Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0458

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0457 and B158DRAFT_0458 are separated by 4 nucleotidesB158DRAFT_0458 and B158DRAFT_0459 are separated by 8 nucleotides B158DRAFT_0457: B158DRAFT_0457 - Zn-dependent oligopeptidases, at 457,970 to 460,015 _0457 B158DRAFT_0458: B158DRAFT_0458 - cytidyltransferase-related domain, at 460,020 to 460,421 _0458 B158DRAFT_0459: B158DRAFT_0459 - Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC, at 460,430 to 461,485 _0459 Position (kb) 460 461Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 459.028 kb on + strand, within B158DRAFT_0457at 459.028 kb on + strand, within B158DRAFT_0457at 459.028 kb on + strand, within B158DRAFT_0457at 459.033 kb on + strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.036 kb on - strand, within B158DRAFT_0457at 459.078 kb on + strand, within B158DRAFT_0457at 459.078 kb on + strand, within B158DRAFT_0457at 459.086 kb on - strand, within B158DRAFT_0457at 459.158 kb on + strand, within B158DRAFT_0457at 459.172 kb on - strand, within B158DRAFT_0457at 459.206 kb on + strand, within B158DRAFT_0457at 459.214 kb on - strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.300 kb on + strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.308 kb on - strand, within B158DRAFT_0457at 459.319 kb on + strand, within B158DRAFT_0457at 459.327 kb on - strand, within B158DRAFT_0457at 459.383 kb on + strand, within B158DRAFT_0457at 459.418 kb on - strand, within B158DRAFT_0457at 459.464 kb on + strand, within B158DRAFT_0457at 459.472 kb on - strand, within B158DRAFT_0457at 459.529 kb on - strand, within B158DRAFT_0457at 459.575 kb on + strand, within B158DRAFT_0457at 459.575 kb on + strand, within B158DRAFT_0457at 459.578 kb on - strand, within B158DRAFT_0457at 459.580 kb on + strand, within B158DRAFT_0457at 459.588 kb on - strand, within B158DRAFT_0457at 459.593 kb on - strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.595 kb on + strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.603 kb on - strand, within B158DRAFT_0457at 459.637 kb on - strand, within B158DRAFT_0457at 459.642 kb on - strand, within B158DRAFT_0457at 459.660 kb on + strand, within B158DRAFT_0457at 459.674 kb on + strand, within B158DRAFT_0457at 459.696 kb on - strand, within B158DRAFT_0457at 459.701 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.749 kb on + strand, within B158DRAFT_0457at 459.757 kb on - strand, within B158DRAFT_0457at 459.774 kb on - strand, within B158DRAFT_0457at 459.910 kb on + strandat 459.910 kb on + strandat 459.918 kb on - strandat 459.918 kb on - strandat 459.918 kb on - strandat 459.918 kb on - strandat 460.038 kb on - strandat 460.233 kb on + strand, within B158DRAFT_0458at 460.233 kb on + strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.241 kb on - strand, within B158DRAFT_0458at 460.330 kb on - strand, within B158DRAFT_0458at 460.334 kb on + strand, within B158DRAFT_0458at 460.391 kb on + strandat 460.399 kb on + strandat 460.428 kb on + strandat 460.503 kb on + strandat 460.536 kb on + strand, within B158DRAFT_0459at 460.611 kb on + strand, within B158DRAFT_0459at 460.732 kb on + strand, within B158DRAFT_0459at 460.787 kb on + strand, within B158DRAFT_0459at 460.795 kb on - strand, within B158DRAFT_0459at 460.833 kb on - strand, within B158DRAFT_0459at 460.833 kb on - strand, within B158DRAFT_0459at 460.877 kb on - strand, within B158DRAFT_0459at 460.893 kb on + strand, within B158DRAFT_0459at 460.929 kb on + strand, within B158DRAFT_0459at 461.043 kb on + strand, within B158DRAFT_0459at 461.056 kb on + strand, within B158DRAFT_0459at 461.064 kb on - strand, within B158DRAFT_0459at 461.081 kb on + strand, within B158DRAFT_0459at 461.090 kb on - strand, within B158DRAFT_0459at 461.191 kb on + strand, within B158DRAFT_0459at 461.192 kb on - strand, within B158DRAFT_0459at 461.226 kb on + strand, within B158DRAFT_0459at 461.231 kb on + strand, within B158DRAFT_0459at 461.266 kb on + strand, within B158DRAFT_0459at 461.274 kb on - strand, within B158DRAFT_0459at 461.394 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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459,028 + B158DRAFT_0457 0.52 +0.2
