Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1513

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1511 and B158DRAFT_1512 are separated by 6 nucleotidesB158DRAFT_1512 and B158DRAFT_1513 are separated by 7 nucleotidesB158DRAFT_1513 and B158DRAFT_1514 are separated by 165 nucleotidesB158DRAFT_1514 and B158DRAFT_1515 overlap by 1 nucleotides B158DRAFT_1511: B158DRAFT_1511 - Predicted esterase, at 1,566,121 to 1,566,690 _1511 B158DRAFT_1512: B158DRAFT_1512 - Protein of unknown function (DUF2489)., at 1,566,697 to 1,567,170 _1512 B158DRAFT_1513: B158DRAFT_1513 - tRNA_Arg_CCG, at 1,567,178 to 1,567,254 _1513 B158DRAFT_1514: B158DRAFT_1514 - Pseudouridylate synthases, 23S RNA-specific, at 1,567,420 to 1,568,088 _1514 B158DRAFT_1515: B158DRAFT_1515 - methyltransferase, putative, at 1,568,088 to 1,569,089 _1515 Position (kb) 1567 1568Strain fitness (log2 ratio) -2 -1 0 1 2at 1566.211 kb on + strand, within B158DRAFT_1511at 1566.211 kb on + strand, within B158DRAFT_1511at 1566.219 kb on - strand, within B158DRAFT_1511at 1566.224 kb on + strand, within B158DRAFT_1511at 1566.225 kb on - strand, within B158DRAFT_1511at 1566.233 kb on - strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.247 kb on - strand, within B158DRAFT_1511at 1566.247 kb on - strand, within B158DRAFT_1511at 1566.341 kb on - strand, within B158DRAFT_1511at 1566.353 kb on + strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.401 kb on - strand, within B158DRAFT_1511at 1566.463 kb on - strand, within B158DRAFT_1511at 1566.475 kb on + strand, within B158DRAFT_1511at 1566.478 kb on + strand, within B158DRAFT_1511at 1566.478 kb on - strand, within B158DRAFT_1511at 1566.530 kb on + strand, within B158DRAFT_1511at 1566.538 kb on - strand, within B158DRAFT_1511at 1566.543 kb on - strand, within B158DRAFT_1511at 1566.548 kb on + strand, within B158DRAFT_1511at 1566.593 kb on + strand, within B158DRAFT_1511at 1566.594 kb on + strand, within B158DRAFT_1511at 1566.602 kb on - strand, within B158DRAFT_1511at 1566.602 kb on - strand, within B158DRAFT_1511at 1566.622 kb on + strand, within B158DRAFT_1511at 1566.632 kb on + strand, within B158DRAFT_1511at 1566.640 kb on - strandat 1566.640 kb on - strandat 1566.762 kb on - strand, within B158DRAFT_1512at 1566.825 kb on - strand, within B158DRAFT_1512at 1566.884 kb on + strand, within B158DRAFT_1512at 1566.892 kb on - strand, within B158DRAFT_1512at 1566.894 kb on + strand, within B158DRAFT_1512at 1566.902 kb on - strand, within B158DRAFT_1512at 1566.904 kb on + strand, within B158DRAFT_1512at 1566.942 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.999 kb on - strand, within B158DRAFT_1512at 1567.091 kb on - strand, within B158DRAFT_1512at 1567.114 kb on - strand, within B158DRAFT_1512at 1567.140 kb on + strandat 1567.148 kb on + strandat 1567.293 kb on - strandat 1567.305 kb on + strandat 1567.313 kb on - strandat 1567.358 kb on - strandat 1567.358 kb on - strandat 1567.372 kb on + strandat 1567.452 kb on - strandat 1567.475 kb on - strandat 1567.477 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.490 kb on + strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.569 kb on + strand, within B158DRAFT_1514at 1567.572 kb on - strand, within B158DRAFT_1514at 1567.572 kb on - strand, within B158DRAFT_1514at 1567.598 kb on - strand, within B158DRAFT_1514at 1567.626 kb on + strand, within B158DRAFT_1514at 1567.723 kb on - strand, within B158DRAFT_1514at 1567.793 kb on + strand, within B158DRAFT_1514at 1567.793 kb on + strand, within B158DRAFT_1514at 1567.798 kb on + strand, within B158DRAFT_1514at 1567.798 kb on + strand, within B158DRAFT_1514at 1567.803 kb on - strand, within B158DRAFT_1514at 1567.835 kb on - strand, within B158DRAFT_1514at 1567.916 kb on + strand, within B158DRAFT_1514at 1567.916 kb on + strand, within B158DRAFT_1514at 1567.916 kb on + strand, within B158DRAFT_1514at 1567.924 kb on - strand, within B158DRAFT_1514at 1567.924 kb on - strand, within B158DRAFT_1514at 1567.990 kb on + strand, within B158DRAFT_1514at 1568.051 kb on + strandat 1568.052 kb on + strandat 1568.052 kb on + strandat 1568.070 kb on - strandat 1568.142 kb on + strandat 1568.152 kb on + strandat 1568.166 kb on + strandat 1568.174 kb on - strandat 1568.230 kb on - strand, within B158DRAFT_1515at 1568.243 kb on - strand, within B158DRAFT_1515at 1568.254 kb on - strand, within B158DRAFT_1515

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,566,211 + B158DRAFT_1511 0.16 -0.4
1,566,211 + B158DRAFT_1511 0.16 +0.1
1,566,219 - B158DRAFT_1511 0.17 -0.1
1,566,224 + B158DRAFT_1511 0.18 +0.2
1,566,225 - B158DRAFT_1511 0.18 -0.2
1,566,233 - B158DRAFT_1511 0.20 +1.9
1,566,239 + B158DRAFT_1511 0.21 -0.0
1,566,239 + B158DRAFT_1511 0.21 +0.3
1,566,239 + B158DRAFT_1511 0.21 -0.8
1,566,247 - B158DRAFT_1511 0.22 -0.2
1,566,247 - B158DRAFT_1511 0.22 -0.0
1,566,341 - B158DRAFT_1511 0.39 -0.5
1,566,353 + B158DRAFT_1511 0.41 -0.5
1,566,361 - B158DRAFT_1511 0.42 +0.5
1,566,361 - B158DRAFT_1511 0.42 -0.1
1,566,361 - B158DRAFT_1511 0.42 +0.9
1,566,361 - B158DRAFT_1511 0.42 -0.3
1,566,401 - B158DRAFT_1511 0.49 +0.8
1,566,463 - B158DRAFT_1511 0.60 +0.2
1,566,475 + B158DRAFT_1511 0.62 -0.1
1,566,478 + B158DRAFT_1511 0.63 +0.2
1,566,478 - B158DRAFT_1511 0.63 -0.3
1,566,530 + B158DRAFT_1511 0.72 -2.0
1,566,538 - B158DRAFT_1511 0.73 +1.9
1,566,543 - B158DRAFT_1511 0.74 +0.8
1,566,548 + B158DRAFT_1511 0.75 -0.4
1,566,593 + B158DRAFT_1511 0.83 -0.1
1,566,594 + B158DRAFT_1511 0.83 -1.9
1,566,602 - B158DRAFT_1511 0.84 -0.3
1,566,602 - B158DRAFT_1511 0.84 -0.3
1,566,622 + B158DRAFT_1511 0.88 +0.5
1,566,632 + B158DRAFT_1511 0.90 -0.1
1,566,640 - +0.3
1,566,640 - -0.2
1,566,762 - B158DRAFT_1512 0.14 -0.3
1,566,825 - B158DRAFT_1512 0.27 +0.3
1,566,884 + B158DRAFT_1512 0.39 -0.1
