Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2252

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2251 and B158DRAFT_2252 are separated by 43 nucleotidesB158DRAFT_2252 and B158DRAFT_2253 overlap by 1 nucleotidesB158DRAFT_2253 and B158DRAFT_2254 are separated by 129 nucleotides B158DRAFT_2251: B158DRAFT_2251 - glutamate-cysteine ligase (EC 6.3.2.2), at 412,976 to 414,544 _2251 B158DRAFT_2252: B158DRAFT_2252 - sodium/proline symporter, at 414,588 to 416,177 _2252 B158DRAFT_2253: B158DRAFT_2253 - Acetyltransferases, at 416,177 to 416,659 _2253 B158DRAFT_2254: B158DRAFT_2254 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 416,789 to 417,970 _2254 Position (kb) 414 415 416 417Strain fitness (log2 ratio) -2 -1 0 1at 413.623 kb on + strand, within B158DRAFT_2251at 414.585 kb on + strandat 414.585 kb on + strandat 414.585 kb on + strandat 414.585 kb on + strandat 414.593 kb on - strandat 414.593 kb on - strandat 414.622 kb on + strandat 414.622 kb on + strandat 414.622 kb on + strandat 414.660 kb on - strandat 414.715 kb on + strandat 414.738 kb on - strandat 414.847 kb on - strand, within B158DRAFT_2252at 414.868 kb on - strand, within B158DRAFT_2252at 414.992 kb on - strand, within B158DRAFT_2252at 415.002 kb on + strand, within B158DRAFT_2252at 415.039 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.089 kb on + strand, within B158DRAFT_2252at 415.097 kb on - strand, within B158DRAFT_2252at 415.097 kb on - strand, within B158DRAFT_2252at 415.097 kb on - strand, within B158DRAFT_2252at 415.097 kb on - strand, within B158DRAFT_2252at 415.099 kb on - strand, within B158DRAFT_2252at 415.099 kb on - strand, within B158DRAFT_2252at 415.216 kb on + strand, within B158DRAFT_2252at 415.237 kb on + strand, within B158DRAFT_2252at 415.297 kb on + strand, within B158DRAFT_2252at 415.298 kb on - strand, within B158DRAFT_2252at 415.305 kb on - strand, within B158DRAFT_2252at 415.338 kb on - strand, within B158DRAFT_2252at 415.362 kb on + strand, within B158DRAFT_2252at 415.370 kb on - strand, within B158DRAFT_2252at 415.376 kb on - strand, within B158DRAFT_2252at 415.376 kb on - strand, within B158DRAFT_2252at 415.381 kb on - strand, within B158DRAFT_2252at 415.414 kb on - strand, within B158DRAFT_2252at 415.414 kb on - strand, within B158DRAFT_2252at 415.455 kb on + strand, within B158DRAFT_2252at 415.455 kb on + strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.463 kb on - strand, within B158DRAFT_2252at 415.481 kb on + strand, within B158DRAFT_2252at 415.487 kb on - strand, within B158DRAFT_2252at 415.540 kb on - strand, within B158DRAFT_2252at 415.580 kb on + strand, within B158DRAFT_2252at 415.632 kb on - strand, within B158DRAFT_2252at 415.701 kb on - strand, within B158DRAFT_2252at 415.716 kb on + strand, within B158DRAFT_2252at 415.716 kb on + strand, within B158DRAFT_2252at 415.724 kb on - strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.749 kb on + strand, within B158DRAFT_2252at 415.757 kb on - strand, within B158DRAFT_2252at 415.868 kb on - strand, within B158DRAFT_2252at 415.875 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.888 kb on - strand, within B158DRAFT_2252at 415.907 kb on - strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 416.000 kb on - strand, within B158DRAFT_2252at 416.005 kb on - strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.021 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.295 kb on + strand, within B158DRAFT_2253at 416.300 kb on + strand, within B158DRAFT_2253at 416.378 kb on - strand, within B158DRAFT_2253at 416.491 kb on - strand, within B158DRAFT_2253at 416.516 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.545 kb on + strand, within B158DRAFT_2253at 416.586 kb on + strand, within B158DRAFT_2253at 416.594 kb on - strand, within B158DRAFT_2253at 416.653 kb on + strandat 416.719 kb on + strandat 416.740 kb on + strandat 416.847 kb on - strandat 416.862 kb on + strandat 416.862 kb on + strandat 416.877 kb on + strandat 416.884 kb on - strandat 416.892 kb on + strandat 416.894 kb on - strandat 417.087 kb on + strand, within B158DRAFT_2254at 417.134 kb on + strand, within B158DRAFT_2254at 417.158 kb on + strand, within B158DRAFT_2254

