Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2531

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2529 and B158DRAFT_2530 are separated by 27 nucleotidesB158DRAFT_2530 and B158DRAFT_2531 are separated by 87 nucleotidesB158DRAFT_2531 and B158DRAFT_2532 are separated by 57 nucleotides B158DRAFT_2529: B158DRAFT_2529 - NAD synthase, at 719,161 to 720,783 _2529 B158DRAFT_2530: B158DRAFT_2530 - nitrogen regulatory protein P-II family, at 720,811 to 721,149 _2530 B158DRAFT_2531: B158DRAFT_2531 - Beta-barrel assembly machine subunit BamD, at 721,237 to 722,043 _2531 B158DRAFT_2532: B158DRAFT_2532 - Pseudouridylate synthases, 23S RNA-specific, at 722,101 to 723,075 _2532 Position (kb) 721 722 723Strain fitness (log2 ratio) -1 0 1 2at 720.749 kb on + strandat 720.749 kb on + strandat 720.749 kb on + strandat 720.768 kb on + strandat 720.768 kb on + strandat 720.768 kb on + strandat 720.776 kb on - strandat 720.776 kb on - strandat 720.786 kb on - strandat 720.865 kb on + strand, within B158DRAFT_2530at 721.068 kb on - strand, within B158DRAFT_2530at 721.123 kb on + strandat 721.196 kb on - strandat 721.196 kb on - strandat 721.230 kb on - strandat 721.258 kb on - strandat 722.114 kb on + strandat 722.130 kb on + strandat 722.134 kb on - strandat 722.159 kb on + strandat 722.271 kb on + strand, within B158DRAFT_2532at 722.285 kb on + strand, within B158DRAFT_2532at 722.331 kb on + strand, within B158DRAFT_2532at 722.339 kb on - strand, within B158DRAFT_2532at 722.458 kb on + strand, within B158DRAFT_2532at 722.466 kb on + strand, within B158DRAFT_2532at 722.466 kb on + strand, within B158DRAFT_2532at 722.471 kb on + strand, within B158DRAFT_2532at 722.471 kb on + strand, within B158DRAFT_2532at 722.474 kb on - strand, within B158DRAFT_2532at 722.526 kb on + strand, within B158DRAFT_2532at 722.672 kb on + strand, within B158DRAFT_2532at 722.672 kb on - strand, within B158DRAFT_2532at 722.723 kb on - strand, within B158DRAFT_2532at 722.734 kb on - strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.803 kb on + strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.811 kb on - strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.854 kb on + strand, within B158DRAFT_2532at 722.862 kb on - strand, within B158DRAFT_2532at 722.862 kb on - strand, within B158DRAFT_2532at 722.875 kb on + strand, within B158DRAFT_2532at 722.878 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.881 kb on - strand, within B158DRAFT_2532at 722.922 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.957 kb on + strand, within B158DRAFT_2532at 722.965 kb on - strand, within B158DRAFT_2532at 722.965 kb on - strand, within B158DRAFT_2532at 722.967 kb on + strand, within B158DRAFT_2532at 722.967 kb on + strand, within B158DRAFT_2532

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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720,749 + -0.0
720,749 + -0.1
720,749 + -0.0
720,768 + +0.8
720,768 + +0.1
720,768 + -0.2
720,776 - -0.8
720,776 - -0.4
720,786 - -0.4
720,865 + B158DRAFT_2530 0.16 -0.7
721,068 - B158DRAFT_2530 0.76 -0.6
721,123 + -0.6
721,196 - +0.7
721,196 - +0.3
721,230 - +0.2
721,258 - +0.2
722,114 + +1.1
722,130 + +0.6
722,134 - +0.6
722,159 + +1.1
722,271 + B158DRAFT_2532 0.17 +0.9
722,285 + B158DRAFT_2532 0.19 +1.1
722,331 + B158DRAFT_2532 0.24 +1.3
722,339 - B158DRAFT_2532 0.24 +0.6
722,458 + B158DRAFT_2532 0.37 -0.4
722,466 + B158DRAFT_2532 0.37 +1.2
722,466 + B158DRAFT_2532 0.37 +1.2
722,471 + B158DRAFT_2532 0.38 +1.6
722,471 + B158DRAFT_2532 0.38 +1.0
722,474 - B158DRAFT_2532 0.38 +1.0
722,526 + B158DRAFT_2532 0.44 +0.8
722,672 + B158DRAFT_2532 0.59 +0.7
722,672 - B158DRAFT_2532 0.59 +1.0
722,723 - B158DRAFT_2532 0.64 +1.9
722,734 - B158DRAFT_2532 0.65 +1.1
722,803 + B158DRAFT_2532 0.72 +1.0
722,803 + B158DRAFT_2532 0.72 +1.3
722,803 + B158DRAFT_2532 0.72 +0.9
722,803 + B158DRAFT_2532 0.72 +0.6
722,811 - B158DRAFT_2532 0.73 +1.1
722,811 - B158DRAFT_2532 0.73 +0.6
722,811 - B158DRAFT_2532 0.73 +0.9
722,854 + B158DRAFT_2532 0.77 +1.2
722,854 + B158DRAFT_2532 0.77 +1.4
722,854 + B158DRAFT_2532 0.77 +1.2
722,854 + B158DRAFT_2532 0.77 +1.0
722,854 + B158DRAFT_2532 0.77 +1.1
722,862 - B158DRAFT_2532 0.78 +0.9
722,862 - B158DRAFT_2532 0.78 +0.6
722,875 + B158DRAFT_2532 0.79 +1.6
722,878 - B158DRAFT_2532 0.80 +0.4
722,881 - B158DRAFT_2532 0.80 +0.4
722,881 - B158DRAFT_2532 0.80 +0.9
722,881 - B158DRAFT_2532 0.80 +0.3
722,922 + B158DRAFT_2532 0.84 +1.3
722,957 + B158DRAFT_2532 0.88 +1.1
722,957 + B158DRAFT_2532 0.88 +1.3
722,957 + B158DRAFT_2532 0.88 +1.4
722,957 + B158DRAFT_2532 0.88 +1.3
722,957 + B158DRAFT_2532 0.88 +0.6
722,965 - B158DRAFT_2532 0.89 +0.7
722,965 - B158DRAFT_2532 0.89 +0.6
722,967 + B158DRAFT_2532 0.89 +1.6
722,967 + B158DRAFT_2532 0.89 +0.9

Or see this region's nucleotide sequence