459,028 + B158DRAFT_0457 0.52 +0.4
459,028 + B158DRAFT_0457 0.52 +0.2
459,033 + B158DRAFT_0457 0.52 -0.3
459,036 - B158DRAFT_0457 0.52 -0.2
459,036 - B158DRAFT_0457 0.52 +0.5
459,036 - B158DRAFT_0457 0.52 +0.1
459,036 - B158DRAFT_0457 0.52 +0.1
459,036 - B158DRAFT_0457 0.52 +0.1
459,036 - B158DRAFT_0457 0.52 +0.3
459,036 - B158DRAFT_0457 0.52 +0.0
459,078 + B158DRAFT_0457 0.54 -0.1
459,078 + B158DRAFT_0457 0.54 -0.2
459,086 - B158DRAFT_0457 0.55 +0.3
459,158 + B158DRAFT_0457 0.58 +0.3
459,172 - B158DRAFT_0457 0.59 +0.6
459,206 + B158DRAFT_0457 0.60 +0.2
459,214 - B158DRAFT_0457 0.61 +0.8
459,300 + B158DRAFT_0457 0.65 +0.5
459,300 + B158DRAFT_0457 0.65 +0.1
459,300 + B158DRAFT_0457 0.65 +0.3
459,308 - B158DRAFT_0457 0.65 -0.1
459,308 - B158DRAFT_0457 0.65 +0.2
459,308 - B158DRAFT_0457 0.65 +0.6
459,319 + B158DRAFT_0457 0.66 +0.6
459,327 - B158DRAFT_0457 0.66 -0.2
459,383 + B158DRAFT_0457 0.69 +0.1
459,418 - B158DRAFT_0457 0.71 +0.1
459,464 + B158DRAFT_0457 0.73 +0.3
459,472 - B158DRAFT_0457 0.73 +0.0
459,529 - B158DRAFT_0457 0.76 -0.1
459,575 + B158DRAFT_0457 0.78 -0.1
459,575 + B158DRAFT_0457 0.78 -0.0
459,578 - B158DRAFT_0457 0.79 +0.1
459,580 + B158DRAFT_0457 0.79 -0.8
459,588 - B158DRAFT_0457 0.79 +0.1
459,593 - B158DRAFT_0457 0.79 -0.0
459,595 + B158DRAFT_0457 0.79 -0.3
459,595 + B158DRAFT_0457 0.79 +0.2
459,595 + B158DRAFT_0457 0.79 +0.3
459,595 + B158DRAFT_0457 0.79 +0.1
459,595 + B158DRAFT_0457 0.79 -0.3
459,595 + B158DRAFT_0457 0.79 +0.3
459,595 + B158DRAFT_0457 0.79 -0.2
459,603 - B158DRAFT_0457 0.80 +0.0
459,603 - B158DRAFT_0457 0.80 +0.3
459,603 - B158DRAFT_0457 0.80 -0.3
459,603 - B158DRAFT_0457 0.80 +0.3
459,603 - B158DRAFT_0457 0.80 +0.7
459,603 - B158DRAFT_0457 0.80 +0.5
459,603 - B158DRAFT_0457 0.80 +0.3
459,603 - B158DRAFT_0457 0.80 -0.1
459,603 - B158DRAFT_0457 0.80 +0.3
459,603 - B158DRAFT_0457 0.80 -0.7
459,603 - B158DRAFT_0457 0.80 -0.3
459,603 - B158DRAFT_0457 0.80 -2.0
459,603 - B158DRAFT_0457 0.80 -0.0
459,603 - B158DRAFT_0457 0.80 -0.5
459,637 - B158DRAFT_0457 0.81 +0.5
459,642 - B158DRAFT_0457 0.82 -0.7
459,660 + B158DRAFT_0457 0.83 -0.1
459,674 + B158DRAFT_0457 0.83 +0.3
459,696 - B158DRAFT_0457 0.84 +0.2
459,701 + B158DRAFT_0457 0.85 +1.3
459,749 + B158DRAFT_0457 0.87 +0.1
459,749 + B158DRAFT_0457 0.87 -0.2
459,749 + B158DRAFT_0457 0.87 +0.2
459,757 - B158DRAFT_0457 0.87 +0.6
459,774 - B158DRAFT_0457 0.88 +0.5
459,910 + +0.2
459,910 + +0.2
459,918 - -0.3
459,918 - -0.1
459,918 - +0.2
459,918 - -0.4
460,038 - -2.1
460,233 + B158DRAFT_0458 0.53 -2.1
460,233 + B158DRAFT_0458 0.53 -0.7
460,241 - B158DRAFT_0458 0.55 -3.9
460,241 - B158DRAFT_0458 0.55 -2.9
460,241 - B158DRAFT_0458 0.55 -4.4
460,241 - B158DRAFT_0458 0.55 -2.5
460,330 - B158DRAFT_0458 0.77 -2.7
460,334 + B158DRAFT_0458 0.78 -2.7
460,391 + -1.7
460,399 + -1.8
460,428 + -1.7
460,503 + -3.2
460,536 + B158DRAFT_0459 0.10 -1.7
460,611 + B158DRAFT_0459 0.17 -0.8
460,732 + B158DRAFT_0459 0.29 -1.1
460,787 + B158DRAFT_0459 0.34 -2.3
460,795 - B158DRAFT_0459 0.35 -1.4
460,833 - B158DRAFT_0459 0.38 -1.0
460,833 - B158DRAFT_0459 0.38 -1.0
460,877 - B158DRAFT_0459 0.42 -1.5
460,893 + B158DRAFT_0459 0.44 -1.9
460,929 + B158DRAFT_0459 0.47 -1.9
461,043 + B158DRAFT_0459 0.58 -1.2
461,056 + B158DRAFT_0459 0.59 -0.6
461,064 - B158DRAFT_0459 0.60 -0.9
461,081 + B158DRAFT_0459 0.62 -1.3
461,090 - B158DRAFT_0459 0.62 -2.1
461,191 + B158DRAFT_0459 0.72 -1.3
461,192 - B158DRAFT_0459 0.72 -1.1
461,226 + B158DRAFT_0459 0.75 -2.2
461,231 + B158DRAFT_0459 0.76 -1.5
461,266 + B158DRAFT_0459 0.79 -2.6
461,274 - B158DRAFT_0459 0.80 -0.9
461,394 - -1.0

Or see this region's nucleotide sequence