Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2424

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2423 and B158DRAFT_2424 are separated by 467 nucleotidesB158DRAFT_2424 and B158DRAFT_2425 overlap by 11 nucleotides B158DRAFT_2423: B158DRAFT_2423 - ATPases involved in chromosome partitioning, at 595,564 to 596,274 _2423 B158DRAFT_2424: B158DRAFT_2424 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 596,742 to 597,776 _2424 B158DRAFT_2425: B158DRAFT_2425 - anthranilate synthase, component I (EC 4.1.3.27), at 597,766 to 599,355 _2425 Position (kb) 596 597 598Strain fitness (log2 ratio) -1 0 1at 595.762 kb on + strand, within B158DRAFT_2423at 595.770 kb on - strand, within B158DRAFT_2423at 595.865 kb on - strand, within B158DRAFT_2423at 595.898 kb on + strand, within B158DRAFT_2423at 595.905 kb on - strand, within B158DRAFT_2423at 595.930 kb on + strand, within B158DRAFT_2423at 595.930 kb on + strand, within B158DRAFT_2423at 595.938 kb on - strand, within B158DRAFT_2423at 595.938 kb on - strand, within B158DRAFT_2423at 596.116 kb on - strand, within B158DRAFT_2423at 596.117 kb on + strand, within B158DRAFT_2423at 596.117 kb on + strand, within B158DRAFT_2423at 596.125 kb on - strand, within B158DRAFT_2423at 596.127 kb on + strand, within B158DRAFT_2423at 596.127 kb on + strand, within B158DRAFT_2423at 596.217 kb on + strandat 596.225 kb on - strandat 596.293 kb on + strandat 596.775 kb on - strandat 596.823 kb on + strandat 596.838 kb on + strandat 596.924 kb on + strand, within B158DRAFT_2424at 596.971 kb on + strand, within B158DRAFT_2424at 596.978 kb on + strand, within B158DRAFT_2424at 596.996 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.021 kb on - strand, within B158DRAFT_2424at 597.079 kb on - strand, within B158DRAFT_2424at 597.108 kb on + strand, within B158DRAFT_2424at 597.114 kb on - strand, within B158DRAFT_2424at 597.146 kb on + strand, within B158DRAFT_2424at 597.146 kb on + strand, within B158DRAFT_2424at 597.202 kb on + strand, within B158DRAFT_2424at 597.308 kb on + strand, within B158DRAFT_2424at 597.316 kb on - strand, within B158DRAFT_2424at 597.320 kb on + strand, within B158DRAFT_2424at 597.328 kb on - strand, within B158DRAFT_2424at 597.436 kb on - strand, within B158DRAFT_2424at 597.559 kb on + strand, within B158DRAFT_2424at 597.559 kb on + strand, within B158DRAFT_2424at 597.567 kb on - strand, within B158DRAFT_2424at 597.567 kb on - strand, within B158DRAFT_2424at 597.586 kb on - strand, within B158DRAFT_2424at 597.613 kb on + strand, within B158DRAFT_2424at 597.672 kb on + strand, within B158DRAFT_2424at 597.680 kb on - strandat 597.731 kb on - strandat 597.771 kb on + strandat 597.889 kb on + strandat 597.897 kb on - strandat 597.915 kb on - strandat 598.220 kb on + strand, within B158DRAFT_2425at 598.228 kb on - strand, within B158DRAFT_2425at 598.278 kb on + strand, within B158DRAFT_2425at 598.351 kb on + strand, within B158DRAFT_2425at 598.481 kb on - strand, within B158DRAFT_2425at 598.549 kb on - strand, within B158DRAFT_2425at 598.549 kb on - strand, within B158DRAFT_2425at 598.647 kb on + strand, within B158DRAFT_2425at 598.655 kb on - strand, within B158DRAFT_2425

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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595,762 + B158DRAFT_2423 0.28 +0.1
595,770 - B158DRAFT_2423 0.29 -1.1
595,865 - B158DRAFT_2423 0.42 -0.0
595,898 + B158DRAFT_2423 0.47 -0.3
595,905 - B158DRAFT_2423 0.48 -0.6
595,930 + B158DRAFT_2423 0.51 -0.2
595,930 + B158DRAFT_2423 0.51 -0.3
595,938 - B158DRAFT_2423 0.53 -0.4
595,938 - B158DRAFT_2423 0.53 -0.1
596,116 - B158DRAFT_2423 0.78 -0.6
596,117 + B158DRAFT_2423 0.78 +0.2
596,117 + B158DRAFT_2423 0.78 +0.1
596,125 - B158DRAFT_2423 0.79 -0.1
596,127 + B158DRAFT_2423 0.79 -1.0
596,127 + B158DRAFT_2423 0.79 -0.9
596,217 + -0.4
596,225 - -0.2
596,293 + +0.4
596,775 - -0.3
596,823 + -0.2
596,838 + -0.8
596,924 + B158DRAFT_2424 0.18 -0.0
596,971 + B158DRAFT_2424 0.22 -0.2
596,978 + B158DRAFT_2424 0.23 -0.6
596,996 + B158DRAFT_2424 0.25 +0.6
597,013 + B158DRAFT_2424 0.26 +0.0
597,013 + B158DRAFT_2424 0.26 -0.2
597,013 + B158DRAFT_2424 0.26 -0.4
597,013 + B158DRAFT_2424 0.26 -0.2
597,013 + B158DRAFT_2424 0.26 -0.3
597,013 + B158DRAFT_2424 0.26 -1.0
597,013 + B158DRAFT_2424 0.26 -0.3
597,013 + B158DRAFT_2424 0.26 -0.1
597,021 - B158DRAFT_2424 0.27 -1.4
597,079 - B158DRAFT_2424 0.33 +0.8
597,108 + B158DRAFT_2424 0.35 -0.1
597,114 - B158DRAFT_2424 0.36 -0.6
597,146 + B158DRAFT_2424 0.39 -1.7
597,146 + B158DRAFT_2424 0.39 +0.1
597,202 + B158DRAFT_2424 0.44 -0.2
597,308 + B158DRAFT_2424 0.55 +0.5
597,316 - B158DRAFT_2424 0.55 -0.6
597,320 + B158DRAFT_2424 0.56 +0.0
597,328 - B158DRAFT_2424 0.57 +0.0
597,436 - B158DRAFT_2424 0.67 -0.8
597,559 + B158DRAFT_2424 0.79 +0.1
597,559 + B158DRAFT_2424 0.79 +0.1
597,567 - B158DRAFT_2424 0.80 -0.4
597,567 - B158DRAFT_2424 0.80 -0.5
597,586 - B158DRAFT_2424 0.82 -1.0
597,613 + B158DRAFT_2424 0.84 -0.3
597,672 + B158DRAFT_2424 0.90 +0.2
597,680 - -0.3
597,731 - -0.9
597,771 + -1.0
597,889 + -0.6
597,897 - -1.0
597,915 - -1.1
598,220 + B158DRAFT_2425 0.29 -0.9
598,228 - B158DRAFT_2425 0.29 -0.7
598,278 + B158DRAFT_2425 0.32 -1.3
598,351 + B158DRAFT_2425 0.37 +0.1
598,481 - B158DRAFT_2425 0.45 -0.9
598,549 - B158DRAFT_2425 0.49 +1.2
598,549 - B158DRAFT_2425 0.49 -0.4
598,647 + B158DRAFT_2425 0.55 -1.5
598,655 - B158DRAFT_2425 0.56 +0.1

Or see this region's nucleotide sequence