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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413,623 + B158DRAFT_2251 0.41 -1.3
414,585 + +0.4
414,585 + +0.3
414,585 + -0.0
414,585 + +0.0
414,593 - +0.3
414,593 - -0.2
414,622 + -0.6
414,622 + +1.0
414,622 + +0.3
414,660 - -0.4
414,715 + -0.3
414,738 - +0.3
414,847 - B158DRAFT_2252 0.16 +0.2
414,868 - B158DRAFT_2252 0.18 +0.4
414,992 - B158DRAFT_2252 0.25 -0.5
415,002 + B158DRAFT_2252 0.26 +0.3
415,039 + B158DRAFT_2252 0.28 -0.3
415,089 + B158DRAFT_2252 0.32 +0.4
415,089 + B158DRAFT_2252 0.32 +1.3
415,089 + B158DRAFT_2252 0.32 -0.0
415,089 + B158DRAFT_2252 0.32 +0.0
415,089 + B158DRAFT_2252 0.32 +0.2
415,089 + B158DRAFT_2252 0.32 +0.0
415,097 - B158DRAFT_2252 0.32 -0.1
415,097 - B158DRAFT_2252 0.32 -0.3
415,097 - B158DRAFT_2252 0.32 -0.1
415,097 - B158DRAFT_2252 0.32 +1.4
415,099 - B158DRAFT_2252 0.32 -0.2
415,099 - B158DRAFT_2252 0.32 -0.3
415,216 + B158DRAFT_2252 0.39 +0.2
415,237 + B158DRAFT_2252 0.41 +0.1
415,297 + B158DRAFT_2252 0.45 -0.6
415,298 - B158DRAFT_2252 0.45 -0.3
415,305 - B158DRAFT_2252 0.45 +0.4
415,338 - B158DRAFT_2252 0.47 -0.3
415,362 + B158DRAFT_2252 0.49 -0.4
415,370 - B158DRAFT_2252 0.49 +0.1
415,376 - B158DRAFT_2252 0.50 -0.0
415,376 - B158DRAFT_2252 0.50 -0.1
415,381 - B158DRAFT_2252 0.50 -0.1
415,414 - B158DRAFT_2252 0.52 -0.3
415,414 - B158DRAFT_2252 0.52 -0.2
415,455 + B158DRAFT_2252 0.55 +0.1
415,455 + B158DRAFT_2252 0.55 +0.3
415,463 - B158DRAFT_2252 0.55 +0.5
415,463 - B158DRAFT_2252 0.55 +0.0
415,463 - B158DRAFT_2252 0.55 -0.3
415,481 + B158DRAFT_2252 0.56 +0.1
415,487 - B158DRAFT_2252 0.57 +0.1
415,540 - B158DRAFT_2252 0.60 -0.1
415,580 + B158DRAFT_2252 0.62 -0.3
415,632 - B158DRAFT_2252 0.66 -0.3
415,701 - B158DRAFT_2252 0.70 -0.1
415,716 + B158DRAFT_2252 0.71 +0.1
415,716 + B158DRAFT_2252 0.71 -0.1
415,724 - B158DRAFT_2252 0.71 +0.0
415,749 + B158DRAFT_2252 0.73 -0.1
415,749 + B158DRAFT_2252 0.73 +0.5
415,749 + B158DRAFT_2252 0.73 +0.1
415,757 - B158DRAFT_2252 0.74 +0.2
415,868 - B158DRAFT_2252 0.81 -0.4
415,875 + B158DRAFT_2252 0.81 +0.2
415,880 + B158DRAFT_2252 0.81 -0.4
415,880 + B158DRAFT_2252 0.81 +1.5
415,888 - B158DRAFT_2252 0.82 -0.1
415,907 - B158DRAFT_2252 0.83 -0.0
415,940 + B158DRAFT_2252 0.85 -0.0
415,940 + B158DRAFT_2252 0.85 -0.3
416,000 - B158DRAFT_2252 0.89 -1.9
416,005 - B158DRAFT_2252 0.89 -0.5
416,008 + B158DRAFT_2252 0.89 +0.1
416,008 + B158DRAFT_2252 0.89 -0.3
416,008 + B158DRAFT_2252 0.89 +0.3
416,016 - B158DRAFT_2252 0.90 -0.0
416,016 - B158DRAFT_2252 0.90 -0.6
416,021 - -0.2
416,070 - -0.3
416,070 - -0.9
416,070 - +0.1
416,070 - +0.1
416,070 - -0.1
416,070 - -0.6
416,295 + B158DRAFT_2253 0.24 +0.1
416,300 + B158DRAFT_2253 0.25 +0.6
416,378 - B158DRAFT_2253 0.42 -0.2
416,491 - B158DRAFT_2253 0.65 +1.1
416,516 + B158DRAFT_2253 0.70 +0.2
416,540 + B158DRAFT_2253 0.75 -0.4
416,540 + B158DRAFT_2253 0.75 -0.5
416,540 + B158DRAFT_2253 0.75 +0.3
416,545 + B158DRAFT_2253 0.76 +0.3
416,586 + B158DRAFT_2253 0.85 +0.4
416,594 - B158DRAFT_2253 0.86 -0.1
416,653 + -0.0
416,719 + -0.9
416,740 + -0.0
416,847 - +0.3
416,862 + -1.3
416,862 + +0.2
416,877 + +0.3
416,884 - -0.9
416,892 + +0.4
416,894 - +0.5
417,087 + B158DRAFT_2254 0.25 -0.1
417,134 + B158DRAFT_2254 0.29 -0.2
417,158 + B158DRAFT_2254 0.31 -0.0

Or see this region's nucleotide sequence