158DRAFT_1406 0.88 -2.3 1,456,386 - -2.1 1,456,386 - -4.0 1,456,520 - -1.8 1,456,544 - -0.5 1,456,544 - -1.5 1,456,592 - -0.3 1,456,809 + -0.2 1,456,828 - -0.3 1,456,855 + +0.2 1,456,860 - -1.1 1,456,863 - -0.4 1,456,863 - -0.8 1,456,877 - -0.4 1,456,926 - B158DRAFT_1407 0.12 -0.1 1,456,954 - B158DRAFT_1407 0.13 +0.4 1,456,981 + B158DRAFT_1407 0.15 -0.5 1,456,983 + B158DRAFT_1407 0.15 +0.1 1,456,991 + B158DRAFT_1407 0.15 +0.0 1,456,999 + B158DRAFT_1407 0.15 -0.1 1,457,070 - B158DRAFT_1407 0.19 -0.7 1,457,070 - B158DRAFT_1407 0.19 -0.4 1,457,070 - B158DRAFT_1407 0.19 +0.4 1,457,085 + B158DRAFT_1407 0.20 -0.5 1,457,121 + B158DRAFT_1407 0.21 -0.1 1,457,121 + B158DRAFT_1407 0.21 -0.4 1,457,129 - B158DRAFT_1407 0.22 +0.1 1,457,129 - B158DRAFT_1407 0.22 +0.6 1,457,129 - B158DRAFT_1407 0.22 +0.4 1,457,129 - B158DRAFT_1407 0.22 -0.1 1,457,129 - B158DRAFT_1407 0.22 -0.0 1,457,129 - B158DRAFT_1407 0.22 +0.4 1,457,157 + B158DRAFT_1407 0.23 -1.4 1,457,171 - B158DRAFT_1407 0.24 -0.3 1,457,212 - B158DRAFT_1407 0.26 -0.0 1,457,240 + B158DRAFT_1407 0.27 +0.3 1,457,243 + B158DRAFT_1407 0.27 -0.3 1,457,243 + B158DRAFT_1407 0.27 -0.1 1,457,243 + B158DRAFT_1407 0.27 -0.5 1,457,280 + B158DRAFT_1407 0.29 -1.3 1,457,280 + B158DRAFT_1407 0.29 -0.9 1,457,290 + B158DRAFT_1407 0.30 +0.5 1,457,293 - B158DRAFT_1407 0.30 -0.6 1,457,295 + B158DRAFT_1407 0.30 -0.5 1,457,298 - B158DRAFT_1407 0.30 -0.8 1,457,337 + B158DRAFT_1407 0.32 -0.0 1,457,409 - B158DRAFT_1407 0.35 -0.4 1,457,409 - B158DRAFT_1407 0.35 -0.4 1,457,456 + B158DRAFT_1407 0.38 -0.4 1,457,456 + B158DRAFT_1407 0.38 -0.4
Or see this region's nucleotide sequence