Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1783

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1782 and B158DRAFT_1783 are separated by 47 nucleotidesB158DRAFT_1783 and B158DRAFT_1784 overlap by 23 nucleotidesB158DRAFT_1784 and B158DRAFT_1785 are separated by 37 nucleotidesB158DRAFT_1785 and B158DRAFT_1786 are separated by 19 nucleotides B158DRAFT_1782: B158DRAFT_1782 - amidohydrolase, at 1,876,605 to 1,877,906 _1782 B158DRAFT_1783: B158DRAFT_1783 - Choline/ethanolamine kinase., at 1,877,954 to 1,878,790 _1783 B158DRAFT_1784: B158DRAFT_1784 - nicotinamide mononucleotide transporter PnuC, at 1,878,768 to 1,879,379 _1784 B158DRAFT_1785: B158DRAFT_1785 - Domain of unknown function DUF77., at 1,879,417 to 1,879,668 _1785 B158DRAFT_1786: B158DRAFT_1786 - Outer membrane receptor proteins, mostly Fe transport, at 1,879,688 to 1,881,883 _1786 Position (kb) 1877 1878 1879Strain fitness (log2 ratio) -1 0 1 2at 1876.993 kb on + strand, within B158DRAFT_1782at 1877.009 kb on - strand, within B158DRAFT_1782at 1877.105 kb on - strand, within B158DRAFT_1782at 1877.115 kb on - strand, within B158DRAFT_1782at 1877.139 kb on - strand, within B158DRAFT_1782at 1877.167 kb on + strand, within B158DRAFT_1782at 1877.175 kb on - strand, within B158DRAFT_1782at 1877.206 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.220 kb on + strand, within B158DRAFT_1782at 1877.245 kb on + strand, within B158DRAFT_1782at 1877.245 kb on - strand, within B158DRAFT_1782at 1877.252 kb on + strand, within B158DRAFT_1782at 1877.257 kb on + strand, within B158DRAFT_1782at 1877.292 kb on + strand, within B158DRAFT_1782at 1877.300 kb on - strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.308 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.331 kb on + strand, within B158DRAFT_1782at 1877.339 kb on - strand, within B158DRAFT_1782at 1877.404 kb on + strand, within B158DRAFT_1782at 1877.411 kb on + strand, within B158DRAFT_1782at 1877.411 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.588 kb on + strand, within B158DRAFT_1782at 1877.645 kb on - strand, within B158DRAFT_1782at 1877.853 kb on + strandat 1877.978 kb on - strandat 1877.982 kb on + strandat 1878.056 kb on - strand, within B158DRAFT_1783at 1878.065 kb on - strand, within B158DRAFT_1783at 1878.234 kb on - strand, within B158DRAFT_1783at 1878.286 kb on - strand, within B158DRAFT_1783at 1878.389 kb on - strand, within B158DRAFT_1783at 1878.395 kb on + strand, within B158DRAFT_1783at 1878.454 kb on - strand, within B158DRAFT_1783at 1878.530 kb on + strand, within B158DRAFT_1783at 1878.551 kb on + strand, within B158DRAFT_1783at 1878.551 kb on + strand, within B158DRAFT_1783at 1878.559 kb on - strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.584 kb on - strand, within B158DRAFT_1783at 1878.606 kb on - strand, within B158DRAFT_1783at 1878.608 kb on + strand, within B158DRAFT_1783at 1878.645 kb on + strand, within B158DRAFT_1783at 1878.645 kb on + strand, within B158DRAFT_1783at 1878.655 kb on + strand, within B158DRAFT_1783at 1878.663 kb on - strand, within B158DRAFT_1783at 1878.679 kb on + strand, within B158DRAFT_1783at 1878.687 kb on - strand, within B158DRAFT_1783at 1878.775 kb on + strandat 1878.775 kb on + strandat 1878.783 kb on - strandat 1878.787 kb on + strandat 1878.790 kb on - strandat 1878.795 kb on - strandat 1878.795 kb on - strandat 1878.803 kb on + strandat 1878.822 kb on + strandat 1878.830 kb on - strand, within B158DRAFT_1784at 1878.830 kb on - strand, within B158DRAFT_1784at 1878.944 kb on - strand, within B158DRAFT_1784at 1878.955 kb on + strand, within B158DRAFT_1784at 1878.955 kb on + strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.963 kb on - strand, within B158DRAFT_1784at 1878.965 kb on + strand, within B158DRAFT_1784at 1878.973 kb on - strand, within B158DRAFT_1784at 1879.069 kb on - strand, within B158DRAFT_1784at 1879.107 kb on - strand, within B158DRAFT_1784at 1879.157 kb on - strand, within B158DRAFT_1784at 1879.185 kb on - strand, within B158DRAFT_1784at 1879.215 kb on + strand, within B158DRAFT_1784at 1879.223 kb on - strand, within B158DRAFT_1784at 1879.223 kb on - strand, within B158DRAFT_1784at 1879.223 kb on - strand, within B158DRAFT_1784at 1879.256 kb on + strand, within B158DRAFT_1784at 1879.302 kb on + strand, within B158DRAFT_1784at 1879.310 kb on - strand, within B158DRAFT_1784at 1879.331 kb on - strandat 1879.360 kb on - strandat 1879.486 kb on + strand, within B158DRAFT_1785at 1879.494 kb on - strand, within B158DRAFT_1785at 1879.494 kb on - strand, within B158DRAFT_1785at 1879.520 kb on + strand, within B158DRAFT_1785at 1879.566 kb on - strand, within B158DRAFT_1785at 1879.652 kb on - strandat 1879.652 kb on - strandat 1879.663 kb on - strandat 1879.694 kb on + strandat 1879.694 kb on + strandat 1879.736 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,876,993 + B158DRAFT_1782 0.30 -0.6
1,877,009 - B158DRAFT_1782 0.31 +0.9
1,877,105 - B158DRAFT_1782 0.38 +0.2
1,877,115 - B158DRAFT_1782 0.39 +0.0
1,877,139 - B158DRAFT_1782 0.41 -0.3
1,877,167 + B158DRAFT_1782 0.43 -0.3
1,877,175 - B158DRAFT_1782 0.44 -0.3
1,877,206 - B158DRAFT_1782 0.46 -0.1
1,877,217 - B158DRAFT_1782 0.47 +0.1
1,877,217 - B158DRAFT_1782 0.47 -0.3
1,877,217 - B158DRAFT_1782 0.47 -0.8
1,877,217 - B158DRAFT_1782 0.47 -0.6
1,877,220 + B158DRAFT_1782 0.47 +0.6
1,877,245 + B158DRAFT_1782 0.49 +0.4
1,877,245 - B158DRAFT_1782 0.49 -0.2
1,877,252 + B158DRAFT_1782 0.50 +0.6
1,877,257 + B158DRAFT_1782 0.50 +0.9
1,877,292 + B158DRAFT_1782 0.53 -0.7
1,877,300 - B158DRAFT_1782 0.53 -0.6
1,877,302 + B158DRAFT_1782 0.54 -0.5
1,877,302 + B158DRAFT_1782 0.54 -1.2
1,877,302 + B158DRAFT_1782 0.54 -0.1
1,877,302 + B158DRAFT_1782 0.54 -0.4
1,877,302 + B158DRAFT_1782 0.54 +0.1
1,877,302 + B158DRAFT_1782 0.54 -0.4
1,877,308 - B158DRAFT_1782 0.54 -0.6
