Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2090

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2089 and B158DRAFT_2090 are separated by 76 nucleotidesB158DRAFT_2090 and B158DRAFT_2091 are separated by 27 nucleotidesB158DRAFT_2091 and B158DRAFT_2092 are separated by 105 nucleotides B158DRAFT_2089: B158DRAFT_2089 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7), at 226,000 to 227,259 _2089 B158DRAFT_2090: B158DRAFT_2090 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 227,336 to 228,502 _2090 B158DRAFT_2091: B158DRAFT_2091 - Uncharacterized protein conserved in bacteria, at 228,530 to 229,156 _2091 B158DRAFT_2092: B158DRAFT_2092 - Predicted membrane protein, at 229,262 to 229,948 _2092 Position (kb) 227 228 229Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 227.477 kb on - strand, within B158DRAFT_2090at 227.528 kb on - strand, within B158DRAFT_2090at 227.546 kb on + strand, within B158DRAFT_2090at 227.551 kb on - strand, within B158DRAFT_2090at 227.565 kb on - strand, within B158DRAFT_2090at 227.660 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.717 kb on + strand, within B158DRAFT_2090at 227.728 kb on - strand, within B158DRAFT_2090at 227.804 kb on - strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.824 kb on + strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.947 kb on - strand, within B158DRAFT_2090at 227.949 kb on + strand, within B158DRAFT_2090at 227.981 kb on + strand, within B158DRAFT_2090at 228.041 kb on + strand, within B158DRAFT_2090at 228.093 kb on - strand, within B158DRAFT_2090at 228.103 kb on + strand, within B158DRAFT_2090at 228.106 kb on - strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.245 kb on - strand, within B158DRAFT_2090at 228.256 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.265 kb on + strand, within B158DRAFT_2090at 228.272 kb on - strand, within B158DRAFT_2090at 228.272 kb on - strand, within B158DRAFT_2090at 228.281 kb on + strand, within B158DRAFT_2090at 228.281 kb on + strand, within B158DRAFT_2090at 228.289 kb on - strand, within B158DRAFT_2090at 228.309 kb on + strand, within B158DRAFT_2090at 228.309 kb on + strand, within B158DRAFT_2090at 228.311 kb on - strand, within B158DRAFT_2090at 228.364 kb on + strand, within B158DRAFT_2090at 228.370 kb on - strand, within B158DRAFT_2090at 228.373 kb on + strand, within B158DRAFT_2090at 228.401 kb on - strandat 228.445 kb on + strandat 228.522 kb on - strandat 228.536 kb on + strandat 228.625 kb on - strand, within B158DRAFT_2091at 228.647 kb on - strand, within B158DRAFT_2091at 228.701 kb on + strand, within B158DRAFT_2091at 228.709 kb on - strand, within B158DRAFT_2091at 228.761 kb on + strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.902 kb on - strand, within B158DRAFT_2091at 228.902 kb on - strand, within B158DRAFT_2091at 228.971 kb on + strand, within B158DRAFT_2091at 229.167 kb on + strandat 229.389 kb on + strand, within B158DRAFT_2092

