Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0213 and B158DRAFT_0214 overlap by 4 nucleotides B158DRAFT_0214 and B158DRAFT_0215 are separated by 8 nucleotides B158DRAFT_0215 and B158DRAFT_0216 are separated by 111 nucleotides B158DRAFT_0216 and B158DRAFT_0217 are separated by 91 nucleotides B158DRAFT_0217 and B158DRAFT_0218 overlap by 4 nucleotides
B158DRAFT_0213: B158DRAFT_0213 - hypothetical protein, at 218,969 to 220,672
_0213
B158DRAFT_0214: B158DRAFT_0214 - hypothetical protein, at 220,669 to 220,944
_0214
B158DRAFT_0215: B158DRAFT_0215 - hypothetical protein, at 220,953 to 221,252
_0215
B158DRAFT_0216: B158DRAFT_0216 - hypothetical protein, at 221,364 to 222,065
_0216
B158DRAFT_0217: B158DRAFT_0217 - hypothetical protein, at 222,157 to 222,387
_0217
B158DRAFT_0218: B158DRAFT_0218 - Site-specific recombinase XerD, at 222,384 to 223,640
_0218
Position (kb) 221
222
223 Strain fitness (log2 ratio) -2
-1
0
1
2 at 220.379 kb on + strand, within B158DRAFT_0213 at 220.410 kb on + strand, within B158DRAFT_0213 at 220.418 kb on - strand, within B158DRAFT_0213 at 220.425 kb on - strand, within B158DRAFT_0213 at 220.541 kb on + strand at 220.548 kb on + strand at 220.549 kb on - strand at 220.579 kb on - strand at 220.814 kb on - strand, within B158DRAFT_0214 at 220.851 kb on - strand, within B158DRAFT_0214 at 220.851 kb on - strand, within B158DRAFT_0214 at 220.853 kb on + strand, within B158DRAFT_0214 at 220.991 kb on - strand, within B158DRAFT_0215 at 221.049 kb on - strand, within B158DRAFT_0215 at 221.049 kb on - strand, within B158DRAFT_0215 at 221.134 kb on + strand, within B158DRAFT_0215 at 221.180 kb on + strand, within B158DRAFT_0215 at 221.285 kb on - strand at 221.315 kb on + strand at 221.414 kb on - strand at 221.467 kb on - strand, within B158DRAFT_0216 at 221.561 kb on - strand, within B158DRAFT_0216 at 221.608 kb on + strand, within B158DRAFT_0216 at 221.718 kb on - strand, within B158DRAFT_0216 at 221.789 kb on - strand, within B158DRAFT_0216 at 221.822 kb on + strand, within B158DRAFT_0216 at 221.830 kb on - strand, within B158DRAFT_0216 at 221.830 kb on - strand, within B158DRAFT_0216 at 221.832 kb on - strand, within B158DRAFT_0216 at 222.136 kb on + strand at 222.144 kb on - strand at 222.144 kb on - strand at 222.144 kb on - strand at 222.144 kb on - strand at 222.144 kb on - strand at 222.173 kb on - strand at 222.177 kb on - strand at 222.186 kb on - strand, within B158DRAFT_0217 at 222.229 kb on - strand, within B158DRAFT_0217 at 222.234 kb on - strand, within B158DRAFT_0217 at 222.414 kb on + strand at 222.432 kb on + strand at 222.632 kb on + strand, within B158DRAFT_0218 at 222.719 kb on + strand, within B158DRAFT_0218 at 222.719 kb on + strand, within B158DRAFT_0218 at 222.781 kb on - strand, within B158DRAFT_0218 at 222.788 kb on - strand, within B158DRAFT_0218 at 222.819 kb on - strand, within B158DRAFT_0218 at 222.900 kb on + strand, within B158DRAFT_0218 at 222.925 kb on + strand, within B158DRAFT_0218 at 222.933 kb on - strand, within B158DRAFT_0218 at 222.996 kb on + strand, within B158DRAFT_0218 at 222.997 kb on - strand, within B158DRAFT_0218 at 222.997 kb on - strand, within B158DRAFT_0218 at 223.002 kb on - strand, within B158DRAFT_0218 at 223.004 kb on + strand, within B158DRAFT_0218 at 223.009 kb on + strand, within B158DRAFT_0218 at 223.012 kb on - strand, within B158DRAFT_0218 at 223.014 kb on + strand, within B158DRAFT_0218 at 223.021 kb on + strand, within B158DRAFT_0218
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml remove 220,379 + B158DRAFT_0213 0.83 +0.5 220,410 + B158DRAFT_0213 0.85 +0.4 220,418 - B158DRAFT_0213 0.85 +0.4 220,425 - B158DRAFT_0213 0.85 +0.4 220,541 + -0.5 220,548 + -1.0 220,549 - +1.1 220,579 - -0.5 220,814 - B158DRAFT_0214 0.53 +0.1 220,851 - B158DRAFT_0214 0.66 -0.6 220,851 - B158DRAFT_0214 0.66 -1.2 220,853 + B158DRAFT_0214 0.67 +1.2 220,991 - B158DRAFT_0215 0.13 +0.3 221,049 - B158DRAFT_0215 0.32 -1.8 221,049 - B158DRAFT_0215 0.32 +0.6 221,134 + B158DRAFT_0215 0.60 +0.3 221,180 + B158DRAFT_0215 0.76 -0.1 221,285 - -0.0 221,315 + -0.5 221,414 - +0.3 221,467 - B158DRAFT_0216 0.15 +0.6 221,561 - B158DRAFT_0216 0.28 -0.5 221,608 + B158DRAFT_0216 0.35 +0.2 221,718 - B158DRAFT_0216 0.50 +1.4 221,789 - B158DRAFT_0216 0.61 +0.0 221,822 + B158DRAFT_0216 0.65 +0.1 221,830 - B158DRAFT_0216 0.66 -0.2 221,830 - B158DRAFT_0216 0.66 +0.5 221,832 - B158DRAFT_0216 0.67 -0.1 222,136 + +0.6 222,144 - -0.4 222,144 - -0.1 222,144 - -0.3 222,144 - +0.1 222,144 - -0.5 222,173 - -0.3 222,177 - -0.0 222,186 - B158DRAFT_0217 0.13 -0.5 222,229 - B158DRAFT_0217 0.31 +0.7 222,234 - B158DRAFT_0217 0.33 +0.1 222,414 + +1.9 222,432 + +1.0 222,632 + B158DRAFT_0218 0.20 -0.3 222,719 + B158DRAFT_0218 0.27 -0.3 222,719 + B158DRAFT_0218 0.27 +0.1 222,781 - B158DRAFT_0218 0.32 -0.2 222,788 - B158DRAFT_0218 0.32 +0.1 222,819 - B158DRAFT_0218 0.35 -0.3 222,900 + B158DRAFT_0218 0.41 -0.1 222,925 + B158DRAFT_0218 0.43 -0.3 222,933 - B158DRAFT_0218 0.44 -0.0 222,996 + B158DRAFT_0218 0.49 -0.0 222,997 - B158DRAFT_0218 0.49 -0.0 222,997 - B158DRAFT_0218 0.49 +0.5 223,002 - B158DRAFT_0218 0.49 +0.2 223,004 + B158DRAFT_0218 0.49 -0.3 223,009 + B158DRAFT_0218 0.50 +0.5 223,012 - B158DRAFT_0218 0.50 -0.6 223,014 + B158DRAFT_0218 0.50 -0.9 223,021 + B158DRAFT_0218 0.51 -0.5
Or see this region's nucleotide sequence