Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0533

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0531 and B158DRAFT_0532 are separated by 197 nucleotidesB158DRAFT_0532 and B158DRAFT_0533 are separated by 42 nucleotidesB158DRAFT_0533 and B158DRAFT_0534 are separated by 12 nucleotides B158DRAFT_0531: B158DRAFT_0531 - hypothetical protein, at 537,842 to 538,039 _0531 B158DRAFT_0532: B158DRAFT_0532 - Uncharacterized protein conserved in bacteria, at 538,237 to 538,788 _0532 B158DRAFT_0533: B158DRAFT_0533 - Xaa-Pro aminopeptidase, at 538,831 to 540,150 _0533 B158DRAFT_0534: B158DRAFT_0534 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase, at 540,163 to 541,401 _0534 Position (kb) 538 539 540 541Strain fitness (log2 ratio) -2 -1 0 1at 538.124 kb on - strandat 538.159 kb on + strandat 538.160 kb on + strandat 538.175 kb on - strandat 538.191 kb on + strandat 538.255 kb on + strandat 538.305 kb on - strand, within B158DRAFT_0532at 538.321 kb on - strand, within B158DRAFT_0532at 538.396 kb on - strand, within B158DRAFT_0532at 538.439 kb on + strand, within B158DRAFT_0532at 538.469 kb on - strand, within B158DRAFT_0532at 538.493 kb on - strand, within B158DRAFT_0532at 538.516 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.561 kb on + strand, within B158DRAFT_0532at 538.620 kb on - strand, within B158DRAFT_0532at 538.708 kb on - strand, within B158DRAFT_0532at 538.754 kb on + strandat 538.788 kb on + strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.799 kb on + strandat 538.817 kb on + strandat 538.825 kb on - strandat 538.882 kb on + strandat 538.931 kb on + strandat 538.931 kb on + strandat 538.934 kb on - strandat 538.939 kb on - strandat 538.944 kb on - strandat 539.003 kb on - strand, within B158DRAFT_0533at 539.003 kb on - strand, within B158DRAFT_0533at 539.024 kb on + strand, within B158DRAFT_0533at 539.106 kb on + strand, within B158DRAFT_0533at 539.111 kb on - strand, within B158DRAFT_0533at 539.114 kb on - strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.132 kb on - strand, within B158DRAFT_0533at 539.132 kb on - strand, within B158DRAFT_0533at 539.276 kb on - strand, within B158DRAFT_0533at 539.276 kb on - strand, within B158DRAFT_0533at 539.286 kb on - strand, within B158DRAFT_0533at 539.331 kb on - strand, within B158DRAFT_0533at 539.400 kb on + strand, within B158DRAFT_0533at 539.403 kb on - strand, within B158DRAFT_0533at 539.415 kb on + strand, within B158DRAFT_0533at 539.424 kb on - strand, within B158DRAFT_0533at 539.451 kb on + strand, within B158DRAFT_0533at 539.493 kb on + strand, within B158DRAFT_0533at 539.540 kb on + strand, within B158DRAFT_0533at 539.564 kb on + strand, within B158DRAFT_0533at 539.578 kb on + strand, within B158DRAFT_0533at 539.592 kb on - strand, within B158DRAFT_0533at 539.669 kb on + strand, within B158DRAFT_0533at 539.674 kb on + strand, within B158DRAFT_0533at 539.680 kb on + strand, within B158DRAFT_0533at 539.688 kb on + strand, within B158DRAFT_0533at 539.729 kb on + strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.778 kb on + strand, within B158DRAFT_0533at 539.885 kb on + strand, within B158DRAFT_0533at 539.891 kb on + strand, within B158DRAFT_0533at 539.899 kb on - strand, within B158DRAFT_0533at 539.934 kb on + strand, within B158DRAFT_0533at 539.942 kb on - strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.069 kb on + strandat 540.070 kb on + strandat 540.070 kb on + strandat 540.078 kb on - strandat 540.078 kb on - strandat 540.084 kb on + strandat 540.084 kb on + strandat 540.084 kb on + strandat 540.123 kb on + strandat 540.123 kb on + strandat 540.123 kb on + strandat 540.130 kb on + strandat 540.135 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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538,124 - -0.9
538,159 + -0.3
538,160 + +0.4
538,175 - +0.4
538,191 + +0.2
538,255 + +0.0
538,305 - B158DRAFT_0532 0.12 +0.4
538,321 - B158DRAFT_0532 0.15 +0.8
538,396 - B158DRAFT_0532 0.29 +0.5
538,439 + B158DRAFT_0532 0.37 +0.4
538,469 - B158DRAFT_0532 0.42 +1.2
538,493 - B158DRAFT_0532 0.46 +0.2
538,516 - B158DRAFT_0532 0.51 +0.6
538,529 - B158DRAFT_0532 0.53 +0.4
538,529 - B158DRAFT_0532 0.53 +0.6
538,529 - B158DRAFT_0532 0.53 +0.6
538,561 + B158DRAFT_0532 0.59 -0.3
538,620 - B158DRAFT_0532 0.69 +0.1
538,708 - B158DRAFT_0532 0.85 -0.0
538,754 + -0.5
538,788 + -0.2
538,797 - +0.5
538,797 - +0.8
538,797 - +0.7
538,799 + -0.1
538,817 + -0.1
538,825 - +0.5
538,882 + +0.3
538,931 + +0.9
538,931 + +1.0
538,934 - +0.0
538,939 - +0.6
538,944 - +0.8
539,003 - B158DRAFT_0533 0.13 +0.6
539,003 - B158DRAFT_0533 0.13 +0.6
539,024 + B158DRAFT_0533 0.15 +0.4
539,106 + B158DRAFT_0533 0.21 +0.6
539,111 - B158DRAFT_0533 0.21 +0.7
539,114 - B158DRAFT_0533 0.21 +0.6
539,124 + B158DRAFT_0533 0.22 +0.7
539,124 + B158DRAFT_0533 0.22 +0.4
539,124 + B158DRAFT_0533 0.22 +0.6
539,132 - B158DRAFT_0533 0.23 -0.0
539,132 - B158DRAFT_0533 0.23 +0.2
539,276 - B158DRAFT_0533 0.34 -0.6
539,276 - B158DRAFT_0533 0.34 +0.2
539,286 - B158DRAFT_0533 0.34 +0.1
539,331 - B158DRAFT_0533 0.38 +0.7
539,400 + B158DRAFT_0533 0.43 +0.6
539,403 - B158DRAFT_0533 0.43 +0.2
539,415 + B158DRAFT_0533 0.44 +0.6
539,424 - B158DRAFT_0533 0.45 -0.1
539,451 + B158DRAFT_0533 0.47 +0.6
539,493 + B158DRAFT_0533 0.50 +1.1
539,540 + B158DRAFT_0533 0.54 +1.1
539,564 + B158DRAFT_0533 0.56 +1.4
539,578 + B158DRAFT_0533 0.57 +0.7
539,592 - B158DRAFT_0533 0.58 -1.7
539,669 + B158DRAFT_0533 0.63 +0.8
539,674 + B158DRAFT_0533 0.64 +0.9
539,680 + B158DRAFT_0533 0.64 +0.7
539,688 + B158DRAFT_0533 0.65 +0.8
539,729 + B158DRAFT_0533 0.68 +0.6
539,753 - B158DRAFT_0533 0.70 +0.1
539,753 - B158DRAFT_0533 0.70 -2.3
539,778 + B158DRAFT_0533 0.72 +0.8
539,885 + B158DRAFT_0533 0.80 +0.4
539,891 + B158DRAFT_0533 0.80 +0.5
539,899 - B158DRAFT_0533 0.81 -1.0
539,934 + B158DRAFT_0533 0.84 +0.7
539,942 - B158DRAFT_0533 0.84 -0.4
539,994 + B158DRAFT_0533 0.88 +0.6
539,994 + B158DRAFT_0533 0.88 +0.5
539,994 + B158DRAFT_0533 0.88 +1.0
539,994 + B158DRAFT_0533 0.88 +0.0
540,002 - B158DRAFT_0533 0.89 +0.7
540,002 - B158DRAFT_0533 0.89 +0.5
540,002 - B158DRAFT_0533 0.89 +0.6
540,069 + +0.5
540,070 + +0.3
540,070 + +0.7
540,078 - -1.1
540,078 - -0.9
540,084 + +0.8
540,084 + +0.7
540,084 + +0.8
540,123 + -0.2
540,123 + -0.4
540,123 + +0.2
540,130 + -0.0
540,135 + +0.1

Or see this region's nucleotide sequence