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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227,477 - B158DRAFT_2090 0.12 -2.6
227,528 - B158DRAFT_2090 0.16 -2.0
227,546 + B158DRAFT_2090 0.18 -1.8
227,551 - B158DRAFT_2090 0.18 -2.7
227,565 - B158DRAFT_2090 0.20 -2.1
227,660 + B158DRAFT_2090 0.28 -1.9
227,665 + B158DRAFT_2090 0.28 -2.4
227,665 + B158DRAFT_2090 0.28 -0.8
227,665 + B158DRAFT_2090 0.28 -1.7
227,673 - B158DRAFT_2090 0.29 +0.2
227,673 - B158DRAFT_2090 0.29 -1.9
227,679 + B158DRAFT_2090 0.29 -2.3
227,679 + B158DRAFT_2090 0.29 -2.5
227,679 + B158DRAFT_2090 0.29 -1.5
227,687 - B158DRAFT_2090 0.30 -2.1
227,687 - B158DRAFT_2090 0.30 -3.4
227,717 + B158DRAFT_2090 0.33 -1.9
227,728 - B158DRAFT_2090 0.34 -2.8
227,804 - B158DRAFT_2090 0.40 -2.2
227,817 + B158DRAFT_2090 0.41 -2.3
227,817 + B158DRAFT_2090 0.41 -2.3
227,817 + B158DRAFT_2090 0.41 -2.7
227,817 + B158DRAFT_2090 0.41 -2.8
227,824 + B158DRAFT_2090 0.42 -2.3
227,825 - B158DRAFT_2090 0.42 -2.6
227,825 - B158DRAFT_2090 0.42 -2.6
227,825 - B158DRAFT_2090 0.42 -2.6
227,825 - B158DRAFT_2090 0.42 -2.1
227,825 - B158DRAFT_2090 0.42 -1.8
227,825 - B158DRAFT_2090 0.42 -2.5
227,825 - B158DRAFT_2090 0.42 -3.5
227,825 - B158DRAFT_2090 0.42 -4.2
227,825 - B158DRAFT_2090 0.42 -2.2
227,825 - B158DRAFT_2090 0.42 -2.9
227,825 - B158DRAFT_2090 0.42 -2.6
227,947 - B158DRAFT_2090 0.52 -2.7
227,949 + B158DRAFT_2090 0.53 -2.7
227,981 + B158DRAFT_2090 0.55 -2.7
228,041 + B158DRAFT_2090 0.60 -2.1
228,093 - B158DRAFT_2090 0.65 -2.4
228,103 + B158DRAFT_2090 0.66 -3.2
228,106 - B158DRAFT_2090 0.66 -2.0
228,123 + B158DRAFT_2090 0.67 -1.7
228,123 + B158DRAFT_2090 0.67 -3.5
228,123 + B158DRAFT_2090 0.67 -2.1
228,123 + B158DRAFT_2090 0.67 -2.8
228,123 + B158DRAFT_2090 0.67 -3.9
228,123 + B158DRAFT_2090 0.67 -1.0
228,123 + B158DRAFT_2090 0.67 -2.9
228,123 + B158DRAFT_2090 0.67 -1.9
228,131 - B158DRAFT_2090 0.68 -1.5
228,131 - B158DRAFT_2090 0.68 -2.4
228,131 - B158DRAFT_2090 0.68 -2.6
228,131 - B158DRAFT_2090 0.68 -2.3
228,131 - B158DRAFT_2090 0.68 -2.1
228,131 - B158DRAFT_2090 0.68 -1.3
228,131 - B158DRAFT_2090 0.68 -1.1
228,131 - B158DRAFT_2090 0.68 -1.6
228,131 - B158DRAFT_2090 0.68 -0.7
228,131 - B158DRAFT_2090 0.68 -2.2
228,245 - B158DRAFT_2090 0.78 -3.1
228,256 + B158DRAFT_2090 0.79 -1.1
228,264 + B158DRAFT_2090 0.80 -1.6
228,264 + B158DRAFT_2090 0.80 -1.8
228,264 + B158DRAFT_2090 0.80 -2.8
228,265 + B158DRAFT_2090 0.80 -3.7
228,272 - B158DRAFT_2090 0.80 -1.2
228,272 - B158DRAFT_2090 0.80 -2.4
228,281 + B158DRAFT_2090 0.81 -1.5
228,281 + B158DRAFT_2090 0.81 -1.2
228,289 - B158DRAFT_2090 0.82 -2.2
228,309 + B158DRAFT_2090 0.83 -1.9
228,309 + B158DRAFT_2090 0.83 -1.1
228,311 - B158DRAFT_2090 0.84 -3.5
228,364 + B158DRAFT_2090 0.88 -1.4
228,370 - B158DRAFT_2090 0.89 -2.1
228,373 + B158DRAFT_2090 0.89 -2.5
228,401 - -2.3
228,445 + -1.9
228,522 - +0.1
228,536 + -1.0
228,625 - B158DRAFT_2091 0.15 -0.1
228,647 - B158DRAFT_2091 0.19 +0.4
228,701 + B158DRAFT_2091 0.27 +0.3
228,709 - B158DRAFT_2091 0.29 -0.1
228,761 + B158DRAFT_2091 0.37 -0.8
228,856 - B158DRAFT_2091 0.52 -0.4
228,856 - B158DRAFT_2091 0.52 -0.2
228,856 - B158DRAFT_2091 0.52 +0.2
228,902 - B158DRAFT_2091 0.59 -0.5
228,902 - B158DRAFT_2091 0.59 +0.3
228,971 + B158DRAFT_2091 0.70 -0.3
229,167 + -0.6
229,389 + B158DRAFT_2092 0.18 -0.5

Or see this region's nucleotide sequence