1,566,892 - B158DRAFT_1512 0.41 +0.8
1,566,894 + B158DRAFT_1512 0.42 -1.0
1,566,902 - B158DRAFT_1512 0.43 -0.0
1,566,904 + B158DRAFT_1512 0.44 -0.2
1,566,942 + B158DRAFT_1512 0.52 +0.4
1,566,981 + B158DRAFT_1512 0.60 -0.0
1,566,981 + B158DRAFT_1512 0.60 +0.7
1,566,981 + B158DRAFT_1512 0.60 +0.0
1,566,981 + B158DRAFT_1512 0.60 -0.6
1,566,981 + B158DRAFT_1512 0.60 -0.4
1,566,981 + B158DRAFT_1512 0.60 -1.2
1,566,981 + B158DRAFT_1512 0.60 -0.4
1,566,981 + B158DRAFT_1512 0.60 +0.4
1,566,981 + B158DRAFT_1512 0.60 -1.2
1,566,981 + B158DRAFT_1512 0.60 -0.2
1,566,981 + B158DRAFT_1512 0.60 -0.1
1,566,981 + B158DRAFT_1512 0.60 -0.1
1,566,981 + B158DRAFT_1512 0.60 +0.1
1,566,981 + B158DRAFT_1512 0.60 -0.4
1,566,981 + B158DRAFT_1512 0.60 +0.0
1,566,981 + B158DRAFT_1512 0.60 +0.4
1,566,981 + B158DRAFT_1512 0.60 +0.0
1,566,989 - B158DRAFT_1512 0.62 -0.2
1,566,989 - B158DRAFT_1512 0.62 -0.8
1,566,989 - B158DRAFT_1512 0.62 +0.4
1,566,989 - B158DRAFT_1512 0.62 -0.8
1,566,989 - B158DRAFT_1512 0.62 +0.2
1,566,989 - B158DRAFT_1512 0.62 -0.9
1,566,989 - B158DRAFT_1512 0.62 +0.0
1,566,989 - B158DRAFT_1512 0.62 +0.1
1,566,989 - B158DRAFT_1512 0.62 -0.7
1,566,989 - B158DRAFT_1512 0.62 -0.3
1,566,989 - B158DRAFT_1512 0.62 -0.6
1,566,999 - B158DRAFT_1512 0.64 -0.8
1,567,091 - B158DRAFT_1512 0.83 -0.1
1,567,114 - B158DRAFT_1512 0.88 -0.0
1,567,140 + -1.0
1,567,148 + -0.5
1,567,293 - -0.4
1,567,305 + +0.3
1,567,313 - -0.2
1,567,358 - -0.3
1,567,358 - -1.1
1,567,372 + +0.9
1,567,452 - -0.6
1,567,475 - -0.1
1,567,477 + +0.4
1,567,482 + -0.6
1,567,482 + -0.5
1,567,482 + -0.0
1,567,482 + -0.4
1,567,490 + B158DRAFT_1514 0.10 -0.3
1,567,490 - B158DRAFT_1514 0.10 +0.6
1,567,490 - B158DRAFT_1514 0.10 +0.4
1,567,490 - B158DRAFT_1514 0.10 -0.1
1,567,562 - B158DRAFT_1514 0.21 -0.1
1,567,562 - B158DRAFT_1514 0.21 -0.5
1,567,562 - B158DRAFT_1514 0.21 -0.1
1,567,562 - B158DRAFT_1514 0.21 -0.0
1,567,562 - B158DRAFT_1514 0.21 +0.3
1,567,569 + B158DRAFT_1514 0.22 -0.3
1,567,572 - B158DRAFT_1514 0.23 -0.3
1,567,572 - B158DRAFT_1514 0.23 -0.4
1,567,598 - B158DRAFT_1514 0.27 -0.2
1,567,626 + B158DRAFT_1514 0.31 -0.5
1,567,723 - B158DRAFT_1514 0.45 +0.1
1,567,793 + B158DRAFT_1514 0.56 -0.5
1,567,793 + B158DRAFT_1514 0.56 -2.5
1,567,798 + B158DRAFT_1514 0.57 +1.2
1,567,798 + B158DRAFT_1514 0.57 -0.0
1,567,803 - B158DRAFT_1514 0.57 +0.2
1,567,835 - B158DRAFT_1514 0.62 -0.3
1,567,916 + B158DRAFT_1514 0.74 -0.8
1,567,916 + B158DRAFT_1514 0.74 -0.9
1,567,916 + B158DRAFT_1514 0.74 +0.1
1,567,924 - B158DRAFT_1514 0.75 -0.2
1,567,924 - B158DRAFT_1514 0.75 -0.8
1,567,990 + B158DRAFT_1514 0.85 -0.2
1,568,051 + +0.0
1,568,052 + -0.3
1,568,052 + -0.1
1,568,070 - +0.2
1,568,142 + -0.5
1,568,152 + -0.2
1,568,166 + -0.3
1,568,174 - -0.8
1,568,230 - B158DRAFT_1515 0.14 -0.9
1,568,243 - B158DRAFT_1515 0.15 -0.3
1,568,254 - B158DRAFT_1515 0.17 +0.1

Or see this region's nucleotide sequence