1,877,310 - B158DRAFT_1782 0.54 -0.6
1,877,310 - B158DRAFT_1782 0.54 -0.2
1,877,310 - B158DRAFT_1782 0.54 -0.2
1,877,331 + B158DRAFT_1782 0.56 -0.3
1,877,339 - B158DRAFT_1782 0.56 -0.1
1,877,404 + B158DRAFT_1782 0.61 +0.5
1,877,411 + B158DRAFT_1782 0.62 -0.3
1,877,411 + B158DRAFT_1782 0.62 -0.1
1,877,558 + B158DRAFT_1782 0.73 +0.2
1,877,558 + B158DRAFT_1782 0.73 -0.8
1,877,558 + B158DRAFT_1782 0.73 +1.0
1,877,588 + B158DRAFT_1782 0.75 +0.9
1,877,645 - B158DRAFT_1782 0.80 -0.6
1,877,853 + -0.1
1,877,978 - +0.0
1,877,982 + +0.1
1,878,056 - B158DRAFT_1783 0.12 -0.6
1,878,065 - B158DRAFT_1783 0.13 -0.8
1,878,234 - B158DRAFT_1783 0.33 -0.2
1,878,286 - B158DRAFT_1783 0.40 -0.5
1,878,389 - B158DRAFT_1783 0.52 +0.2
1,878,395 + B158DRAFT_1783 0.53 -0.3
1,878,454 - B158DRAFT_1783 0.60 -1.2
1,878,530 + B158DRAFT_1783 0.69 +0.4
1,878,551 + B158DRAFT_1783 0.71 -0.3
1,878,551 + B158DRAFT_1783 0.71 -0.2
1,878,559 - B158DRAFT_1783 0.72 -0.9
1,878,576 + B158DRAFT_1783 0.74 -1.5
1,878,576 + B158DRAFT_1783 0.74 -0.3
1,878,576 + B158DRAFT_1783 0.74 -0.8
1,878,576 + B158DRAFT_1783 0.74 -0.3
1,878,584 - B158DRAFT_1783 0.75 -0.7
1,878,606 - B158DRAFT_1783 0.78 -0.3
1,878,608 + B158DRAFT_1783 0.78 -0.3
1,878,645 + B158DRAFT_1783 0.83 -0.0
1,878,645 + B158DRAFT_1783 0.83 +0.5
1,878,655 + B158DRAFT_1783 0.84 -0.6
1,878,663 - B158DRAFT_1783 0.85 -0.1
1,878,679 + B158DRAFT_1783 0.87 -0.2
1,878,687 - B158DRAFT_1783 0.88 +0.0
1,878,775 + -0.9
1,878,775 + -0.9
1,878,783 - -0.8
1,878,787 + -0.2
1,878,790 - -0.8
1,878,795 - -0.4
1,878,795 - -0.2
1,878,803 + -0.4
1,878,822 + -1.0
1,878,830 - B158DRAFT_1784 0.10 -0.2
1,878,830 - B158DRAFT_1784 0.10 -0.9
1,878,944 - B158DRAFT_1784 0.29 -0.1
1,878,955 + B158DRAFT_1784 0.31 -0.2
1,878,955 + B158DRAFT_1784 0.31 -0.6
1,878,963 - B158DRAFT_1784 0.32 -0.8
1,878,963 - B158DRAFT_1784 0.32 -0.8
1,878,963 - B158DRAFT_1784 0.32 -0.9
1,878,963 - B158DRAFT_1784 0.32 -0.3
1,878,963 - B158DRAFT_1784 0.32 +1.3
1,878,963 - B158DRAFT_1784 0.32 -1.4
1,878,963 - B158DRAFT_1784 0.32 -0.7
1,878,963 - B158DRAFT_1784 0.32 -0.6
1,878,965 + B158DRAFT_1784 0.32 -0.3
1,878,973 - B158DRAFT_1784 0.33 -0.9
1,879,069 - B158DRAFT_1784 0.49 +0.0
1,879,107 - B158DRAFT_1784 0.55 +0.3
1,879,157 - B158DRAFT_1784 0.64 +0.1
1,879,185 - B158DRAFT_1784 0.68 +2.1
1,879,215 + B158DRAFT_1784 0.73 -0.8
1,879,223 - B158DRAFT_1784 0.74 +0.2
1,879,223 - B158DRAFT_1784 0.74 -0.6
1,879,223 - B158DRAFT_1784 0.74 -0.2
1,879,256 + B158DRAFT_1784 0.80 -0.7
1,879,302 + B158DRAFT_1784 0.87 -0.6
1,879,310 - B158DRAFT_1784 0.89 -0.7
1,879,331 - -0.8
1,879,360 - -0.1
1,879,486 + B158DRAFT_1785 0.27 -0.5
1,879,494 - B158DRAFT_1785 0.31 +0.1
1,879,494 - B158DRAFT_1785 0.31 -0.2
1,879,520 + B158DRAFT_1785 0.41 -0.9
1,879,566 - B158DRAFT_1785 0.59 -0.2
1,879,652 - -0.9
1,879,652 - +0.1
1,879,663 - -0.2
1,879,694 + -0.5
1,879,694 + -0.6
1,879,736 - +0.1

Or see this region's nucleotide sequence