Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0891

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0890 and B158DRAFT_0891 are separated by 248 nucleotidesB158DRAFT_0891 and B158DRAFT_0892 are separated by 40 nucleotides B158DRAFT_0890: B158DRAFT_0890 - Phosphate-selective porin, at 909,902 to 911,038 _0890 B158DRAFT_0891: B158DRAFT_0891 - ABC-type uncharacterized transport system, permease component, at 911,287 to 913,527 _0891 B158DRAFT_0892: B158DRAFT_0892 - phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1), at 913,568 to 915,175 _0892 Position (kb) 911 912 913 914Strain fitness (log2 ratio) -3 -2 -1 0 1at 910.456 kb on + strand, within B158DRAFT_0890at 910.731 kb on + strand, within B158DRAFT_0890at 910.731 kb on + strand, within B158DRAFT_0890at 910.912 kb on - strand, within B158DRAFT_0890at 910.997 kb on + strandat 911.328 kb on - strandat 911.398 kb on - strandat 911.398 kb on - strandat 911.537 kb on - strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 912.165 kb on - strand, within B158DRAFT_0891at 912.207 kb on - strand, within B158DRAFT_0891at 912.207 kb on - strand, within B158DRAFT_0891at 912.230 kb on + strand, within B158DRAFT_0891at 912.230 kb on + strand, within B158DRAFT_0891at 912.238 kb on - strand, within B158DRAFT_0891at 912.319 kb on - strand, within B158DRAFT_0891at 912.530 kb on + strand, within B158DRAFT_0891at 912.895 kb on - strand, within B158DRAFT_0891at 913.058 kb on + strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.076 kb on + strand, within B158DRAFT_0891at 913.081 kb on - strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.438 kb on + strandat 913.439 kb on + strandat 913.690 kb on + strandat 913.934 kb on + strand, within B158DRAFT_0892at 914.097 kb on + strand, within B158DRAFT_0892at 914.138 kb on + strand, within B158DRAFT_0892at 914.146 kb on - strand, within B158DRAFT_0892at 914.149 kb on + strand, within B158DRAFT_0892at 914.230 kb on + strand, within B158DRAFT_0892at 914.238 kb on - strand, within B158DRAFT_0892

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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910,456 + B158DRAFT_0890 0.49 -0.1
910,731 + B158DRAFT_0890 0.73 -0.8
910,731 + B158DRAFT_0890 0.73 -0.3
910,912 - B158DRAFT_0890 0.89 -0.4
910,997 + -1.0
911,328 - -2.4
911,398 - -1.2
911,398 - +0.5
911,537 - B158DRAFT_0891 0.11 -0.9
911,807 + B158DRAFT_0891 0.23 -1.0
911,807 + B158DRAFT_0891 0.23 -0.3
911,807 + B158DRAFT_0891 0.23 -1.7
911,815 - B158DRAFT_0891 0.24 -3.1
911,815 - B158DRAFT_0891 0.24 -0.9
911,815 - B158DRAFT_0891 0.24 +0.5
911,815 - B158DRAFT_0891 0.24 +0.7
911,815 - B158DRAFT_0891 0.24 +0.5
912,165 - B158DRAFT_0891 0.39 -0.5
912,207 - B158DRAFT_0891 0.41 -1.9
912,207 - B158DRAFT_0891 0.41 -0.1
912,230 + B158DRAFT_0891 0.42 -1.3
912,230 + B158DRAFT_0891 0.42 -2.4
912,238 - B158DRAFT_0891 0.42 -1.0
912,319 - B158DRAFT_0891 0.46 -0.5
912,530 + B158DRAFT_0891 0.55 -0.4
912,895 - B158DRAFT_0891 0.72 -1.2
913,058 + B158DRAFT_0891 0.79 -0.7
913,066 - B158DRAFT_0891 0.79 -1.9
913,066 - B158DRAFT_0891 0.79 -2.1
913,066 - B158DRAFT_0891 0.79 -1.3
913,076 + B158DRAFT_0891 0.80 -2.7
913,081 - B158DRAFT_0891 0.80 -3.1
913,207 + B158DRAFT_0891 0.86 -2.4
913,207 + B158DRAFT_0891 0.86 -0.2
913,207 + B158DRAFT_0891 0.86 -0.4
913,438 + -0.1
913,439 + -0.6
913,690 + -1.4
913,934 + B158DRAFT_0892 0.23 -1.8
914,097 + B158DRAFT_0892 0.33 -0.7
914,138 + B158DRAFT_0892 0.35 -0.2
914,146 - B158DRAFT_0892 0.36 -1.9
914,149 + B158DRAFT_0892 0.36 -2.7
914,230 + B158DRAFT_0892 0.41 -1.3
914,238 - B158DRAFT_0892 0.42 -1.0

Or see this region's nucleotide sequence